| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356790
Identifier: 78356790
GI number: 78356790
Start: 1803224
End: 1803997
Strand: Reverse
Name: 78356790
Synonym: Dde_1747
Alternate gene names: NA
Gene position: 1803997-1803224 (Counterclockwise)
Preceding gene: 78356791
Following gene: 78356789
Centisome position: 48.36
GC content: 45.48
Gene sequence:
>774_bases ATGAGTTACCCCAAGTCTATTGCGGAGTTTTTCGAGCACCTTGCTCTTCCCCGCTCCAGCGAGGTTGGAAAACGGATTTT CAAAAAGCTGTTTTACGAGAACGGCCAGTTGAATGCGACGGATAAGAAGGCGTTTCAGGAAGATATTGATTTTATAGAAA TCAGAAACAGCCTTTCCCCTTCGAGTTCGAACATTCAAGCCTACCGGGATGACGAAAACGAATATGAGGAGATTCAAATT CTCCATGTAGCACTTTCGTCTGGCAAGCGTGTCTCGCGCATAGCAGATGTCATACAGAAGGCAATACCCTATCCTGTAGT TATAGTGGCGTCGTGCAATGATGATATTTGCATCAATGCCGCGTTCAAAAGAATTAATAAGGCAGATCAATCAAAGCTGG TCATTGAAGAAGCGCACGAAACAGGCTGGTTTTCCTTAGCCTCACCAGAAGAGTGGCAGCAAGACTTCCTCAAACAGCTT CATGCAGCGACCTTCTCCTTCCAGAATCTGTACGATTTTTACACGGATGCGGTAAATCGCATCATTGCCTTCAAGTGCGC CTCACACACAGGTGAATATACCCTGTTGGCACAGGAAGGCACCAAAGCCCCTGATCGAGCCTCTTCGTTGCAAAGGCTTG AGGAGCTTGAAAAGGAGCTGGCAGGTGTGCGCAATCAGCTGAAAAAAGAAAAGAATATGGGCACTCAGGTTCAGTTGAAC ACGCGGTGCAATGAAATTAAGAATAAAATTAAAGTAATTACTTCACAGCTTTAG
Upstream 100 bases:
>100_bases TTGAAAGCTTGTTCAGCAGGGGCGGAACGAACTTCTCCAAACAGAGCTTCAAAGGCATGGAAGACTTCGAAGTGGTCAGC TACATGATCGTGGAGGCCAA
Downstream 100 bases:
>100_bases AGGGTACTCGAATGCAGAAAATGACGCCAAGTGATGGACAAAGCATGAACGTTGTCGATGAAAATATCGAGGTATTGAAA AAAGCATTCCCTGAAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSYPKSIAEFFEHLALPRSSEVGKRIFKKLFYENGQLNATDKKAFQEDIDFIEIRNSLSPSSSNIQAYRDDENEYEEIQI LHVALSSGKRVSRIADVIQKAIPYPVVIVASCNDDICINAAFKRINKADQSKLVIEEAHETGWFSLASPEEWQQDFLKQL HAATFSFQNLYDFYTDAVNRIIAFKCASHTGEYTLLAQEGTKAPDRASSLQRLEELEKELAGVRNQLKKEKNMGTQVQLN TRCNEIKNKIKVITSQL
Sequences:
>Translated_257_residues MSYPKSIAEFFEHLALPRSSEVGKRIFKKLFYENGQLNATDKKAFQEDIDFIEIRNSLSPSSSNIQAYRDDENEYEEIQI LHVALSSGKRVSRIADVIQKAIPYPVVIVASCNDDICINAAFKRINKADQSKLVIEEAHETGWFSLASPEEWQQDFLKQL HAATFSFQNLYDFYTDAVNRIIAFKCASHTGEYTLLAQEGTKAPDRASSLQRLEELEKELAGVRNQLKKEKNMGTQVQLN TRCNEIKNKIKVITSQL >Mature_256_residues SYPKSIAEFFEHLALPRSSEVGKRIFKKLFYENGQLNATDKKAFQEDIDFIEIRNSLSPSSSNIQAYRDDENEYEEIQIL HVALSSGKRVSRIADVIQKAIPYPVVIVASCNDDICINAAFKRINKADQSKLVIEEAHETGWFSLASPEEWQQDFLKQLH AATFSFQNLYDFYTDAVNRIIAFKCASHTGEYTLLAQEGTKAPDRASSLQRLEELEKELAGVRNQLKKEKNMGTQVQLNT RCNEIKNKIKVITSQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29316; Mature: 29185
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPKSIAEFFEHLALPRSSEVGKRIFKKLFYENGQLNATDKKAFQEDIDFIEIRNSLSP CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC SSSNIQAYRDDENEYEEIQILHVALSSGKRVSRIADVIQKAIPYPVVIVASCNDDICINA CCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEHHH AFKRINKADQSKLVIEEAHETGWFSLASPEEWQQDFLKQLHAATFSFQNLYDFYTDAVNR HHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAFKCASHTGEYTLLAQEGTKAPDRASSLQRLEELEKELAGVRNQLKKEKNMGTQVQLN HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH TRCNEIKNKIKVITSQL HHHHHHHHHHHHHHHCC >Mature Secondary Structure SYPKSIAEFFEHLALPRSSEVGKRIFKKLFYENGQLNATDKKAFQEDIDFIEIRNSLSP CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC SSSNIQAYRDDENEYEEIQILHVALSSGKRVSRIADVIQKAIPYPVVIVASCNDDICINA CCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEHHH AFKRINKADQSKLVIEEAHETGWFSLASPEEWQQDFLKQLHAATFSFQNLYDFYTDAVNR HHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAFKCASHTGEYTLLAQEGTKAPDRASSLQRLEELEKELAGVRNQLKKEKNMGTQVQLN HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH TRCNEIKNKIKVITSQL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA