Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is ppaC [H]

Identifier: 78356821

GI number: 78356821

Start: 1830427

End: 1831344

Strand: Direct

Name: ppaC [H]

Synonym: Dde_1778

Alternate gene names: 78356821

Gene position: 1830427-1831344 (Clockwise)

Preceding gene: 78356820

Following gene: 78356824

Centisome position: 49.07

GC content: 54.47

Gene sequence:

>918_bases
ATGGCTGTACTCGTAATGGGCCACATGAACCCGGATACCGACTCCATCGTTTCCGCACTTGCCGTCGCCGACCTTATGTC
CAAGCGCGGCGTGGAAGCCACCGCTGTAGCTCAGGGCGAATGCACCCCTGAGAGCACTTTTGTTCTGGAAAAATTCGGCC
TTGCCGCTCCTGAAGTCGTAACTTCCGTTGCCGGTAAAGACCTGATTCTGGTGGACACCACCGACGGCGCCCAGCTGCCC
GCCGACATCGCCGATGCAGAAATCAAAGGCGTGGTCGACCACCACAAGCTTGGCAACGTGACTACCTCCAACCCGCTGGA
AATGTGGGTATGGCCTGTGGGTTGTTCCTGCACCGTGATCAAGGCCATGTACGATTTTTACGGCATCGAAGTGCCCAAGG
GTATTGCAGGCGGCATGCTGTGTGCAATCCTCAGCGACACCGTCATGTTCAAGTCGGTCACCTGCACCGAACAGGACAAG
AAAGCTGTGGAAGAACTTGCCAAGATCGCCGGTGTAAGCGATGTCATGGCTCTGGGCATGGAAATGTTCAAGGTGAAGTC
CGCTGTTGAAGGCGCCACCATGAGCGAACTGGTTTTCCGTGACTACAAAGATTTCGACATGAACGGCAGCAAAGTTGGCA
TCGGCCAGCTGGAAGTTGTCGACCTGAGCATCCTTGATCCGGTCAAGGACGGCCTGTACGAAGAAATTCAGAAAGTGAAG
GCCGACGGCCGTCACTCTGTATTTCTGCTGCTCACGGACATCATGAAGGAAGGCAGCGAAATGCTGATCGTTTCCGATGA
TACCGTTGTAGTTGAAAAAGCTTTCGGCGTTAAGCCCGAAGGCCGCTCCGTATGGCTGGACGGCGTTATGAGCCGTAAGA
AGCAGGTTGTGCCCAACTTTGAAAAGGCCTTCAAATAA

Upstream 100 bases:

>100_bases
CCCCACTTGGCAGTTGCGCCAGATTGTGCTATTTGGCACAAACTCACTTGGCGCTAAGCGAACCTTCGCTTTCCTAACAA
GATTTATGGAGGATTTCACC

Downstream 100 bases:

>100_bases
GCTTCCGAGCCTGACTGTAAAAGCCCGCCTTACGGCGGGCTTTTTTAATTATCAAGTACACCTGTACCTGAGGCTCTTAT
CGGAAACAAAAGCGCGGAGG

Product: putative manganese-dependent inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVVTSVAGKDLILVDTTDGAQLP
ADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVIKAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDK
KAVEELAKIAGVSDVMALGMEMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK
ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNFEKAFK

Sequences:

>Translated_305_residues
MAVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVVTSVAGKDLILVDTTDGAQLP
ADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVIKAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDK
KAVEELAKIAGVSDVMALGMEMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK
ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNFEKAFK
>Mature_304_residues
AVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVVTSVAGKDLILVDTTDGAQLPA
DIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVIKAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDKK
AVEELAKIAGVSDVMALGMEMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVKA
DGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNFEKAFK

Specific function: Unknown

COG id: COG1227

COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PPase class C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004097
- InterPro:   IPR022934
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02833 DHHA2 [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 32821; Mature: 32690

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVV
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHH
TSVAGKDLILVDTTDGAQLPADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVI
HHHCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHH
KAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDKKAVEELAKIAGVSDVMALGM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCHHHHHHHHH
EMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHH
ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNF
CCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEHHCCCCCCCCEEEHHHHHHHHHHCCCCH
EKAFK
HHHCC
>Mature Secondary Structure 
AVLVMGHMNPDTDSIVSALAVADLMSKRGVEATAVAQGECTPESTFVLEKFGLAAPEVV
EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHH
TSVAGKDLILVDTTDGAQLPADIADAEIKGVVDHHKLGNVTTSNPLEMWVWPVGCSCTVI
HHHCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHH
KAMYDFYGIEVPKGIAGGMLCAILSDTVMFKSVTCTEQDKKAVEELAKIAGVSDVMALGM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCHHHHHHHHH
EMFKVKSAVEGATMSELVFRDYKDFDMNGSKVGIGQLEVVDLSILDPVKDGLYEEIQKVK
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHH
ADGRHSVFLLLTDIMKEGSEMLIVSDDTVVVEKAFGVKPEGRSVWLDGVMSRKKQVVPNF
CCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEHHCCCCCCCCEEEHHHHHHHHHHCCCCH
EKAFK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]