| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356951
Identifier: 78356951
GI number: 78356951
Start: 1961482
End: 1963029
Strand: Reverse
Name: 78356951
Synonym: Dde_1908
Alternate gene names: NA
Gene position: 1963029-1961482 (Counterclockwise)
Preceding gene: 78356952
Following gene: 78356950
Centisome position: 52.62
GC content: 62.47
Gene sequence:
>1548_bases ATGTGCGGCTGTCATGGCCGAAACTACCGAGAGGATCACGTGGAAAGCACCGCCCATCAGGACGAACAACCCGAAAGCCT GGACACCACCGGCTTTGTCATCGCGCCGCTGGCCGCAGCGGCCGCGCTCGACTCGGCGGCCTTCAGCAAGGTCAACGCCG CCGAGGCTATTCCGGCCACCTGGGAAGAACGCGCCCGTAAGGCCTGGGAATACTACGTCGAGGAGCCGCTGGTGAAGAAC TGCGTCAACTCCTGGCGCACCTTCGCCGTGGGCGACGAGATCAAAATCACCAGCGATGACGAGACCCTCAAGGAGCAGGC ACTGGAGGCCGCCTGGCGGTTGAACATCACGCAATTCATCAAGGACATGGTTCTTCAGCTCCTGGTGAAAGGCGACGCCA TCGGCTTCAAGCGCTTCACCAAGTCCGGCCAGGACATCGAGGAACTGGTCTGCGTCAACCCGGTTTCGGTCAAAGTCAAA TACGCCCAGGGCGAGCTGATCGAGGCCCGGCAATTTCCCGAAGACACCCCCGGCGGCGGGGAATCCATCCCGCTGCCCGT CGAACAGGTGGTCCACCTCAAATGGGACGCACCGGCCTTCTCGCCCCGGGGCAACTCCCTCGTGCTTCCCGCCTTTCAAG CCATCGAACTGCTGCGCGACTACCGCCGGGCCGAACAGGCCATCGCCAAGCGCTGGGCCACGCCGTTCCGCCTGCTCAAG GTGGGCGGCGCGTTCGGCCAGAAGATGGTGATGCCGGACCAGCGGATGCTCGAACAGGTCCGCGACATGGTCAACAAGAT GGACATGAAGAGCGGCCTGGTGGTCCCGTTCTACGTCAATGTCGAAACCCACGGCACCGACGGTCAGGTCCTCAACGTCG AGGACAAGGTCAAGGAGGTGAAGGAAGACATCGTGGTGGCCCTGGGTCTGTCACGCTCGCTGGTGACCGGCGACGGTCCG AATTTCGCCACCGCCTCGGTGAGCATGCAGAAGATGATGGTCATGATCCGCGAGATCAAACAGGCCGCACGCAAGCTCCT CGACTGGGTGTTCGACGACTGGATGGAGCTGAACGGCCATGGCGACAAGAGCATTCAGTTCATCTTCAACGACCTCGACC CCAGCGACGCGGTCGATTTCAAAAAGCTCCTCATCGAACTCTACGACCGCAAGCTCATCAGCCGCTCCAGCCTTCAACTC AAGATGGACCTGGACCCGGACATCGAGGCCGCCAACCGCGAGACCGAACGCAAGCAGATCGACCTGATGGACGAGAAGCA GGTGAAGCCGGTGGTGGATATGGTCGTCTCCGGCATTCTCAGCGTGCCTCGCGCCCGCAAGATGCTCGGGATTCCGGCCG AGGACGATGAACCCACGGCGGAGGCTGCATTGGTCTGGTCGGGTGACCTGGAGTCCACCGGCATTGCTGCCGTGTGCGAC GAGTGCAGCCACTTCATCGCTGACACCAACCACTGCCGGGTCCACAACAGCGAGCGCACTTTCGACGCCCCGGCCTGTCG TTTCATCGACCGCCGGGAGCCCCGCTGA
Upstream 100 bases:
>100_bases GCTCACCAATCCGGTCTTCATATGATCGCATCCTCCGACGCTTTCCACCCCGCTCCGGTAAGTAACCGGCATCGAGCCGG GTTCGGCCCACGCGGGCCGG
Downstream 100 bases:
>100_bases TGCCGTCGGACCTCAAGCAGCTCATCCAGGCGGCCACCCTGAAAAGCCTTGCGGCCCGCAACCGCTACAACGACCAGGTC ACGGCCCAACTCACCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPATWEERARKAWEYYVEEPLVKN CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFIKDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVK YAQGELIEARQFPEDTPGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
Sequences:
>Translated_515_residues MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPATWEERARKAWEYYVEEPLVKN CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFIKDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVK YAQGELIEARQFPEDTPGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR >Mature_515_residues MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPATWEERARKAWEYYVEEPLVKN CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFIKDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVK YAQGELIEARQFPEDTPGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57768; Mature: 57768
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPAT CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC WEERARKAWEYYVEEPLVKNCVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFI HHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHH KDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVKYAQGELIEARQFPEDTPGGG HHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCCCCC ESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK CCCCCCHHHHEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECHHHHHHHH KEDIVVALGLSRSLVTGDGPNFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGH HHHHEEHCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQLKMDLDPDIEAANRETERKQI CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH DLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR HHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPAT CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC WEERARKAWEYYVEEPLVKNCVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFI HHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHH KDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVKYAQGELIEARQFPEDTPGGG HHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCCCCC ESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK CCCCCCHHHHEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECHHHHHHHH KEDIVVALGLSRSLVTGDGPNFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGH HHHHEEHCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQLKMDLDPDIEAANRETERKQI CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH DLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR HHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA