| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is wcaC [C]
Identifier: 78356879
GI number: 78356879
Start: 1886792
End: 1887931
Strand: Direct
Name: wcaC [C]
Synonym: Dde_1836
Alternate gene names: 78356879
Gene position: 1886792-1887931 (Clockwise)
Preceding gene: 78356878
Following gene: 78356881
Centisome position: 50.58
GC content: 60.0
Gene sequence:
>1140_bases ATGACAGCCTCGTCCGGCATTCTGATGCACAGCATGCTGTGCAGGCGCGGCGGTGCGGCACGGGTGGCCACCCTGCTGCA CAACGAACTTTGTGCACCGGAAATGCCATACCGCGTTGTCCGCAGCACAGAATACGACGACAGTGACCCGCTCCTGCCTG AAGAGGGGCAATGTCAGTGCATAACAACAGCACCTGCCCGGAGCTTATTCTCTGAGCCCTGTGACGTTCTGCACCTGCAC AGCACCTGCGACTGGCAGCGCCTGCTGAGCGATGCCCAGCGCTTCTCGCAGGTGGTCATCACGCTGCACGACGCATCGCT TCTCACCGGCGGCTGTCCTTTTCCGCTGGCGTGCAGTGGCTGGAAGGACGGGTGTTCTGACCCTTGCCCGCGCGGCTACC CGTATGCCGCAGCACGGCAGGCCGCTCTCAGGGGGGCGCTGGAAAAGCTCTGTGCCGTGTCAGCCGTTCAGATGGTATCT CCCAGCCTGTGGCTGAAAAAAATGGCCGGACAGGCAGTTTCGGGCATACCCTGCCATGTGATACCCAACGGTGTTGAAGA TACATTTTTTACGGAAGGAAAGAATGCAGCCCGGAAACGTCTGGGCATTGCTGCAGCAGCCAGAGTCATACTCATGCTTG CCCACGGAGGGCAGCAGGCGGCATACAAGGCGGGTGAACAATGGGAAGGATTATGGCGGAGCGTGCGCGGCAGGCGCGAC ATCATATGCATAATGGCGGGCGGTGACAGCTGCCGGACAGAAGAACGTCTGCTGGTACTGCCGTATCTTGACCGCCGGCA CCTGTCGCTGGTGCTCACGGCCGCTGACCTGCTGGTGTACCCCACACTGGCGGACAATCATCCTCTGGTGGTTCTTGAAG CTTTTTCAGCAGGTACCCCTGTTGTGGCCTTTGCCGAGGGGGGCGTACCGGAACAGATCGACCGCAAGACAGGCAGGCTT GTTCAGCCCGGAAACTGGCCCGCCATGACAGAACAGATTCTGCACCTGACGGCAGACCGGACCGGACTGAAAAAAATGGG AGAAGCTGCAAGAACCTGCTGGTTGAACCGCTTTACTGCGCGGCGTATGGCACAGGACTATGTCAGACTGTATCACCGGC ACGGCCAGTCTGCGGAGTAA
Upstream 100 bases:
>100_bases CCAATATTGAAGCCGTGCTGGTGCAGCATTGCGGCATGACTGCCGAAGATGCCTGTTTCCTGCTTCTCTGGGCCCTGAAA CAGGATTTGCTGGAGCGGGT
Downstream 100 bases:
>100_bases CCGGACAGCCCCCCGCAAGAGTCTCTTTCAGCCTGCAGTGAAATTCATCGAACGTTTTTTTACTGTAGAGCATGAAAATA TGGCTCACCGGATGCACCTC
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1/2 Family Protein; LPS Glycosyltransferase; 1 2-Diacylglycerol 3-Glucosyltransferase; Glycosyltransferase-Like Protein; Glysosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTASSGILMHSMLCRRGGAARVATLLHNELCAPEMPYRVVRSTEYDDSDPLLPEEGQCQCITTAPARSLFSEPCDVLHLH STCDWQRLLSDAQRFSQVVITLHDASLLTGGCPFPLACSGWKDGCSDPCPRGYPYAAARQAALRGALEKLCAVSAVQMVS PSLWLKKMAGQAVSGIPCHVIPNGVEDTFFTEGKNAARKRLGIAAAARVILMLAHGGQQAAYKAGEQWEGLWRSVRGRRD IICIMAGGDSCRTEERLLVLPYLDRRHLSLVLTAADLLVYPTLADNHPLVVLEAFSAGTPVVAFAEGGVPEQIDRKTGRL VQPGNWPAMTEQILHLTADRTGLKKMGEAARTCWLNRFTARRMAQDYVRLYHRHGQSAE
Sequences:
>Translated_379_residues MTASSGILMHSMLCRRGGAARVATLLHNELCAPEMPYRVVRSTEYDDSDPLLPEEGQCQCITTAPARSLFSEPCDVLHLH STCDWQRLLSDAQRFSQVVITLHDASLLTGGCPFPLACSGWKDGCSDPCPRGYPYAAARQAALRGALEKLCAVSAVQMVS PSLWLKKMAGQAVSGIPCHVIPNGVEDTFFTEGKNAARKRLGIAAAARVILMLAHGGQQAAYKAGEQWEGLWRSVRGRRD IICIMAGGDSCRTEERLLVLPYLDRRHLSLVLTAADLLVYPTLADNHPLVVLEAFSAGTPVVAFAEGGVPEQIDRKTGRL VQPGNWPAMTEQILHLTADRTGLKKMGEAARTCWLNRFTARRMAQDYVRLYHRHGQSAE >Mature_378_residues TASSGILMHSMLCRRGGAARVATLLHNELCAPEMPYRVVRSTEYDDSDPLLPEEGQCQCITTAPARSLFSEPCDVLHLHS TCDWQRLLSDAQRFSQVVITLHDASLLTGGCPFPLACSGWKDGCSDPCPRGYPYAAARQAALRGALEKLCAVSAVQMVSP SLWLKKMAGQAVSGIPCHVIPNGVEDTFFTEGKNAARKRLGIAAAARVILMLAHGGQQAAYKAGEQWEGLWRSVRGRRDI ICIMAGGDSCRTEERLLVLPYLDRRHLSLVLTAADLLVYPTLADNHPLVVLEAFSAGTPVVAFAEGGVPEQIDRKTGRLV QPGNWPAMTEQILHLTADRTGLKKMGEAARTCWLNRFTARRMAQDYVRLYHRHGQSAE
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41477; Mature: 41346
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00615 C_TYPE_LECTIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSGILMHSMLCRRGGAARVATLLHNELCAPEMPYRVVRSTEYDDSDPLLPEEGQCQC CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEE ITTAPARSLFSEPCDVLHLHSTCDWQRLLSDAQRFSQVVITLHDASLLTGGCPFPLACSG EECHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCHHHCCCCCCCCCCCC WKDGCSDPCPRGYPYAAARQAALRGALEKLCAVSAVQMVSPSLWLKKMAGQAVSGIPCHV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEE IPNGVEDTFFTEGKNAARKRLGIAAAARVILMLAHGGQQAAYKAGEQWEGLWRSVRGRRD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCC IICIMAGGDSCRTEERLLVLPYLDRRHLSLVLTAADLLVYPTLADNHPLVVLEAFSAGTP EEEEEECCCCCCCCCCEEEECCCCCCHHHHHEEHHHHHEECEECCCCCEEEEEECCCCCC VVAFAEGGVPEQIDRKTGRLVQPGNWPAMTEQILHLTADRTGLKKMGEAARTCWLNRFTA EEEEECCCCCHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RRMAQDYVRLYHRHGQSAE HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TASSGILMHSMLCRRGGAARVATLLHNELCAPEMPYRVVRSTEYDDSDPLLPEEGQCQC CCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEE ITTAPARSLFSEPCDVLHLHSTCDWQRLLSDAQRFSQVVITLHDASLLTGGCPFPLACSG EECHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCHHHCCCCCCCCCCCC WKDGCSDPCPRGYPYAAARQAALRGALEKLCAVSAVQMVSPSLWLKKMAGQAVSGIPCHV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEE IPNGVEDTFFTEGKNAARKRLGIAAAARVILMLAHGGQQAAYKAGEQWEGLWRSVRGRRD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCC IICIMAGGDSCRTEERLLVLPYLDRRHLSLVLTAADLLVYPTLADNHPLVVLEAFSAGTP EEEEEECCCCCCCCCCEEEECCCCCCHHHHHEEHHHHHEECEECCCCCEEEEEECCCCCC VVAFAEGGVPEQIDRKTGRLVQPGNWPAMTEQILHLTADRTGLKKMGEAARTCWLNRFTA EEEEECCCCCHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RRMAQDYVRLYHRHGQSAE HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA