| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ppaC [H]
Identifier: 78356821
GI number: 78356821
Start: 1830427
End: 1831344
Strand: Direct
Name: ppaC [H]
Synonym: Dde_1778
Alternate gene names: 78356821
Gene position: 1830427-1831344 (Clockwise)
Preceding gene: 78356820
Following gene: 78356824
Centisome position: 49.07
GC content: 54.47
Gene sequence:
>918_bases ATGGCTGTACTCGTAATGGGCCACATGAACCCGGATACCGACTCCATCGTTTCCGCACTTGCCGTCGCCGACCTTATGTC CAAGCGCGGCGTGGAAGCCACCGCTGTAGCTCAGGGCGAATGCACCCCTGAGAGCACTTTTGTTCTGGAAAAATTCGGCC TTGCCGCTCCTGAAGTCGTAACTTCCGTTGCCGGTAAAGACCTGATTCTGGTGGACACCACCGACGGCGCCCAGCTGCCC GCCGACATCGCCGATGCAGAAATCAAAGGCGTGGTCGACCACCACAAGCTTGGCAACGTGACTACCTCCAACCCGCTGGA AATGTGGGTATGGCCTGTGGGTTGTTCCTGCACCGTGATCAAGGCCATGTACGATTTTTACGGCATCGAAGTGCCCAAGG GTATTGCAGGCGGCATGCTGTGTGCAATCCTCAGCGACACCGTCATGTTCAAGTCGGTCACCTGCACCGAACAGGACAAG AAAGCTGTGGAAGAACTTGCCAAGATCGCCGGTGTAAGCGATGTCATGGCTCTGGGCATGGAAATGTTCAAGGTGAAGTC CGCTGTTGAAGGCGCCACCATGAGCGAACTGGTTTTCCGTGACTACAAAGATTTCGACATGAACGGCAGCAAAGTTGGCA TCGGCCAGCTGGAAGTTGTCGACCTGAGCATCCTTGATCCGGTCAAGGACGGCCTGTACGAAGAAATTCAGAAAGTGAAG GCCGACGGCCGTCACTCTGTATTTCTGCTGCTCACGGACATCATGAAGGAAGGCAGCGAAATGCTGATCGTTTCCGATGA TACCGTTGTAGTTGAAAAAGCTTTCGGCGTTAAGCCCGAAGGCCGCTCCGTATGGCTGGACGGCGTTATGAGCCGTAAGA AGCAGGTTGTGCCCAACTTTGAAAAGGCCTTCAAATAA
Upstream 100 bases:
>100_bases CCCCACTTGGCAGTTGCGCCAGATTGTGCTATTTGGCACAAACTCACTTGGCGCTAAGCGAACCTTCGCTTTCCTAACAA GATTTATGGAGGATTTCACC
Downstream 100 bases:
>100_bases GCTTCCGAGCCTGACTGTAAAAGCCCGCCTTACGGCGGGCTTTTTTAATTATCAAGTACACCTGTACCTGAGGCTCTTAT CGGAAACAAAAGCGCGGAGG
Product: putative manganese-dependent inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVVTSVAGKDLILVDTTDGAQLP ADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVIKAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDK KAVEELAKIAGVSDVMALGMEMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNFEKAFK
Sequences:
>Translated_305_residues MAVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVVTSVAGKDLILVDTTDGAQLP ADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVIKAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDK KAVEELAKIAGVSDVMALGMEMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNFEKAFK >Mature_304_residues AVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVVTSVAGKDLILVDTTDGAQLPA DIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVIKAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDKK AVEELAKIAGVSDVMALGMEMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVKA DGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNFEKAFK
Specific function: Unknown
COG id: COG1227
COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase class C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004097 - InterPro: IPR022934 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02833 DHHA2 [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 32821; Mature: 32690
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVV CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHH TSVAGKDLILVDTTDGAQLPADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVI HHHCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHH KAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDKKAVEELAKIAGVSDVMALGM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCHHHHHHHHH EMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHH ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNF CCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEHHCCCCCCCCEEEHHHHHHHHHHCCCCH EKAFK HHHCC >Mature Secondary Structure AVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVV EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHH TSVAGKDLILVDTTDGAQLPADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVI HHHCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHH KAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDKKAVEELAKIAGVSDVMALGM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCHHHHHHHHH EMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHH ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNF CCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEHHCCCCCCCCEEEHHHHHHHHHHCCCCH EKAFK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]