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The map label for this gene is yqaE [C]

Identifier: 78356796

GI number: 78356796

Start: 1810952

End: 1811110

Strand: Reverse

Name: yqaE [C]

Synonym: Dde_1753

Alternate gene names: 78356796

Gene position: 1811110-1810952 (Counterclockwise)

Preceding gene: 78356797

Following gene: 78356793

Centisome position: 48.55

GC content: 54.72

Gene sequence:

>159_bases
ATGGATTTCTTGCGTATTCTGGTCGCCATCCTGCTTCCCCCGCTGGGCGTATTTCTGCAGGTGGGGCTGGGCGGGGCTTT
CTGGCTGAATATCCTGCTGACCATCCTCGGTTACATTCCCGGCATTGTTCATGCCGTATGGGTTATTGCCAGACGATAA

Upstream 100 bases:

>100_bases
GGCGTTTACTTTTTTTAATACCGCATGATAAGCTATCCATGTAGGCAGCAGTCGCTGACGGAGCGGCACCGGCTCTTTTT
ATAAGCAAACAGGAGTTAAC

Downstream 100 bases:

>100_bases
TCAGGCGGCGGAACACTTGATGTTCCGCCGCCTGCCGTTATAACCCGCCGGATTCCGGCGGGGATGTCATTTAATAAATG
TAACCCTTGCCGTTGTTCGC

Product: Pmp3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MDFLRILVAILLPPLGVFLQVGLGGAFWLNILLTILGYIPGIVHAVWVIARR

Sequences:

>Translated_52_residues
MDFLRILVAILLPPLGVFLQVGLGGAFWLNILLTILGYIPGIVHAVWVIARR
>Mature_52_residues
MDFLRILVAILLPPLGVFLQVGLGGAFWLNILLTILGYIPGIVHAVWVIARR

Specific function: Unknown

COG id: COG0401

COG function: function code S; Uncharacterized homolog of Blt101

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0057 (PMP3) family [H]

Homologues:

Organism=Escherichia coli, GI1789020, Length=51, Percent_Identity=62.7450980392157, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000612 [H]

Pfam domain/function: PF01679 UPF0057 [H]

EC number: NA

Molecular weight: Translated: 5740; Mature: 5740

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS01309 UPF0057

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLRILVAILLPPLGVFLQVGLGGAFWLNILLTILGYIPGIVHAVWVIARR
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFLRILVAILLPPLGVFLQVGLGGAFWLNILLTILGYIPGIVHAVWVIARR
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]