Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is otsB [C]

Identifier: 78357104

GI number: 78357104

Start: 2104692

End: 2105498

Strand: Reverse

Name: otsB [C]

Synonym: Dde_2061

Alternate gene names: 78357104

Gene position: 2105498-2104692 (Counterclockwise)

Preceding gene: 78357105

Following gene: 78357103

Centisome position: 56.44

GC content: 59.48

Gene sequence:

>807_bases
ATGCTGACATGGGAGCAGGCAGATAACCATCAGGCACTGTGGGCAAAGGTGGCCGCTGCCCCGGAGGTGCTGCTTATGCT
TGACTATGATGGTACGCTGGCACCTTTTACCGCTGAACGGGACAGAGCATGGCCGTATGACGGCGTGAGGGAATCCCTCC
GCCGGTTGGCTGCGTGCAACGGCATTGTGCCGGTTATTGTTTCAGGCAGACAGTGTCACGAAATTCCGCCTTTGCTGGAC
CTTGGTATTCCGCTGGAAGTATGGGGCGGGCACGGGGCCGAAAGGCAGCTTCCCGGTGCTCAGAGTGAAAAGGCTGCGCT
GTCCGGTGATTTGCGCCAGCGGCTGGATGATGCGTTTGCTCTTGCCTGCGGGCAGGTCTGTCTGCGCCGGATTGAACGCA
AAACCTTCAGCGTGGCTGTGCACGTGCGGGGCATGGACTCCGGCACGGCATCCTTAGTGCTGGATGCGCTGCGGGGGCAG
TGGACACTGCTTGCAAGTGACGCGGCGTTGGAGATTCTGCCATTCGAATGCGGCCTGGAACTGCGTGTAGCCGGTTTCAG
CAAGGCCCGTGCAGTGACGCAGCTTTTGAAAGATCATCCCCTGGCTGCGGCATTTTATCTGGGAGATGACAAAACAGACG
AAGATGCTTTCCGCGTGCTTGTTCCTGTTCTGGCATCCGGTGACCGTACAGGCGCTGCTGTTCTGGTTACTGACCGTCCT
GCTGCGGTTTCTGCTGCACAGTGGCATCTTGTGCCGCCGGTGCAGCTGCTGGCCTTTTTATCCCGCCTTGCAGCCTGCCG
CTGCTGA

Upstream 100 bases:

>100_bases
CTGACATATATAGTCACCTTCCGCATGGTGAACGCCTACCGGCAACGCAGAATGATAAAGCTGCTTAAACAATACGAAGC
GGGCAGGAAGGCGAGAGAAC

Downstream 100 bases:

>100_bases
TTGCCTTTGTTTTTTTCCGCGTAATTCTGCTCCGGGTTGTCCGGCAGTGCCGTTGCCGTTATAGTTTCCTCCACTGCAAT
TATCAGAAGGAGGCTTCCAT

Product: trehalose-phosphatase

Products: Phosphate; Trehalose [C]

Alternate protein names: HAD Family Hydrolase; Trehalose-Phosphatase/Glycoside Hydrolase; Trehalose 6-Phosphate Phosphatase; Beta-Phosphoglucomutase Family Hydrolase; Trehalose-6-Phosphate Synthase; Trehalose-Phosphatase/ Glycoside Hydrolase; Trehalose-6-Phosphatase; HAD-Superfamily Hydrolase Subfamily IIB; Trehalose Phosphatase; Trehalose-6-Phosphate Phosphatase; Trehalose-6-Phosphate Phophatase; Alpha Alpha-Trehalose-Phosphate Synthase

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACNGIVPVIVSGRQCHEIPPLLD
LGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFALACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQ
WTLLASDAALEILPFECGLELRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP
AAVSAAQWHLVPPVQLLAFLSRLAACRC

Sequences:

>Translated_268_residues
MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACNGIVPVIVSGRQCHEIPPLLD
LGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFALACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQ
WTLLASDAALEILPFECGLELRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP
AAVSAAQWHLVPPVQLLAFLSRLAACRC
>Mature_268_residues
MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACNGIVPVIVSGRQCHEIPPLLD
LGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFALACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQ
WTLLASDAALEILPFECGLELRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP
AAVSAAQWHLVPPVQLLAFLSRLAACRC

Specific function: Unknown

COG id: COG1877

COG function: function code G; Trehalose-6-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.12 [C]

Molecular weight: Translated: 28980; Mature: 28980

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACN
CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GIVPVIVSGRQCHEIPPLLDLGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFA
CCEEEEECCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQWTLLASDAALEILPFECGLE
HHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCE
LRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP
EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC
AAVSAAQWHLVPPVQLLAFLSRLAACRC
CCCCCCCEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTWEQADNHQALWAKVAAAPEVLLMLDYDGTLAPFTAERDRAWPYDGVRESLRRLAACN
CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GIVPVIVSGRQCHEIPPLLDLGIPLEVWGGHGAERQLPGAQSEKAALSGDLRQRLDDAFA
CCEEEEECCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LACGQVCLRRIERKTFSVAVHVRGMDSGTASLVLDALRGQWTLLASDAALEILPFECGLE
HHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCE
LRVAGFSKARAVTQLLKDHPLAAAFYLGDDKTDEDAFRVLVPVLASGDRTGAAVLVTDRP
EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC
AAVSAAQWHLVPPVQLLAFLSRLAACRC
CCCCCCCEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; alpha,alpha'-Trehalose 6-phosphate [C]

Specific reaction: H2O + alpha,alpha'-Trehalose 6-phosphate --> Phosphate + Trehalose [C]

General reaction: Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA