| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is tolQ [C]
Identifier: 78357196
GI number: 78357196
Start: 2198797
End: 2200221
Strand: Direct
Name: tolQ [C]
Synonym: Dde_2153
Alternate gene names: 78357196
Gene position: 2198797-2200221 (Clockwise)
Preceding gene: 78357195
Following gene: 78357197
Centisome position: 58.95
GC content: 54.18
Gene sequence:
>1425_bases ATGAAATACAAAATACTCACACTGGTTACACTGCTGATAACCGCCAGCGTGCCGGCACACGCCCAGTGGTCCGGTGCGGT GGCTGAAACCCGCAAACTGGCTGCGGAAACCCGCTCAGAGGCAGCCAAAACCCGCGACCTGATAACATCGGAAAAAAAAG CTGTGGTGAACGAAAAAGCGCAGCTTGAAAAAGTGATTGCCGCCAAGCACAAGCAGCACGAAGAGCTTAAAGCCAGATAC GAAGCTTTGCTGCAGCAGGAAGCCCGACTGAAAGAGGAGCTGGCGCAGCAGGCCCATGAACTGAAAACCATTGACGGCAC CATCCGCACTTCAGCCAAGCAGGCCAGAGACTATTTTCACGAAAGTCTCACAACACCTGAATTTCCGCATCGTGAACCGG TGCTGAGCGTCATCCTGACTCCGGAAACCTTTCCCGGACTTGAAGGCATAAAAAATCTGCTGCGGCTTTATATGGAAGAG ATGTCCGCCTCAGGACGTGTACAGCTTCGCGAAGGGTCTTTTGTCAATGCTGACGGACGCACAGAAACCGCCCGACTGCT GCGTATAGGCACATTCACAGCGGCCTTTAAAAAACAGGACGGCACTGCCGGATTTCTGCGTCCCCTGCATGAAGGTTCGT TACTGGGCGCTGTTCCGGGAAATCCCGGCTGGACGCTGGGACGCGGAATGCGGGCGTACTTTGAAGGCGAAAGCGATACC TTTCCGGTAGATATTTCCAACGGAGCGGCGCTGGCCAGGCTGGAGCAGGACCAGAAAGGAATATACGAGTGGCTCCAGAC AGGCGGCCTGCTGGTATGGCCCATCATTCTGGTGGGCATCATCGCGCTGGGCCTTGTTATTGAACGTTTTTACACACTGG GCAGGCTGCGCGGAAATTCTGACAGAAACATGCAGACCATACTGTCCATGATTCGTGCCAGAAAATGGCATGAGTGTCAG GAATTCTGCGCGAGGGCTTCCAATTTTCCCACATGCCGTATCATAGGACATACTCTGGGATATATGGGGGCAACCCGCGA GATTATTGAAAACGCTTATCAGGAAGCAATGCTCAAAGAGTTGCCTGTTCTGGAACGCTTTCTGCCCACACTCAGCGTGC TGGCAGCGGTGGCGCCGCTTCTGGGGCTTCTGGGTACCGTCACCGGCATGATCAACACCTTTCAGACAATCACACTGTAC GGTACCGGCGACCCGCGCATGATGTCGGGCGGTATTTCAGAAGCATTGATCACCACTCAGCTGGGACTGGCCGTGGCCGT GCCCATCATGATTCTGCATCACATTCTGGAACGGCGGGTAGATGCTCTGATGGGCGACATGGAAGAAAAAGGAACAAGCT TTACTGTAGCACTGATGCAGCAGGGCCAGATACGACAGGGAGAATCATACGGTGCAGCTGCATGA
Upstream 100 bases:
>100_bases CTCTCGATCAGGATACCGCCCGCACCCTGCACAAAGCTGAAGAAATGGCGGCGCGCAAACGTGCAGTTGAGCTTCTGCAA CTACCCATCGGAAAGGTACA
Downstream 100 bases:
>100_bases TTATCTTGAACAGGTGCTGGTGTATTTTAATGCCGGAGGGCCGACTATGGTTCCTATCATGGCATTCTCGTTTGCCATCT GGCTTATAATATTACTCAAA
Product: TolQ-like transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKYKILTLVTLLITASVPAHAQWSGAVAETRKLAAETRSEAAKTRDLITSEKKAVVNEKAQLEKVIAAKHKQHEELKARY EALLQQEARLKEELAQQAHELKTIDGTIRTSAKQARDYFHESLTTPEFPHREPVLSVILTPETFPGLEGIKNLLRLYMEE MSASGRVQLREGSFVNADGRTETARLLRIGTFTAAFKKQDGTAGFLRPLHEGSLLGAVPGNPGWTLGRGMRAYFEGESDT FPVDISNGAALARLEQDQKGIYEWLQTGGLLVWPIILVGIIALGLVIERFYTLGRLRGNSDRNMQTILSMIRARKWHECQ EFCARASNFPTCRIIGHTLGYMGATREIIENAYQEAMLKELPVLERFLPTLSVLAAVAPLLGLLGTVTGMINTFQTITLY GTGDPRMMSGGISEALITTQLGLAVAVPIMILHHILERRVDALMGDMEEKGTSFTVALMQQGQIRQGESYGAAA
Sequences:
>Translated_474_residues MKYKILTLVTLLITASVPAHAQWSGAVAETRKLAAETRSEAAKTRDLITSEKKAVVNEKAQLEKVIAAKHKQHEELKARY EALLQQEARLKEELAQQAHELKTIDGTIRTSAKQARDYFHESLTTPEFPHREPVLSVILTPETFPGLEGIKNLLRLYMEE MSASGRVQLREGSFVNADGRTETARLLRIGTFTAAFKKQDGTAGFLRPLHEGSLLGAVPGNPGWTLGRGMRAYFEGESDT FPVDISNGAALARLEQDQKGIYEWLQTGGLLVWPIILVGIIALGLVIERFYTLGRLRGNSDRNMQTILSMIRARKWHECQ EFCARASNFPTCRIIGHTLGYMGATREIIENAYQEAMLKELPVLERFLPTLSVLAAVAPLLGLLGTVTGMINTFQTITLY GTGDPRMMSGGISEALITTQLGLAVAVPIMILHHILERRVDALMGDMEEKGTSFTVALMQQGQIRQGESYGAAA >Mature_474_residues MKYKILTLVTLLITASVPAHAQWSGAVAETRKLAAETRSEAAKTRDLITSEKKAVVNEKAQLEKVIAAKHKQHEELKARY EALLQQEARLKEELAQQAHELKTIDGTIRTSAKQARDYFHESLTTPEFPHREPVLSVILTPETFPGLEGIKNLLRLYMEE MSASGRVQLREGSFVNADGRTETARLLRIGTFTAAFKKQDGTAGFLRPLHEGSLLGAVPGNPGWTLGRGMRAYFEGESDT FPVDISNGAALARLEQDQKGIYEWLQTGGLLVWPIILVGIIALGLVIERFYTLGRLRGNSDRNMQTILSMIRARKWHECQ EFCARASNFPTCRIIGHTLGYMGATREIIENAYQEAMLKELPVLERFLPTLSVLAAVAPLLGLLGTVTGMINTFQTITLY GTGDPRMMSGGISEALITTQLGLAVAVPIMILHHILERRVDALMGDMEEKGTSFTVALMQQGQIRQGESYGAAA
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=120, Percent_Identity=32.5, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 52315; Mature: 52315
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKILTLVTLLITASVPAHAQWSGAVAETRKLAAETRSEAAKTRDLITSEKKAVVNEKA CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLEKVIAAKHKQHEELKARYEALLQQEARLKEELAQQAHELKTIDGTIRTSAKQARDYFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLTTPEFPHREPVLSVILTPETFPGLEGIKNLLRLYMEEMSASGRVQLREGSFVNADGR HHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCC TETARLLRIGTFTAAFKKQDGTAGFLRPLHEGSLLGAVPGNPGWTLGRGMRAYFEGESDT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCHHCCCHHHCCCCCCC FPVDISNGAALARLEQDQKGIYEWLQTGGLLVWPIILVGIIALGLVIERFYTLGRLRGNS CCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRNMQTILSMIRARKWHECQEFCARASNFPTCRIIGHTLGYMGATREIIENAYQEAMLKE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVLERFLPTLSVLAAVAPLLGLLGTVTGMINTFQTITLYGTGDPRMMSGGISEALITTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHCCCHHHHHHHHH LGLAVAVPIMILHHILERRVDALMGDMEEKGTSFTVALMQQGQIRQGESYGAAA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEHHCCCCCCCCCCCCCC >Mature Secondary Structure MKYKILTLVTLLITASVPAHAQWSGAVAETRKLAAETRSEAAKTRDLITSEKKAVVNEKA CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLEKVIAAKHKQHEELKARYEALLQQEARLKEELAQQAHELKTIDGTIRTSAKQARDYFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLTTPEFPHREPVLSVILTPETFPGLEGIKNLLRLYMEEMSASGRVQLREGSFVNADGR HHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCC TETARLLRIGTFTAAFKKQDGTAGFLRPLHEGSLLGAVPGNPGWTLGRGMRAYFEGESDT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCHHCCCHHHCCCCCCC FPVDISNGAALARLEQDQKGIYEWLQTGGLLVWPIILVGIIALGLVIERFYTLGRLRGNS CCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRNMQTILSMIRARKWHECQEFCARASNFPTCRIIGHTLGYMGATREIIENAYQEAMLKE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVLERFLPTLSVLAAVAPLLGLLGTVTGMINTFQTITLYGTGDPRMMSGGISEALITTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHCCCHHHHHHHHH LGLAVAVPIMILHHILERRVDALMGDMEEKGTSFTVALMQQGQIRQGESYGAAA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]