Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 78356798

GI number: 78356798

Start: 1811437

End: 1813254

Strand: Reverse

Name: mcp4 [H]

Synonym: Dde_1755

Alternate gene names: 78356798

Gene position: 1813254-1811437 (Counterclockwise)

Preceding gene: 78356802

Following gene: 78356797

Centisome position: 48.61

GC content: 55.61

Gene sequence:

>1818_bases
ATGATCCGTCGTGTTACCATCAGTTCACGCATATGGTTTTTGTGTGCGCTGCTTTTTCTTGTCCCTTCTGTAATTCTTTT
CATGTACTGGAACTCTGCAAGCAAACTTGCAGACATCAGCAAAACTGAATTCCGTAATGCTATCGAACAGGGCGAGCGCC
ACAAAATAGAGATCGCCACTTCTGTACTGGCTGAATCGCTTGCTGTAGCCCTGCAGGACGTCACTGATCCTGCGCGGCAG
GCAGTTGTGGTACAAAATGCTCTGGATAAAATACGGTTTGAGCAGGATAGCTCGGGTTATTTTTATGCATACAGAGGCAC
CGTCTGCGTGGCCCACGCCACATCCCCTGCCCTGATCAATAAAGACCTGAGCGGACTTAAAGCCGCTGACGGTACCTATA
TTATACGCTCACTTTTCAGACTGGCACAAAACGGGGGTGGCGTAATGGCTTTTCCGTGGGAAAAGCCAGGCGAAGGAATG
CAGGATAAAATAGGCACCGCACGCTTTATTCCCGGCACTGACATCTGGATAGGTACCGGCGTATATCTTTCCAACATCGC
AAAAGCCGAGACCGCCTTGCAGCAGACCCTGACTCGCAGTATCCGGCCGCTGCTTGTTACCACCATCGGCGCGCTGGCGG
CCGCGGGCCTGCTGGGTATTCTTCCGCTATGCTTCATTATCACCCGCAGCATACTTACCCCCCTCAGAGAGGCTGTGCAG
GGTGCCGGCAGGATTGCCGACGGCTCGCTTGATGTGCAGCTGAAAGATGACGGCAACGACGAGCTGGCTGCCCTTATGCG
GGCACTGAACACCATGACCCGTAATCTGGCAGAGACCCATGTCCGGCTGGAAACAGCGCTGGAGGAAGCACGGGAAGAAT
CGCGCAAGGCCGGAACGGCCCGCAGTGAAGCCGAAGAAAGCAAAGCGCAGGTTGAGCGTTCCTATGGAGAGCTTCTGGCC
ACCGCCGGGGTGCTGGAAGAAACCGTAACGGCAGCAACCGACGCCATGAACGCCGTGCAGAACAACATGCAGAGCCTGAG
GAAAAATTCCGCCGCACAGCAGGGTCAGATGGCCGAGATAGAACAGACTGCGGAAAGCCTTTCCAGAGCGTCCCGTCTTA
TAGGATCACTCAGCGAAGAGACCATGACACAGGGCGAAGCGGAAAAAGCGGCCGCGGCCAAGGGCGTGGACAGAGTGACC
GCCTCGGTAGAATCCATACGCGCCATACAGACACAGGCCGGTTTGCTGAGCGAGGAGATGGCCGCGCTTGAAGACCATGC
AGGCTCCATCACCAAAGTTCTGCACGTTATTTCAGATATAGCGGATCAGACGAATCTGCTGGCGCTTAACGCGGCGATCG
AGGCGGCCCGCGCCGGAGATGCCGGACGGGGCTTTGCCGTGGTGGCGGACGAAGTACGCAAACTGGCTGAAAAAACCATG
ACTGCCACCCAGGAGGTGGGCCAGATAATTTCTGGCATTCAGCAATCGGCCCGTACCAATGCCCAATCCATGCTGACCAT
GGCAGAGAGTGTTTCTTCCGCGGCCAGACAGGCGGAAGATTCCGGCCATGACCTGAAGCAGATAGCCGCAGGTGTGGAGA
CAGCCTTTGTCCGGTCGGAAAGCATTTTCCGTGCGGCTGAAAGCCAGAACAGAGAAGTGGAAAACGTCACACAGGCTCTT
GCTGCCATGGACGGTGTCATCGGAGAATCCGATCTCAGTGTACAGAGCACAGACTCTGCTGTCGGTAATCTGCTGGCAGA
GATGAATAAACTGCAGACCGTAATTGCGGATTTGCACCGTCACACGCGGAAACGGTAA

Upstream 100 bases:

>100_bases
TCGCCTTCCGCGGGTTGCCGCCTCCGGAATCGAGATAAAAAGCGGCCTGCTGCGGTCCCATTCTCTTTTCCGTCATTCAT
GTCACTTTTTGGGGGAATCA

Downstream 100 bases:

>100_bases
CTTTCCCGATGGCGCAGTGCAGATTGCTGCGCGCGGGCAAATATGACAGCCGCTCCGACTTCCGGAGCGGCTGTTTTTTA
TAGAAAAAAGGAAGTGCTAC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MIRRVTISSRIWFLCALLFLVPSVILFMYWNSASKLADISKTEFRNAIEQGERHKIEIATSVLAESLAVALQDVTDPARQ
AVVVQNALDKIRFEQDSSGYFYAYRGTVCVAHATSPALINKDLSGLKAADGTYIIRSLFRLAQNGGGVMAFPWEKPGEGM
QDKIGTARFIPGTDIWIGTGVYLSNIAKAETALQQTLTRSIRPLLVTTIGALAAAGLLGILPLCFIITRSILTPLREAVQ
GAGRIADGSLDVQLKDDGNDELAALMRALNTMTRNLAETHVRLETALEEAREESRKAGTARSEAEESKAQVERSYGELLA
TAGVLEETVTAATDAMNAVQNNMQSLRKNSAAQQGQMAEIEQTAESLSRASRLIGSLSEETMTQGEAEKAAAAKGVDRVT
ASVESIRAIQTQAGLLSEEMAALEDHAGSITKVLHVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM
TATQEVGQIISGIQQSARTNAQSMLTMAESVSSAARQAEDSGHDLKQIAAGVETAFVRSESIFRAAESQNREVENVTQAL
AAMDGVIGESDLSVQSTDSAVGNLLAEMNKLQTVIADLHRHTRKR

Sequences:

>Translated_605_residues
MIRRVTISSRIWFLCALLFLVPSVILFMYWNSASKLADISKTEFRNAIEQGERHKIEIATSVLAESLAVALQDVTDPARQ
AVVVQNALDKIRFEQDSSGYFYAYRGTVCVAHATSPALINKDLSGLKAADGTYIIRSLFRLAQNGGGVMAFPWEKPGEGM
QDKIGTARFIPGTDIWIGTGVYLSNIAKAETALQQTLTRSIRPLLVTTIGALAAAGLLGILPLCFIITRSILTPLREAVQ
GAGRIADGSLDVQLKDDGNDELAALMRALNTMTRNLAETHVRLETALEEAREESRKAGTARSEAEESKAQVERSYGELLA
TAGVLEETVTAATDAMNAVQNNMQSLRKNSAAQQGQMAEIEQTAESLSRASRLIGSLSEETMTQGEAEKAAAAKGVDRVT
ASVESIRAIQTQAGLLSEEMAALEDHAGSITKVLHVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM
TATQEVGQIISGIQQSARTNAQSMLTMAESVSSAARQAEDSGHDLKQIAAGVETAFVRSESIFRAAESQNREVENVTQAL
AAMDGVIGESDLSVQSTDSAVGNLLAEMNKLQTVIADLHRHTRKR
>Mature_605_residues
MIRRVTISSRIWFLCALLFLVPSVILFMYWNSASKLADISKTEFRNAIEQGERHKIEIATSVLAESLAVALQDVTDPARQ
AVVVQNALDKIRFEQDSSGYFYAYRGTVCVAHATSPALINKDLSGLKAADGTYIIRSLFRLAQNGGGVMAFPWEKPGEGM
QDKIGTARFIPGTDIWIGTGVYLSNIAKAETALQQTLTRSIRPLLVTTIGALAAAGLLGILPLCFIITRSILTPLREAVQ
GAGRIADGSLDVQLKDDGNDELAALMRALNTMTRNLAETHVRLETALEEAREESRKAGTARSEAEESKAQVERSYGELLA
TAGVLEETVTAATDAMNAVQNNMQSLRKNSAAQQGQMAEIEQTAESLSRASRLIGSLSEETMTQGEAEKAAAAKGVDRVT
ASVESIRAIQTQAGLLSEEMAALEDHAGSITKVLHVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM
TATQEVGQIISGIQQSARTNAQSMLTMAESVSSAARQAEDSGHDLKQIAAGVETAFVRSESIFRAAESQNREVENVTQAL
AAMDGVIGESDLSVQSTDSAVGNLLAEMNKLQTVIADLHRHTRKR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=408, Percent_Identity=27.9411764705882, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1788195, Length=345, Percent_Identity=28.1159420289855, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI2367378, Length=353, Percent_Identity=28.8951841359773, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788194, Length=215, Percent_Identity=33.0232558139535, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789453, Length=208, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 64830; Mature: 64830

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRVTISSRIWFLCALLFLVPSVILFMYWNSASKLADISKTEFRNAIEQGERHKIEIAT
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SVLAESLAVALQDVTDPARQAVVVQNALDKIRFEQDSSGYFYAYRGTVCVAHATSPALIN
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEECCCCHHHH
KDLSGLKAADGTYIIRSLFRLAQNGGGVMAFPWEKPGEGMQDKIGTARFIPGTDIWIGTG
CCHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHCCCCEECCCCCEEEECC
VYLSNIAKAETALQQTLTRSIRPLLVTTIGALAAAGLLGILPLCFIITRSILTPLREAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGRIADGSLDVQLKDDGNDELAALMRALNTMTRNLAETHVRLETALEEAREESRKAGTA
HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RSEAEESKAQVERSYGELLATAGVLEETVTAATDAMNAVQNNMQSLRKNSAAQQGQMAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EQTAESLSRASRLIGSLSEETMTQGEAEKAAAAKGVDRVTASVESIRAIQTQAGLLSEEM
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALEDHAGSITKVLHVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM
HHHHHHCCHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
TATQEVGQIISGIQQSARTNAQSMLTMAESVSSAARQAEDSGHDLKQIAAGVETAFVRSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SIFRAAESQNREVENVTQALAAMDGVIGESDLSVQSTDSAVGNLLAEMNKLQTVIADLHR
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HTRKR
HHCCC
>Mature Secondary Structure
MIRRVTISSRIWFLCALLFLVPSVILFMYWNSASKLADISKTEFRNAIEQGERHKIEIAT
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SVLAESLAVALQDVTDPARQAVVVQNALDKIRFEQDSSGYFYAYRGTVCVAHATSPALIN
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEECCCCHHHH
KDLSGLKAADGTYIIRSLFRLAQNGGGVMAFPWEKPGEGMQDKIGTARFIPGTDIWIGTG
CCHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHCCCCEECCCCCEEEECC
VYLSNIAKAETALQQTLTRSIRPLLVTTIGALAAAGLLGILPLCFIITRSILTPLREAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGRIADGSLDVQLKDDGNDELAALMRALNTMTRNLAETHVRLETALEEAREESRKAGTA
HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RSEAEESKAQVERSYGELLATAGVLEETVTAATDAMNAVQNNMQSLRKNSAAQQGQMAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EQTAESLSRASRLIGSLSEETMTQGEAEKAAAAKGVDRVTASVESIRAIQTQAGLLSEEM
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALEDHAGSITKVLHVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM
HHHHHHCCHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
TATQEVGQIISGIQQSARTNAQSMLTMAESVSSAARQAEDSGHDLKQIAAGVETAFVRSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SIFRAAESQNREVENVTQALAAMDGVIGESDLSVQSTDSAVGNLLAEMNKLQTVIADLHR
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HTRKR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]