| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356949
Identifier: 78356949
GI number: 78356949
Start: 1956399
End: 1956911
Strand: Reverse
Name: 78356949
Synonym: Dde_1906
Alternate gene names: NA
Gene position: 1956911-1956399 (Counterclockwise)
Preceding gene: 78356950
Following gene: 78356948
Centisome position: 52.46
GC content: 59.84
Gene sequence:
>513_bases ATGACCATGAAGGACTTTACCGAACAGGAGAAACGGCGGCTGCAGGAATCGCTGCACTGGTTCAACAGCCGGGGCAGCCG CATGACGGTCAGAGAATCCGGGGATCTCTTTCTGGACACCCTGGTGGACAGCTTCACCGTCACCCGGATCGCACCCCATT TCGACGCTGCTGGCAACCATCTGCGCACCGATTTCTGGCTGTTGTGGAAAGCGCTCGGTTACGACGAGGGCTTCCAGCAC GCCCACACCGTCAAGGTGGTGGATGTCCGGGTCGAAGACACCCTGACAGCCGAACATGACGGTAAGAAGGCCGAAGGGTG GCTGATTGTCGAGCTGACCGACGACCTGGGCCGCATTCACCATGTCGAAATGATCGAGCCGGTCTCGGAGCCCGAACTCG CGGCGGATTGGCAACGCTGGATCTCCTACAGGAAGAAGAACGCCGAGAGATTCCGCCGGATCGACGACCAGCTTCTGGCC GAACATCTCCTGATCGCGGAGGACTGGTCATGA
Upstream 100 bases:
>100_bases TCATCCAGAGTTTCACCCGGCGTGGCATCAAGAAACTGCCCGACGGGCGCAAGGTGGAGGACATCGTCCATACCTCGCAA AGCTGGAGCAAACGCAAACA
Downstream 100 bases:
>100_bases AACTGCGCTATATGATCGACTCGATAATGGCCGACCGGCAAGCCACCGTCCCGGAATACTTGCCCGTGGGCGTCTGGGTT CAGGGGCCGGGTCCCGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTMKDFTEQEKRRLQESLHWFNSRGSRMTVRESGDLFLDTLVDSFTVTRIAPHFDAAGNHLRTDFWLLWKALGYDEGFQH AHTVKVVDVRVEDTLTAEHDGKKAEGWLIVELTDDLGRIHHVEMIEPVSEPELAADWQRWISYRKKNAERFRRIDDQLLA EHLLIAEDWS
Sequences:
>Translated_170_residues MTMKDFTEQEKRRLQESLHWFNSRGSRMTVRESGDLFLDTLVDSFTVTRIAPHFDAAGNHLRTDFWLLWKALGYDEGFQH AHTVKVVDVRVEDTLTAEHDGKKAEGWLIVELTDDLGRIHHVEMIEPVSEPELAADWQRWISYRKKNAERFRRIDDQLLA EHLLIAEDWS >Mature_169_residues TMKDFTEQEKRRLQESLHWFNSRGSRMTVRESGDLFLDTLVDSFTVTRIAPHFDAAGNHLRTDFWLLWKALGYDEGFQHA HTVKVVDVRVEDTLTAEHDGKKAEGWLIVELTDDLGRIHHVEMIEPVSEPELAADWQRWISYRKKNAERFRRIDDQLLAE HLLIAEDWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20016; Mature: 19884
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKDFTEQEKRRLQESLHWFNSRGSRMTVRESGDLFLDTLVDSFTVTRIAPHFDAAGNH CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC LRTDFWLLWKALGYDEGFQHAHTVKVVDVRVEDTLTAEHDGKKAEGWLIVELTDDLGRIH HHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHH HVEMIEPVSEPELAADWQRWISYRKKNAERFRRIDDQLLAEHLLIAEDWS HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TMKDFTEQEKRRLQESLHWFNSRGSRMTVRESGDLFLDTLVDSFTVTRIAPHFDAAGNH CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC LRTDFWLLWKALGYDEGFQHAHTVKVVDVRVEDTLTAEHDGKKAEGWLIVELTDDLGRIH HHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHH HVEMIEPVSEPELAADWQRWISYRKKNAERFRRIDDQLLAEHLLIAEDWS HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA