| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356974
Identifier: 78356974
GI number: 78356974
Start: 1982775
End: 1983941
Strand: Reverse
Name: 78356974
Synonym: Dde_1931
Alternate gene names: NA
Gene position: 1983941-1982775 (Counterclockwise)
Preceding gene: 78356975
Following gene: 78356973
Centisome position: 53.19
GC content: 54.24
Gene sequence:
>1167_bases ATGGCAACTTTTAACCTACGCCGCTTTTCGAAGCCGGAGATGCTCCGGCGAATCGACAGGAAGCATCTCATTGCCTTTCT GGAGCCTCATGCCGCCTATTTTTCAGCTCGCGGCGTAGAGTTGCCACCAGTCCAGCACGAAGATGGCCTGGACTACAACG CGCTCAGTCACATTTTGCTGACCCCGGACGGTTCAACCCCAGACGACCTTGCAGAGGCCTTGTTCTATGTGAATGAAGTT TCGACTCCTGAAGGATTCGACTCCATTCAGGATGAGATCGCTGGAACGGACATCGACGTGGAAATCGGGGAAAACGCCGC ACCGGCAGACTTGGCGATCCAGGTCTGGATGGCTGACCGGGAAATCATCGAGAAGGTACACGCCGAACAGTTCTTCATGA ACGTCAGGTCCTTCGAGTATTTCAAGACCAAGAAAAACCCGCTGCCGGATTTCGTGCTGCCATCGGAGGAAACCCTCGCG GCCCTCGAAGCCGATCTTGACGAATGGTTTTCCAAGAAGCGTCGGGGCAAGTATTCCAAGGTGTTCGTCTATCCGAAGGA AGGCCACACATGGTTCCTCGTGCGCCACGGCAAGCCCTATGCCCGTGAAGCGGTCATTGAGGCCGGTGAATCCACCAGCC AATACTTCCGCCCTGAAAAATTCGACGTGCTTGCCTACAACCCCGTCATCGGGGAAATCCGAATGAACGCCGAAACCAAG GGGGAGAAGGAGCTCTACCGCAAGAAATTCGGATTCCACCTGTTCGGAAACGAAGAGTTTTTCAACGAGCGCAGCCGATT TGACCTGGAACCTTTGCGGCAAATTGGTGAGGACGCGCTTCTATGTGACGACGTCGATGGCATTGAGTATGTCAGGCTCA AGGAAGTTCAGGTCTTTTGGGGCGGCGCTCATAAGGACGTCGAAATCCGCAGGTCTGAGGACATTTTTGCATCACTTCGT GATCGAGGCGCTTCACTCCCGGGTGGAGGGAAAATCATCAAAGCAAGCTTCCAGATCAAGTTCGAGGGGTCCAAGACTCC AAGGTCTGTGATTTTGAGTTCGGGCAACCGGGCGCAATTCAAGCGTGATGGTGATGCCGAGATTATTGAGAGGTGGCTTG GACTCAGAGGTTTCATCGTCGGAGCCGGGGGCGTTTCGGATGAGTGA
Upstream 100 bases:
>100_bases CCGGAGGATGACCTTCGAGTTTTAGGCAAGGTCGTTGGATGGAAACGGAGTTAACCGAGACAGACATGGACGAATAACGA CAAAACGACAGGAGTATTTG
Downstream 100 bases:
>100_bases TCCCGTCTGGGCATATCTGGAGACATTGCCTGGAAAGTCGGCGGCGCTGTTCGATTGGGATAAGGCGCTATCCGGCTGGG ATCGGTATCCGTTGTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MATFNLRRFSKPEMLRRIDRKHLIAFLEPHAAYFSARGVELPPVQHEDGLDYNALSHILLTPDGSTPDDLAEALFYVNEV STPEGFDSIQDEIAGTDIDVEIGENAAPADLAIQVWMADREIIEKVHAEQFFMNVRSFEYFKTKKNPLPDFVLPSEETLA ALEADLDEWFSKKRRGKYSKVFVYPKEGHTWFLVRHGKPYAREAVIEAGESTSQYFRPEKFDVLAYNPVIGEIRMNAETK GEKELYRKKFGFHLFGNEEFFNERSRFDLEPLRQIGEDALLCDDVDGIEYVRLKEVQVFWGGAHKDVEIRRSEDIFASLR DRGASLPGGGKIIKASFQIKFEGSKTPRSVILSSGNRAQFKRDGDAEIIERWLGLRGFIVGAGGVSDE
Sequences:
>Translated_388_residues MATFNLRRFSKPEMLRRIDRKHLIAFLEPHAAYFSARGVELPPVQHEDGLDYNALSHILLTPDGSTPDDLAEALFYVNEV STPEGFDSIQDEIAGTDIDVEIGENAAPADLAIQVWMADREIIEKVHAEQFFMNVRSFEYFKTKKNPLPDFVLPSEETLA ALEADLDEWFSKKRRGKYSKVFVYPKEGHTWFLVRHGKPYAREAVIEAGESTSQYFRPEKFDVLAYNPVIGEIRMNAETK GEKELYRKKFGFHLFGNEEFFNERSRFDLEPLRQIGEDALLCDDVDGIEYVRLKEVQVFWGGAHKDVEIRRSEDIFASLR DRGASLPGGGKIIKASFQIKFEGSKTPRSVILSSGNRAQFKRDGDAEIIERWLGLRGFIVGAGGVSDE >Mature_387_residues ATFNLRRFSKPEMLRRIDRKHLIAFLEPHAAYFSARGVELPPVQHEDGLDYNALSHILLTPDGSTPDDLAEALFYVNEVS TPEGFDSIQDEIAGTDIDVEIGENAAPADLAIQVWMADREIIEKVHAEQFFMNVRSFEYFKTKKNPLPDFVLPSEETLAA LEADLDEWFSKKRRGKYSKVFVYPKEGHTWFLVRHGKPYAREAVIEAGESTSQYFRPEKFDVLAYNPVIGEIRMNAETKG EKELYRKKFGFHLFGNEEFFNERSRFDLEPLRQIGEDALLCDDVDGIEYVRLKEVQVFWGGAHKDVEIRRSEDIFASLRD RGASLPGGGKIIKASFQIKFEGSKTPRSVILSSGNRAQFKRDGDAEIIERWLGLRGFIVGAGGVSDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44183; Mature: 44052
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFNLRRFSKPEMLRRIDRKHLIAFLEPHAAYFSARGVELPPVQHEDGLDYNALSHILL CCCCCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEE TPDGSTPDDLAEALFYVNEVSTPEGFDSIQDEIAGTDIDVEIGENAAPADLAIQVWMADR CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCH EIIEKVHAEQFFMNVRSFEYFKTKKNPLPDFVLPSEETLAALEADLDEWFSKKRRGKYSK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE VFVYPKEGHTWFLVRHGKPYAREAVIEAGESTSQYFRPEKFDVLAYNPVIGEIRMNAETK EEEEECCCCEEEEEECCCCHHHHHHHHCCCCHHHHCCCCCCEEEEECCEEEEEEECCCCC GEKELYRKKFGFHLFGNEEFFNERSRFDLEPLRQIGEDALLCDDVDGIEYVRLKEVQVFW CHHHHHHHHCCEEEECCHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCEEEEEEEEEEEE GGAHKDVEIRRSEDIFASLRDRGASLPGGGKIIKASFQIKFEGSKTPRSVILSSGNRAQF CCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHEEEECCCCCCC KRDGDAEIIERWLGLRGFIVGAGGVSDE CCCCCHHHHHHHHCCCEEEEECCCCCCC >Mature Secondary Structure ATFNLRRFSKPEMLRRIDRKHLIAFLEPHAAYFSARGVELPPVQHEDGLDYNALSHILL CCCCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEE TPDGSTPDDLAEALFYVNEVSTPEGFDSIQDEIAGTDIDVEIGENAAPADLAIQVWMADR CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCH EIIEKVHAEQFFMNVRSFEYFKTKKNPLPDFVLPSEETLAALEADLDEWFSKKRRGKYSK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE VFVYPKEGHTWFLVRHGKPYAREAVIEAGESTSQYFRPEKFDVLAYNPVIGEIRMNAETK EEEEECCCCEEEEEECCCCHHHHHHHHCCCCHHHHCCCCCCEEEEECCEEEEEEECCCCC GEKELYRKKFGFHLFGNEEFFNERSRFDLEPLRQIGEDALLCDDVDGIEYVRLKEVQVFW CHHHHHHHHCCEEEECCHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCEEEEEEEEEEEE GGAHKDVEIRRSEDIFASLRDRGASLPGGGKIIKASFQIKFEGSKTPRSVILSSGNRAQF CCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHEEEECCCCCCC KRDGDAEIIERWLGLRGFIVGAGGVSDE CCCCCHHHHHHHHCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA