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The map label for this gene is yrbE [C]

Identifier: 78357028

GI number: 78357028

Start: 2029359

End: 2030480

Strand: Reverse

Name: yrbE [C]

Synonym: Dde_1985

Alternate gene names: 78357028

Gene position: 2030480-2029359 (Counterclockwise)

Preceding gene: 78357030

Following gene: 78357027

Centisome position: 54.43

GC content: 54.55

Gene sequence:

>1122_bases
ATGGCCAGAGTTGATCTGCAGCATGACGGCGCGGGACGCTGTGTGATTGTTTTTCAGGGCAGATGGACGCTGCACGACAC
TGTCCCTTCTGTCGGAAAGCTCGCGCTCCGGCTGGAAAGTGATTGCCGCGGAGGGGCTGTTTCGTTTTCATGTGCCGGAC
TGACGGCATGGGACAGCCGCTTTCTCACTTTTTGCCGTTCTGTGCTGGAAACGCTTGAAGGCCGCGGTATTGCGTATGAC
ACATCCGGGTTGCCCGACGGTGTGCTGCGGTTGCTCTCACTGGCGGCGCAGGTTCCTGAAAGAGAAGGCGCAGCCGTCAG
CAGAAAATCGCCGTTATCGGCCAGAATGGGCGAAGCGTTGCATGCCGCGTTTGCCGGTACGATTTCGGTCATGGAGTTCA
TCGGTGATGTAACTCTTTCCGTTTTACGGATGTGCATCGGAAGAGCAGTGTTCCGCTGGTCTGATACTTTTGCATTACTC
CGGTTTTGCGGTGCGCAGTCGCTGCCGATTGTCTCGCTTATCAGCATGCTGGCCGGGTTGATTTTTGCCTTTGTGGGCGC
GGTGCAGCTTAAGATGTTCGGTGCGGAGATTTATGTGGCGAGCCTTGTGGGGATTGCCATGCTGCGTGTCATGGGTGCAG
TGATGACCGCTATCATTGTGTCCGGACGCGTCGGGGCTGCATTTGCGGCCGAGCTGGGAACCATGCAGGTCAACGAGGAG
ATCGACGCCTTTTCCACATTCGGAATTTCTCCGCTGGATTTTCTTGTTCTGCCGCGGATGCTGGCTCTGGTACTCATGAT
GCCGTTGCTGTGCGTGTATGCCAATCTTATGGGTATCGTGGGGGGGGCGGCCGTGGGCTGGCTGATGCTGGACATCAATC
TGCACCAGTATTTCAATATGACGTGGCAGACGGTTTCTTTAACCCACTTCGGGGTAGGTATTGCGCATAGTGTGGTTTTT
GGTTTTGTTGTTGCCGTGTGCAGTTGCTATATGGGGATACACTGTGGAAGGAGTGCTTCTGCTGTGGGCAAGGCGACAAC
GTCTGCTGTTGTGTCAAGCATAGTCAGTATCGTTGTCGCTACTGCTGTTATAACGTTTCTGTGTAATATTCTCGGGATAT
AA

Upstream 100 bases:

>100_bases
GCCCCTCTTTTTTTGTTCACATATAGCCATGTCTTTTCTTTTGGCGTAGTTGGTATTGAGTAGTTTTGCTGAAGAACCAT
TGCGTGGAGAATGTTTTCTT

Downstream 100 bases:

>100_bases
TCTATGAACACAGATTCAGAACACCTTGGTGTACGCGGGCTTAAAGTGGCCTATGGTGATTTTGTTCTGATGCGGGATGT
GTCCTTCAGCATCAGGCGGG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MARVDLQHDGAGRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLETLEGRGIAYD
TSGLPDGVLRLLSLAAQVPEREGAAVSRKSPLSARMGEALHAAFAGTISVMEFIGDVTLSVLRMCIGRAVFRWSDTFALL
RFCGAQSLPIVSLISMLAGLIFAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEE
IDAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNMTWQTVSLTHFGVGIAHSVVF
GFVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVATAVITFLCNILGI

Sequences:

>Translated_373_residues
MARVDLQHDGAGRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLETLEGRGIAYD
TSGLPDGVLRLLSLAAQVPEREGAAVSRKSPLSARMGEALHAAFAGTISVMEFIGDVTLSVLRMCIGRAVFRWSDTFALL
RFCGAQSLPIVSLISMLAGLIFAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEE
IDAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNMTWQTVSLTHFGVGIAHSVVF
GFVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVATAVITFLCNILGI
>Mature_372_residues
ARVDLQHDGAGRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLETLEGRGIAYDT
SGLPDGVLRLLSLAAQVPEREGAAVSRKSPLSARMGEALHAAFAGTISVMEFIGDVTLSVLRMCIGRAVFRWSDTFALLR
FCGAQSLPIVSLISMLAGLIFAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEEI
DAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNMTWQTVSLTHFGVGIAHSVVFG
FVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVATAVITFLCNILGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=243, Percent_Identity=27.1604938271605, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 39494; Mature: 39363

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVDLQHDGAGRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSR
CCEECCCCCCCCCEEEEEECCEEEHHCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
FLTFCRSVLETLEGRGIAYDTSGLPDGVLRLLSLAAQVPEREGAAVSRKSPLSARMGEAL
HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
HAAFAGTISVMEFIGDVTLSVLRMCIGRAVFRWSDTFALLRFCGAQSLPIVSLISMLAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IFAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEECCHH
IDAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNM
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHCC
TWQTVSLTHFGVGIAHSVVFGFVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVA
HHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TAVITFLCNILGI
HHHHHHHHHHHCC
>Mature Secondary Structure 
ARVDLQHDGAGRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSR
CEECCCCCCCCCEEEEEECCEEEHHCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH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HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA