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The map label for this gene is recO

Identifier: 78357078

GI number: 78357078

Start: 2076272

End: 2077018

Strand: Reverse

Name: recO

Synonym: Dde_2035

Alternate gene names: 78357078

Gene position: 2077018-2076272 (Counterclockwise)

Preceding gene: 78357079

Following gene: 78357077

Centisome position: 55.68

GC content: 57.16

Gene sequence:

>747_bases
ATGGATTTTACGGAAAAAGCGCTGGTGCTCCGCACCGGCAGATTTCGGGAAGCGGACTTATGGGTCCGCTTTTTGTCTCC
CTCAAGAGGCGTGATTACTGCGTTTGCTTTTGGCGGGTGTCGCAGCCGCAGACGTTTCTGCGGGTGTCTTGATGCGCTCA
ACCATGTGCTGGTAAAGGTTTCCAGTGACAAGCGGCGTACATATCTGTGTCTGGACGAAGGGACTCTGCTCAACGGCCCT
GTCCGTTTGCGCTCCGACTGGGGCCGTACCGGTGTGGCTGCCAACTGCATCAAGTTTGTGGAAGCCATGGGAGTAGGGCC
TGAGGGTGCTGCCGATGCGTATGATCTGACGTGCGGCATGCTGGAATTGCTGGAAACGGCCGATGTGGTGCCGGAAATTT
TTCCGGTGCTTTTTCGGGGGCGGCTGGCTTTTGATCAGGGCTATCGCATTGATCCTGTCCGTTGTGCGCGCTGCGGCATG
CGGCTGAAAGATGTTGCCGGTGTCCGCTTTTTGCCCCGTGAAGGTGTGTTTGAGTGTTCGGCACACGGGGGCGCGTCCGG
CGGCGGTTTTATGATGTCCGCTGAAACCCTTGACGCCGTTCGATTTGTGCAGGAGAATCCCCCGCTCATGTGGACTGATA
TTCCGCTGTCACCCGAAGGGTGGAAGCAGTGGGGCCGCGCTGTTGATGCGTTTATTCAATACCATGTAGGCCTTGTCTGG
GATAAGGGCCGGTTCCGCAGAATATGA

Upstream 100 bases:

>100_bases
GAGTGGACGTGAAGCTGAACGGGCGTGCCGTTCCGGTGGAAGCCGCACCCGGAGATGTGGTTACGTTGCAGTTTCCATAG
CCGTTACCGGCAAGAGGGAT

Downstream 100 bases:

>100_bases
CGGGACGGACCGTTCCGGCCGGATGGTGTACTATTTATAGTGATTTAGGGGAAAATATGAACTTTCAAGACGTTATCCTT
ACGCTGCAGAATTTCTGGGC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDFTEKALVLRTGRFREADLWVRFLSPSRGVITAFAFGGCRSRRRFCGCLDALNHVLVKVSSDKRRTYLCLDEGTLLNGP
VRLRSDWGRTGVAANCIKFVEAMGVGPEGAADAYDLTCGMLELLETADVVPEIFPVLFRGRLAFDQGYRIDPVRCARCGM
RLKDVAGVRFLPREGVFECSAHGGASGGGFMMSAETLDAVRFVQENPPLMWTDIPLSPEGWKQWGRAVDAFIQYHVGLVW
DKGRFRRI

Sequences:

>Translated_248_residues
MDFTEKALVLRTGRFREADLWVRFLSPSRGVITAFAFGGCRSRRRFCGCLDALNHVLVKVSSDKRRTYLCLDEGTLLNGP
VRLRSDWGRTGVAANCIKFVEAMGVGPEGAADAYDLTCGMLELLETADVVPEIFPVLFRGRLAFDQGYRIDPVRCARCGM
RLKDVAGVRFLPREGVFECSAHGGASGGGFMMSAETLDAVRFVQENPPLMWTDIPLSPEGWKQWGRAVDAFIQYHVGLVW
DKGRFRRI
>Mature_248_residues
MDFTEKALVLRTGRFREADLWVRFLSPSRGVITAFAFGGCRSRRRFCGCLDALNHVLVKVSSDKRRTYLCLDEGTLLNGP
VRLRSDWGRTGVAANCIKFVEAMGVGPEGAADAYDLTCGMLELLETADVVPEIFPVLFRGRLAFDQGYRIDPVRCARCGM
RLKDVAGVRFLPREGVFECSAHGGASGGGFMMSAETLDAVRFVQENPPLMWTDIPLSPEGWKQWGRAVDAFIQYHVGLVW
DKGRFRRI

Specific function: Involved in DNA repair and recF pathway recombination

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_DESDG (Q30ZR4)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_388527.1
- ProteinModelPortal:   Q30ZR4
- SMR:   Q30ZR4
- STRING:   Q30ZR4
- GeneID:   3757043
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_2035
- NMPDR:   fig|207559.3.peg.2318
- eggNOG:   NOG83047
- HOGENOM:   HBG458224
- OMA:   AFINCIR
- ProtClustDB:   CLSK705478
- BioCyc:   DDES207559:DDE_2035-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27676; Mature: 27676

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTEKALVLRTGRFREADLWVRFLSPSRGVITAFAFGGCRSRRRFCGCLDALNHVLVKV
CCCCCCCCEEECCCCCCHHEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEE
SSDKRRTYLCLDEGTLLNGPVRLRSDWGRTGVAANCIKFVEAMGVGPEGAADAYDLTCGM
CCCCCEEEEEECCCEEECCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LELLETADVVPEIFPVLFRGRLAFDQGYRIDPVRCARCGMRLKDVAGVRFLPREGVFECS
HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHCCCHHHHCCCEECCCCCCEEEC
AHGGASGGGFMMSAETLDAVRFVQENPPLMWTDIPLSPEGWKQWGRAVDAFIQYHVGLVW
CCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEE
DKGRFRRI
CCCCCCCC
>Mature Secondary Structure
MDFTEKALVLRTGRFREADLWVRFLSPSRGVITAFAFGGCRSRRRFCGCLDALNHVLVKV
CCCCCCCCEEECCCCCCHHEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEE
SSDKRRTYLCLDEGTLLNGPVRLRSDWGRTGVAANCIKFVEAMGVGPEGAADAYDLTCGM
CCCCCEEEEEECCCEEECCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LELLETADVVPEIFPVLFRGRLAFDQGYRIDPVRCARCGMRLKDVAGVRFLPREGVFECS
HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHCCCHHHHCCCEECCCCCCEEEC
AHGGASGGGFMMSAETLDAVRFVQENPPLMWTDIPLSPEGWKQWGRAVDAFIQYHVGLVW
CCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEE
DKGRFRRI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA