| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is otsB [C]
Identifier: 78357104
GI number: 78357104
Start: 2104692
End: 2105498
Strand: Reverse
Name: otsB [C]
Synonym: Dde_2061
Alternate gene names: 78357104
Gene position: 2105498-2104692 (Counterclockwise)
Preceding gene: 78357105
Following gene: 78357103
Centisome position: 56.44
GC content: 59.48
Gene sequence:
>807_bases ATGCTGACATGGGAGCAGGCAGATAACCATCAGGCACTGTGGGCAAAGGTGGCCGCTGCCCCGGAGGTGCTGCTTATGCT TGACTATGATGGTACGCTGGCACCTTTTACCGCTGAACGGGACAGAGCATGGCCGTATGACGGCGTGAGGGAATCCCTCC GCCGGTTGGCTGCGTGCAACGGCATTGTGCCGGTTATTGTTTCAGGCAGACAGTGTCACGAAATTCCGCCTTTGCTGGAC CTTGGTATTCCGCTGGAAGTATGGGGCGGGCACGGGGCCGAAAGGCAGCTTCCCGGTGCTCAGAGTGAAAAGGCTGCGCT GTCCGGTGATTTGCGCCAGCGGCTGGATGATGCGTTTGCTCTTGCCTGCGGGCAGGTCTGTCTGCGCCGGATTGAACGCA AAACCTTCAGCGTGGCTGTGCACGTGCGGGGCATGGACTCCGGCACGGCATCCTTAGTGCTGGATGCGCTGCGGGGGCAG TGGACACTGCTTGCAAGTGACGCGGCGTTGGAGATTCTGCCATTCGAATGCGGCCTGGAACTGCGTGTAGCCGGTTTCAG CAAGGCCCGTGCAGTGACGCAGCTTTTGAAAGATCATCCCCTGGCTGCGGCATTTTATCTGGGAGATGACAAAACAGACG AAGATGCTTTCCGCGTGCTTGTTCCTGTTCTGGCATCCGGTGACCGTACAGGCGCTGCTGTTCTGGTTACTGACCGTCCT GCTGCGGTTTCTGCTGCACAGTGGCATCTTGTGCCGCCGGTGCAGCTGCTGGCCTTTTTATCCCGCCTTGCAGCCTGCCG CTGCTGA
Upstream 100 bases:
>100_bases CTGACATATATAGTCACCTTCCGCATGGTGAACGCCTACCGGCAACGCAGAATGATAAAGCTGCTTAAACAATACGAAGC GGGCAGGAAGGCGAGAGAAC
Downstream 100 bases:
>100_bases TTGCCTTTGTTTTTTTCCGCGTAATTCTGCTCCGGGTTGTCCGGCAGTGCCGTTGCCGTTATAGTTTCCTCCACTGCAAT TATCAGAAGGAGGCTTCCAT
Product: trehalose-phosphatase
Products: Phosphate; Trehalose [C]
Alternate protein names: HAD Family Hydrolase; Trehalose-Phosphatase/Glycoside Hydrolase; Trehalose 6-Phosphate Phosphatase; Beta-Phosphoglucomutase Family Hydrolase; Trehalose-6-Phosphate Synthase; Trehalose-Phosphatase/ Glycoside Hydrolase; Trehalose-6-Phosphatase; HAD-Superfamily Hydrolase Subfamily IIB; Trehalose Phosphatase; Trehalose-6-Phosphate Phosphatase; Trehalose-6-Phosphate Phophatase; Alpha Alpha-Trehalose-Phosphate Synthase
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACNGIVPVIVSGRQCHEIPPLLD LGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFALACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQ WTLLASDAALEILPFECGLELRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP AAVSAAQWHLVPPVQLLAFLSRLAACRC
Sequences:
>Translated_268_residues MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACNGIVPVIVSGRQCHEIPPLLD LGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFALACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQ WTLLASDAALEILPFECGLELRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP AAVSAAQWHLVPPVQLLAFLSRLAACRC >Mature_268_residues MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACNGIVPVIVSGRQCHEIPPLLD LGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFALACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQ WTLLASDAALEILPFECGLELRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP AAVSAAQWHLVPPVQLLAFLSRLAACRC
Specific function: Unknown
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.12 [C]
Molecular weight: Translated: 28980; Mature: 28980
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACN CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GIVPVIVSGRQCHEIPPLLDLGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFA CCEEEEECCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQWTLLASDAALEILPFECGLE HHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCE LRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC AAVSAAQWHLVPPVQLLAFLSRLAACRC CCCCCCCEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACN CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GIVPVIVSGRQCHEIPPLLDLGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFA CCEEEEECCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQWTLLASDAALEILPFECGLE HHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCE LRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC AAVSAAQWHLVPPVQLLAFLSRLAACRC CCCCCCCEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; alpha,alpha'-Trehalose 6-phosphate [C]
Specific reaction: H2O + alpha,alpha'-Trehalose 6-phosphate --> Phosphate + Trehalose [C]
General reaction: Phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA