| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is adk [H]
Identifier: 78357071
GI number: 78357071
Start: 2067413
End: 2068102
Strand: Direct
Name: adk [H]
Synonym: Dde_2028
Alternate gene names: 78357071
Gene position: 2067413-2068102 (Clockwise)
Preceding gene: 78357070
Following gene: 78357075
Centisome position: 55.42
GC content: 54.78
Gene sequence:
>690_bases ATGACAAGGAGGAATGACGTGAATATACTCATCTTCGGCCCCAACGGTAGCGGTAAGGGAACACAGGGTTCTCTGGTTAA GCAGAAATACAATCTGGCCCACATCGAATCCGGTGCCATCTTCCGCGAACACATCGGCGGTGGTACGGAGCTTGGTAAAA AAGCCAAGGAATACATCGATCGCGGCGATCTGGTCCCCGACGAAATCACCATTCCCATGGTTCTTGAAACGCTCAAGAGC AAGGGTGCCAACGGCTGGCTGCTGGACGGCTTTCCCCGTAACATGGTGCAGGCTGAAAAGCTGTGGGACGCGCTGCAGGC CGAAAACATGAAACTTGACTACGTCATCGAAATCCTGCTGCCCCGCGAAGTGGCCAAAAACCGCATCATGGGCCGCCGTC TGTGTGTCAACGACAACAACCACCCCAACAATATTTTCATCGACGCCATCAAGCCCGAAGGCGACAAGTGCCGCGTATGT GGCGGCGCGCTGAGCAGCCGTGCTGATGATCAGGACGAAGGTGCCATTAACAAGCGTCATGACATCTACTACAACACCGA AGACGGCACTCTGGCCGCTGCCTACTTCTACAAAGACCTCGCAGCCAAAGGCGCCACCAAATACATTGAACTGAACGGCG AAGGCGACATCAACTCCATCAAGGAAACCTTGCTGGCCCAGCTCGCCTAG
Upstream 100 bases:
>100_bases CAGGATACGCCATGGCGGCATATGCTTCTGCCTAACCGCCTGATTCTTTTTTATCCGATTGACAGGGTGCGATTCTTCGC AGTATGACTTCGTGAAATAA
Downstream 100 bases:
>100_bases TCTGATCTCTTCCGCCACAAAAAGGCCCCCGCTGAAAGCGGGGGCCTTTTCTTATGCATAACGCACCGACAGCAAGCAGG CGGTACATGTTCTGCGCGCG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTRRNDVNILIFGPNGSGKGTQGSLVKQKYNLAHIESGAIFREHIGGGTELGKKAKEYIDRGDLVPDEITIPMVLETLKS KGANGWLLDGFPRNMVQAEKLWDALQAENMKLDYVIEILLPREVAKNRIMGRRLCVNDNNHPNNIFIDAIKPEGDKCRVC GGALSSRADDQDEGAINKRHDIYYNTEDGTLAAAYFYKDLAAKGATKYIELNGEGDINSIKETLLAQLA
Sequences:
>Translated_229_residues MTRRNDVNILIFGPNGSGKGTQGSLVKQKYNLAHIESGAIFREHIGGGTELGKKAKEYIDRGDLVPDEITIPMVLETLKS KGANGWLLDGFPRNMVQAEKLWDALQAENMKLDYVIEILLPREVAKNRIMGRRLCVNDNNHPNNIFIDAIKPEGDKCRVC GGALSSRADDQDEGAINKRHDIYYNTEDGTLAAAYFYKDLAAKGATKYIELNGEGDINSIKETLLAQLA >Mature_228_residues TRRNDVNILIFGPNGSGKGTQGSLVKQKYNLAHIESGAIFREHIGGGTELGKKAKEYIDRGDLVPDEITIPMVLETLKSK GANGWLLDGFPRNMVQAEKLWDALQAENMKLDYVIEILLPREVAKNRIMGRRLCVNDNNHPNNIFIDAIKPEGDKCRVCG GALSSRADDQDEGAINKRHDIYYNTEDGTLAAAYFYKDLAAKGATKYIELNGEGDINSIKETLLAQLA
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=180, Percent_Identity=34.4444444444444, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI4502013, Length=180, Percent_Identity=34.4444444444444, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI19923437, Length=196, Percent_Identity=36.2244897959184, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI310110345, Length=173, Percent_Identity=35.8381502890173, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI53832003, Length=173, Percent_Identity=35.8381502890173, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI8051579, Length=173, Percent_Identity=35.8381502890173, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI53832001, Length=173, Percent_Identity=35.8381502890173, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI4502011, Length=223, Percent_Identity=27.3542600896861, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI28144899, Length=95, Percent_Identity=35.7894736842105, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI28144897, Length=95, Percent_Identity=35.7894736842105, Blast_Score=71, Evalue=7e-13, Organism=Escherichia coli, GI1786680, Length=219, Percent_Identity=35.1598173515982, Blast_Score=123, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17552384, Length=193, Percent_Identity=33.160621761658, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17537943, Length=186, Percent_Identity=30.6451612903226, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17567503, Length=129, Percent_Identity=32.5581395348837, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17533833, Length=140, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17550688, Length=134, Percent_Identity=31.3432835820896, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320432, Length=201, Percent_Identity=35.3233830845771, Blast_Score=109, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321018, Length=181, Percent_Identity=34.8066298342541, Blast_Score=89, Evalue=7e-19, Organism=Drosophila melanogaster, GI22026816, Length=179, Percent_Identity=38.5474860335196, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737899, Length=174, Percent_Identity=37.3563218390805, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24645822, Length=174, Percent_Identity=37.3563218390805, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI221459597, Length=125, Percent_Identity=30.4, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356893, Length=125, Percent_Identity=30.4, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 25323; Mature: 25192
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRNDVNILIFGPNGSGKGTQGSLVKQKYNLAHIESGAIFREHIGGGTELGKKAKEYID CCCCCCCEEEEECCCCCCCCCCCCHHHHHCCEEEECCCCCHHHHCCCCHHHHHHHHHHHH RGDLVPDEITIPMVLETLKSKGANGWLLDGFPRNMVQAEKLWDALQAENMKLDYVIEILL CCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEC PREVAKNRIMGRRLCVNDNNHPNNIFIDAIKPEGDKCRVCGGALSSRADDQDEGAINKRH CHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCC DIYYNTEDGTLAAAYFYKDLAAKGATKYIELNGEGDINSIKETLLAQLA CEEEECCCCCEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure TRRNDVNILIFGPNGSGKGTQGSLVKQKYNLAHIESGAIFREHIGGGTELGKKAKEYID CCCCCCEEEEECCCCCCCCCCCCHHHHHCCEEEECCCCCHHHHCCCCHHHHHHHHHHHH RGDLVPDEITIPMVLETLKSKGANGWLLDGFPRNMVQAEKLWDALQAENMKLDYVIEILL CCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEC PREVAKNRIMGRRLCVNDNNHPNNIFIDAIKPEGDKCRVCGGALSSRADDQDEGAINKRH CHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCC DIYYNTEDGTLAAAYFYKDLAAKGATKYIELNGEGDINSIKETLLAQLA CEEEECCCCCEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA