Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is ykgG [C]

Identifier: 78356887

GI number: 78356887

Start: 1894992

End: 1895648

Strand: Direct

Name: ykgG [C]

Synonym: Dde_1844

Alternate gene names: 78356887

Gene position: 1894992-1895648 (Clockwise)

Preceding gene: 78356886

Following gene: 78356888

Centisome position: 50.8

GC content: 54.64

Gene sequence:

>657_bases
ATGAGTAGTCAGGCTCGTGAGCACATTCTGGAACGGCTGTACAAATCTGCCGGCAGCGTTGCGGCGCCCGCTCCGTCAAC
AGACTGGGAGCCGCCTGTATTCACTGAAAAAGAGAAGGAAGAACGCTTCGTCAGATTGCTTGAAACCATGAAGGCCGAGG
TTGTTTCCGTCAAAAAGAAAGAACTCTTCACGACACTGCGGCGCCTGCTGGCCGAAAAAAACATCACCAGACTGGCATAC
GGTGCCGGCTCAAAGCTGGCAAAACAGCTGGAAGCATCATGGAAGCAGAGTAAAAGCACCACCGGACTCGTAGCGGTTTC
CGGCAGTGCCGAGGCCTTCAGGGATGAACTGTTCTCTATAGAGGCGGGCATCACATCTTCTCTGGGCGGCATTGCGGATA
CCGGAGCCATCATACTCTGGCCGGACAAGCATGAGCCTCGTCTGCTTTCGCTTGTGCCGCCGCTGCATATTGTGATTGTC
GATAAAAATCAGCTTTTTTCATCCTTTTCCGAGGCCATGGCCGCACAGAACTGGGCAGGGCAGATGCCTACCAACGCGCT
GCTGGTCTCCGGCCCTTCCAAAACAGCTGACATAGAGCTGATCCTTCAGTTCGGTGTCCACGGTCCCAAGGAACTGCTTG
TTCTGCTGACCGACTGA

Upstream 100 bases:

>100_bases
CCCAAAGTCGGCCCCCTGAAGGCGTGGACAAGCGTACGCACCACCCCGAAATTCGCACCCAAAAGTCTGCATGACCTTGC
AAAAGAGGAGGGCATACGCG

Downstream 100 bases:

>100_bases
CCGTGTTCCCGCTTTCAAGAGCAGCCATACGACAGGCGGCATGACAACCGCCTGTCGTACGGCTGGTATCACGACGCAGG
CTCCGGCCTTTTTGCCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSSQAREHILERLYKSAGSVAAPAPSTDWEPPVFTEKEKEERFVRLLETMKAEVVSVKKKELFTTLRRLLAEKNITRLAY
GAGSKLAKQLEASWKQSKSTTGLVAVSGSAEAFRDELFSIEAGITSSLGGIADTGAIILWPDKHEPRLLSLVPPLHIVIV
DKNQLFSSFSEAMAAQNWAGQMPTNALLVSGPSKTADIELILQFGVHGPKELLVLLTD

Sequences:

>Translated_218_residues
MSSQAREHILERLYKSAGSVAAPAPSTDWEPPVFTEKEKEERFVRLLETMKAEVVSVKKKELFTTLRRLLAEKNITRLAY
GAGSKLAKQLEASWKQSKSTTGLVAVSGSAEAFRDELFSIEAGITSSLGGIADTGAIILWPDKHEPRLLSLVPPLHIVIV
DKNQLFSSFSEAMAAQNWAGQMPTNALLVSGPSKTADIELILQFGVHGPKELLVLLTD
>Mature_217_residues
SSQAREHILERLYKSAGSVAAPAPSTDWEPPVFTEKEKEERFVRLLETMKAEVVSVKKKELFTTLRRLLAEKNITRLAYG
AGSKLAKQLEASWKQSKSTTGLVAVSGSAEAFRDELFSIEAGITSSLGGIADTGAIILWPDKHEPRLLSLVPPLHIVIVD
KNQLFSSFSEAMAAQNWAGQMPTNALLVSGPSKTADIELILQFGVHGPKELLVLLTD

Specific function: Unknown

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 23798; Mature: 23666

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQAREHILERLYKSAGSVAAPAPSTDWEPPVFTEKEKEERFVRLLETMKAEVVSVKKK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELFTTLRRLLAEKNITRLAYGAGSKLAKQLEASWKQSKSTTGLVAVSGSAEAFRDELFSI
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
EAGITSSLGGIADTGAIILWPDKHEPRLLSLVPPLHIVIVDKNQLFSSFSEAMAAQNWAG
HCCCHHHCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCC
QMPTNALLVSGPSKTADIELILQFGVHGPKELLVLLTD
CCCCCEEEEECCCCCCHHHHHEECCCCCHHHEEEEECC
>Mature Secondary Structure 
SSQAREHILERLYKSAGSVAAPAPSTDWEPPVFTEKEKEERFVRLLETMKAEVVSVKKK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELFTTLRRLLAEKNITRLAYGAGSKLAKQLEASWKQSKSTTGLVAVSGSAEAFRDELFSI
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
EAGITSSLGGIADTGAIILWPDKHEPRLLSLVPPLHIVIVDKNQLFSSFSEAMAAQNWAG
HCCCHHHCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCC
QMPTNALLVSGPSKTADIELILQFGVHGPKELLVLLTD
CCCCCEEEEECCCCCCHHHHHEECCCCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]