| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ftnA [H]
Identifier: 78356834
GI number: 78356834
Start: 1842056
End: 1842616
Strand: Direct
Name: ftnA [H]
Synonym: Dde_1791
Alternate gene names: 78356834
Gene position: 1842056-1842616 (Clockwise)
Preceding gene: 78356832
Following gene: 78356835
Centisome position: 49.38
GC content: 51.16
Gene sequence:
>561_bases ATGCCGATTACTTTTATGAACATCAAAGCCGGTATAACATCGGGAGAAAACATGCTTAGTCAGACAATGGAAAAAGCCTT TAATGATCAGGTCAAGTGGGAGCTGTATTCAAGCTATCTGTACCTGTCCATGTCGTCATACTGCAACAACCTCGGACTGG CGGGTTTTGCAAACTGGATGCGGATGCAGGCTCAGGAAGAGTTATTCCATGCCATGAAGTTTTATGATTACATCATGGAA CGGGGCGGAAGAGCCATCATGCAGCCCATTGACGCACCGCCCAGCGAGTGGGGCGGGCCTCTCGACGTATTTGAAAAGGT GCTGGAGCATGAAAAGCATGTCACCGGCCTTATCCATACGCTTGCCGATCTTGCTCTGGACGAACGCGACCATGCCGGTT CGATTTTCCTGCAGTGGTTTATTTCGGAGCAAGTGGAAGAAGAAGCCACAGTGGCAGATCTGGTACATAAGCTGCGGCTT ATAGGCGGTGAAGGTCAGGGCCTGCTGATGCTTGATAAAGAGCTTTCGGCCCGAGTCTTCACCCCGCCTGCGCAGGCTTA G
Upstream 100 bases:
>100_bases CAACGCTCTCATAGCGTAAGGAACCATCGCTGGCAACTATGAAATCAAGGATAGTCCTTGCAGATTTCCTTCTGTCATGT ATGATGGAAGATAGTGCAAC
Downstream 100 bases:
>100_bases CGGCGTTGCCCGGGCGTCTGGAAAAACGCCCCTGTCCACCAACACAAGGAGCTTCACGTGGAAACGAAAGACAAGCATAT CGTCATAGGCGGCGAGGCCG
Product: ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWMRMQAQEELFHAMKFYDYIME RGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHTLADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRL IGGEGQGLLMLDKELSARVFTPPAQA
Sequences:
>Translated_186_residues MPITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWMRMQAQEELFHAMKFYDYIME RGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHTLADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRL IGGEGQGLLMLDKELSARVFTPPAQA >Mature_185_residues PITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWMRMQAQEELFHAMKFYDYIMER GGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHTLADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRLI GGEGQGLLMLDKELSARVFTPPAQA
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Homo sapiens, GI56682959, Length=152, Percent_Identity=36.1842105263158, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI29126241, Length=167, Percent_Identity=33.5329341317365, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1788216, Length=160, Percent_Identity=36.875, Blast_Score=117, Evalue=4e-28, Organism=Escherichia coli, GI1788212, Length=139, Percent_Identity=28.7769784172662, Blast_Score=69, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17506345, Length=156, Percent_Identity=34.6153846153846, Blast_Score=76, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17558956, Length=156, Percent_Identity=32.6923076923077, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 21049; Mature: 20918
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWM CCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RMQAQEELFHAMKFYDYIMERGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHT HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRLIGGEGQGLLMLDKELSARVF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEC TPPAQA CCCCCC >Mature Secondary Structure PITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWM CEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RMQAQEELFHAMKFYDYIMERGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHT HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRLIGGEGQGLLMLDKELSARVF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEC TPPAQA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA