| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357002
Identifier: 78357002
GI number: 78357002
Start: 2007091
End: 2007717
Strand: Reverse
Name: 78357002
Synonym: Dde_1959
Alternate gene names: NA
Gene position: 2007717-2007091 (Counterclockwise)
Preceding gene: 78357006
Following gene: 78357001
Centisome position: 53.82
GC content: 53.75
Gene sequence:
>627_bases ATGCCAGAAATTGAACTGAACTGCCAGAACCTTCCCTGCCCCCAGCCTGTGCTGAAGTGCAAGGATTGTATTGATACCCG GTCTCCCGCACAGATGGCTGTCATTGTGGATAACGCTGCGGCAAAAGAGAATGTAACGCGTTTTCTGGGTACCCGCGGGT ATGCGGTGACGGCAACGGAAACTCCGCAGGGGGCATGGAAACTTCAAGCTGTACTTGAATCTTCTGTCGGGGCTCAGAGC GGTTGCGAACAGTGCGAAGTGCTTTCGTCTGAAGAACTGCGTGCTCTGGATGAAAAAACGGTTGTTCTGATTACCACTGA AGTGCTGGGGAGCGGAGATGATACACTCGGAACAAGGCTGATGAAAAACTTTCTGGCAACGCTGCCCGAGCTGGGCAGTA CCTTGTGGCGGGTTGTTTTGCTTAACGGCGGCGTAAAGCTCGCTTCGGACGGCCACGAAGCACTTCCTGAACTGCAGAAG CTTGAGTCTGCCGGGGTGGACATTCTGGTCTGCGGAACGTGCCTTGACTTTTTCGGTCTGCTGGAACGCAAAGCGGCCGG ACAGACGACCAACATGCTGGATGTTGTGACAAGTCTGCAATTGGCTACAAAAGTTATCCGTCCCTGA
Upstream 100 bases:
>100_bases GCGGCCGTTGCTTTTTGCGGTTAATGCCGTCAATATCAGGCTCTGCCGGACGTTGTGCGCCGGACTTATTTTTGTACCCG TCCAAAACAGGAGTCGCATA
Downstream 100 bases:
>100_bases GGGCTTCCGGTCGGTTCTGGGCGGGCATATAATTGTGCCTTAAAGTTTAACTTGAAGAATATATGACTAAAAAAAATGAT CTCGTAAATAAAGCGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: SirA Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; SirA-Like Protein; Transcriptional Regulator; Cytoplasmic Protein; Redox Protein; Selenium Metabolism Protein Yedf; SirA-Like
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPEIELNCQNLPCPQPVLKCKDCIDTRSPAQMAVIVDNAAAKENVTRFLGTRGYAVTATETPQGAWKLQAVLESSVGAQS GCEQCEVLSSEELRALDEKTVVLITTEVLGSGDDTLGTRLMKNFLATLPELGSTLWRVVLLNGGVKLASDGHEALPELQK LESAGVDILVCGTCLDFFGLLERKAAGQTTNMLDVVTSLQLATKVIRP
Sequences:
>Translated_208_residues MPEIELNCQNLPCPQPVLKCKDCIDTRSPAQMAVIVDNAAAKENVTRFLGTRGYAVTATETPQGAWKLQAVLESSVGAQS GCEQCEVLSSEELRALDEKTVVLITTEVLGSGDDTLGTRLMKNFLATLPELGSTLWRVVLLNGGVKLASDGHEALPELQK LESAGVDILVCGTCLDFFGLLERKAAGQTTNMLDVVTSLQLATKVIRP >Mature_207_residues PEIELNCQNLPCPQPVLKCKDCIDTRSPAQMAVIVDNAAAKENVTRFLGTRGYAVTATETPQGAWKLQAVLESSVGAQSG CEQCEVLSSEELRALDEKTVVLITTEVLGSGDDTLGTRLMKNFLATLPELGSTLWRVVLLNGGVKLASDGHEALPELQKL ESAGVDILVCGTCLDFFGLLERKAAGQTTNMLDVVTSLQLATKVIRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22259; Mature: 22128
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIELNCQNLPCPQPVLKCKDCIDTRSPAQMAVIVDNAAAKENVTRFLGTRGYAVTATE CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECC TPQGAWKLQAVLESSVGAQSGCEQCEVLSSEELRALDEKTVVLITTEVLGSGDDTLGTRL CCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCEEEEEEEHHHCCCCHHHHHHH MKNFLATLPELGSTLWRVVLLNGGVKLASDGHEALPELQKLESAGVDILVCGTCLDFFGL HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH LERKAAGQTTNMLDVVTSLQLATKVIRP HHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEIELNCQNLPCPQPVLKCKDCIDTRSPAQMAVIVDNAAAKENVTRFLGTRGYAVTATE CCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECC TPQGAWKLQAVLESSVGAQSGCEQCEVLSSEELRALDEKTVVLITTEVLGSGDDTLGTRL CCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCEEEEEEEHHHCCCCHHHHHHH MKNFLATLPELGSTLWRVVLLNGGVKLASDGHEALPELQKLESAGVDILVCGTCLDFFGL HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH LERKAAGQTTNMLDVVTSLQLATKVIRP HHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA