| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357081
Identifier: 78357081
GI number: 78357081
Start: 2079106
End: 2080113
Strand: Reverse
Name: 78357081
Synonym: Dde_2038
Alternate gene names: NA
Gene position: 2080113-2079106 (Counterclockwise)
Preceding gene: 78357082
Following gene: 78357080
Centisome position: 55.76
GC content: 56.05
Gene sequence:
>1008_bases ATGCGCAGACAGATTGCGGCCGTGGTGGCTGCATGTGTGATTATGGCAGCAGCCGGCTGCAAAGACGATGTGGAACAGCA GGGCGTGGTGGCCACGGTTAACGGCAGCCCTGTGTATCTTCAGGAGCTGGAAGCCCGCTATGATCTGGATCATCTGAGCT GGAGCGGCGCCATGGTCCCTTCCGTCGATCAGTTGCGCAAGGACTACGGCAGTGCGCTTGCCGGACTTATTGTACAGCGC CTTGTGGAGCAGGATCTGGAAAAATCCGGACTGGACGTGACAGATGAAGAGGTGCTGAAAGCCGAGGAAGAGGTGCGGGC CGACTACCCCCCCGGTGAGTTTGAAAAAGTGCTTGTCGAAGATTACATAGACCTTGCCACATGGCGGTATATGCTGCGGC AGCATCTGCAGCGCGAAAAGTTCCGTTCCGAAATTCTGCGGCCTGCGATTTCTTTGAGCTTTGAAGAAGCTGAAGATTAT TACAAAGCGCATCTGAGCGATTTTTACCTGCCGGAAAGAATAAATTTTCTGTACATTTCCGGGCCGGACAGAGGCACTGT GGAAAAGGCCCGCGATTTGTTGACAGAAGGTAAGGACCGGGCAGAGGTGCTCGGCAGCTTCAGCCAGCTTTCGGTCCGGG AGCTGAAAATGCGAGAAGACCGGATTCACGGCACATGGAAGCAGCTGCTGGCCAAGCTTGAAGACGGGCAGGCTTCACCT GTGCTTAACGGCGAAGCTGGCTATGAGGCTTTTATCATGCTGGGGCTGCTGCCGGAAAAAGTTCTCGGTCCGTCTCAGGC CTATCCCATCATCGAGCGTCTGCTTATCGAGGAGAAAATGCAGCAGGTCTATGCTCAATGGCTGGAAAAACGTCTGGAGA GCGCGGAGGTGAAAGTTTCTGACCTGTTGCTTCGCCCCGGCGAAGATGAGACTCCTGTTCCGGAACTGGCGCCGGAGCCG GAGGAGCCTGCCGCTCCGGAAGCGTTCAATGCCACGGGGGCAAGCTGA
Upstream 100 bases:
>100_bases CCAGCTGCCGGAAGGTTCCGCTTTTGAAGACCGGCTTTCTGCCCTGCAGTCGGAACTTGAATTGCTGCGGGCACAGTAGC TAAAACCAATCGGGATGGAT
Downstream 100 bases:
>100_bases CGCGGCCCTTGACGGGCAGGTGTTTTCCGGCGCTCGTTGCAATGCTGATTAAAAGATATTACATCCCACAGATTATATGC ATCTTACCAACTGGCCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRRQIAAVVAACVIMAAAGCKDDVEQQGVVATVNGSPVYLQELEARYDLDHLSWSGAMVPSVDQLRKDYGSALAGLIVQR LVEQDLEKSGLDVTDEEVLKAEEEVRADYPPGEFEKVLVEDYIDLATWRYMLRQHLQREKFRSEILRPAISLSFEEAEDY YKAHLSDFYLPERINFLYISGPDRGTVEKARDLLTEGKDRAEVLGSFSQLSVRELKMREDRIHGTWKQLLAKLEDGQASP VLNGEAGYEAFIMLGLLPEKVLGPSQAYPIIERLLIEEKMQQVYAQWLEKRLESAEVKVSDLLLRPGEDETPVPELAPEP EEPAAPEAFNATGAS
Sequences:
>Translated_335_residues MRRQIAAVVAACVIMAAAGCKDDVEQQGVVATVNGSPVYLQELEARYDLDHLSWSGAMVPSVDQLRKDYGSALAGLIVQR LVEQDLEKSGLDVTDEEVLKAEEEVRADYPPGEFEKVLVEDYIDLATWRYMLRQHLQREKFRSEILRPAISLSFEEAEDY YKAHLSDFYLPERINFLYISGPDRGTVEKARDLLTEGKDRAEVLGSFSQLSVRELKMREDRIHGTWKQLLAKLEDGQASP VLNGEAGYEAFIMLGLLPEKVLGPSQAYPIIERLLIEEKMQQVYAQWLEKRLESAEVKVSDLLLRPGEDETPVPELAPEP EEPAAPEAFNATGAS >Mature_335_residues MRRQIAAVVAACVIMAAAGCKDDVEQQGVVATVNGSPVYLQELEARYDLDHLSWSGAMVPSVDQLRKDYGSALAGLIVQR LVEQDLEKSGLDVTDEEVLKAEEEVRADYPPGEFEKVLVEDYIDLATWRYMLRQHLQREKFRSEILRPAISLSFEEAEDY YKAHLSDFYLPERINFLYISGPDRGTVEKARDLLTEGKDRAEVLGSFSQLSVRELKMREDRIHGTWKQLLAKLEDGQASP VLNGEAGYEAFIMLGLLPEKVLGPSQAYPIIERLLIEEKMQQVYAQWLEKRLESAEVKVSDLLLRPGEDETPVPELAPEP EEPAAPEAFNATGAS
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37669; Mature: 37669
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQIAAVVAACVIMAAAGCKDDVEQQGVVATVNGSPVYLQELEARYDLDHLSWSGAMVP CCHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCHHHHHHHHHHCHHHCCCCCCCCC SVDQLRKDYGSALAGLIVQRLVEQDLEKSGLDVTDEEVLKAEEEVRADYPPGEFEKVLVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH DYIDLATWRYMLRQHLQREKFRSEILRPAISLSFEEAEDYYKAHLSDFYLPERINFLYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEE GPDRGTVEKARDLLTEGKDRAEVLGSFSQLSVRELKMREDRIHGTWKQLLAKLEDGQASP CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VLNGEAGYEAFIMLGLLPEKVLGPSQAYPIIERLLIEEKMQQVYAQWLEKRLESAEVKVS CCCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLLRPGEDETPVPELAPEPEEPAAPEAFNATGAS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRQIAAVVAACVIMAAAGCKDDVEQQGVVATVNGSPVYLQELEARYDLDHLSWSGAMVP CCHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCHHHHHHHHHHCHHHCCCCCCCCC SVDQLRKDYGSALAGLIVQRLVEQDLEKSGLDVTDEEVLKAEEEVRADYPPGEFEKVLVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH DYIDLATWRYMLRQHLQREKFRSEILRPAISLSFEEAEDYYKAHLSDFYLPERINFLYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEE GPDRGTVEKARDLLTEGKDRAEVLGSFSQLSVRELKMREDRIHGTWKQLLAKLEDGQASP CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VLNGEAGYEAFIMLGLLPEKVLGPSQAYPIIERLLIEEKMQQVYAQWLEKRLESAEVKVS CCCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLLRPGEDETPVPELAPEPEEPAAPEAFNATGAS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA