Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78356951

Identifier: 78356951

GI number: 78356951

Start: 1961482

End: 1963029

Strand: Reverse

Name: 78356951

Synonym: Dde_1908

Alternate gene names: NA

Gene position: 1963029-1961482 (Counterclockwise)

Preceding gene: 78356952

Following gene: 78356950

Centisome position: 52.62

GC content: 62.47

Gene sequence:

>1548_bases
ATGTGCGGCTGTCATGGCCGAAACTACCGAGAGGATCACGTGGAAAGCACCGCCCATCAGGACGAACAACCCGAAAGCCT
GGACACCACCGGCTTTGTCATCGCGCCGCTGGCCGCAGCGGCCGCGCTCGACTCGGCGGCCTTCAGCAAGGTCAACGCCG
CCGAGGCTATTCCGGCCACCTGGGAAGAACGCGCCCGTAAGGCCTGGGAATACTACGTCGAGGAGCCGCTGGTGAAGAAC
TGCGTCAACTCCTGGCGCACCTTCGCCGTGGGCGACGAGATCAAAATCACCAGCGATGACGAGACCCTCAAGGAGCAGGC
ACTGGAGGCCGCCTGGCGGTTGAACATCACGCAATTCATCAAGGACATGGTTCTTCAGCTCCTGGTGAAAGGCGACGCCA
TCGGCTTCAAGCGCTTCACCAAGTCCGGCCAGGACATCGAGGAACTGGTCTGCGTCAACCCGGTTTCGGTCAAAGTCAAA
TACGCCCAGGGCGAGCTGATCGAGGCCCGGCAATTTCCCGAAGACACCCCCGGCGGCGGGGAATCCATCCCGCTGCCCGT
CGAACAGGTGGTCCACCTCAAATGGGACGCACCGGCCTTCTCGCCCCGGGGCAACTCCCTCGTGCTTCCCGCCTTTCAAG
CCATCGAACTGCTGCGCGACTACCGCCGGGCCGAACAGGCCATCGCCAAGCGCTGGGCCACGCCGTTCCGCCTGCTCAAG
GTGGGCGGCGCGTTCGGCCAGAAGATGGTGATGCCGGACCAGCGGATGCTCGAACAGGTCCGCGACATGGTCAACAAGAT
GGACATGAAGAGCGGCCTGGTGGTCCCGTTCTACGTCAATGTCGAAACCCACGGCACCGACGGTCAGGTCCTCAACGTCG
AGGACAAGGTCAAGGAGGTGAAGGAAGACATCGTGGTGGCCCTGGGTCTGTCACGCTCGCTGGTGACCGGCGACGGTCCG
AATTTCGCCACCGCCTCGGTGAGCATGCAGAAGATGATGGTCATGATCCGCGAGATCAAACAGGCCGCACGCAAGCTCCT
CGACTGGGTGTTCGACGACTGGATGGAGCTGAACGGCCATGGCGACAAGAGCATTCAGTTCATCTTCAACGACCTCGACC
CCAGCGACGCGGTCGATTTCAAAAAGCTCCTCATCGAACTCTACGACCGCAAGCTCATCAGCCGCTCCAGCCTTCAACTC
AAGATGGACCTGGACCCGGACATCGAGGCCGCCAACCGCGAGACCGAACGCAAGCAGATCGACCTGATGGACGAGAAGCA
GGTGAAGCCGGTGGTGGATATGGTCGTCTCCGGCATTCTCAGCGTGCCTCGCGCCCGCAAGATGCTCGGGATTCCGGCCG
AGGACGATGAACCCACGGCGGAGGCTGCATTGGTCTGGTCGGGTGACCTGGAGTCCACCGGCATTGCTGCCGTGTGCGAC
GAGTGCAGCCACTTCATCGCTGACACCAACCACTGCCGGGTCCACAACAGCGAGCGCACTTTCGACGCCCCGGCCTGTCG
TTTCATCGACCGCCGGGAGCCCCGCTGA

Upstream 100 bases:

>100_bases
GCTCACCAATCCGGTCTTCATATGATCGCATCCTCCGACGCTTTCCACCCCGCTCCGGTAAGTAACCGGCATCGAGCCGG
GTTCGGCCCACGCGGGCCGG

Downstream 100 bases:

>100_bases
TGCCGTCGGACCTCAAGCAGCTCATCCAGGCGGCCACCCTGAAAAGCCTTGCGGCCCGCAACCGCTACAACGACCAGGTC
ACGGCCCAACTCACCCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPATWEERARKAWEYYVEEPLVKN
CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFIKDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVK
YAQGELIEARQFPEDTPGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP
NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL
KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR

Sequences:

>Translated_515_residues
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPATWEERARKAWEYYVEEPLVKN
CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFIKDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVK
YAQGELIEARQFPEDTPGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP
NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL
KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
>Mature_515_residues
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPATWEERARKAWEYYVEEPLVKN
CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFIKDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVK
YAQGELIEARQFPEDTPGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP
NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL
KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57768; Mature: 57768

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPAT
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
WEERARKAWEYYVEEPLVKNCVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFI
HHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHH
KDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVKYAQGELIEARQFPEDTPGGG
HHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCCCCC
ESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
CCCCCCHHHHEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEV
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECHHHHHHHH
KEDIVVALGLSRSLVTGDGPNFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGH
HHHHEEHCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQLKMDLDPDIEAANRETERKQI
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH
DLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
HHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFSKVNAAEAIPAT
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
WEERARKAWEYYVEEPLVKNCVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNITQFI
HHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHH
KDMVLQLLVKGDAIGFKRFTKSGQDIEELVCVNPVSVKVKYAQGELIEARQFPEDTPGGG
HHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCCCCC
ESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
CCCCCCHHHHEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEV
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECHHHHHHHH
KEDIVVALGLSRSLVTGDGPNFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGH
HHHHEEHCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQLKMDLDPDIEAANRETERKQI
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH
DLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
HHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA