| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356784
Identifier: 78356784
GI number: 78356784
Start: 1796359
End: 1796913
Strand: Reverse
Name: 78356784
Synonym: Dde_1741
Alternate gene names: NA
Gene position: 1796913-1796359 (Counterclockwise)
Preceding gene: 78356785
Following gene: 78356782
Centisome position: 48.17
GC content: 51.71
Gene sequence:
>555_bases ATGGGTGAAATCAGCACACTCACCCTCAACGGCATGGCTGATGCCCGAACCATCGTGGATGAAAACGGTGAACTCTGGTT CGTCGCAATGGATGTTTGCAAGCACCTAGGTCTCAAGCCGAGGGATTCAGTGCGCTACTTGGACGACGACATGAAAAAGC ATCTTCCAAGAACCGCCCTCGGAATGAAGCCCGGAAAGCCGCTGCTGATTATCAACGAACCCGGTCTGTACACGCTCATA TTCCAAAGCCGAAAGCCTGAAGCCATGGCGTTTCAGGATTGGGTTTGCGAGGAAGTCCTGCCTTCGATCCGGAAGCATGG TGCGTACTTCATGATGAAGCCTACGGATACGGATGAGAGCATAATCCAGAAGGCAATGCAGATCATTGAACTGGCGCGTG AAGATGACGGCATTGAATGCCCCGACATCTTGCGAGAGTTGGCAGACAAGCTTGAAGCCGCCCTACAAGGTCAATTCATG CCGACATTCATGGCCAGCACTTGCAAGGCTTATTCGAATGACACCAGCGACTTAGGCCCAATTATTGACGTCTAA
Upstream 100 bases:
>100_bases GCGCAAACTGCTGGGGTTAAATCTCAATAAAAATCAGAATGTTATCATTTAGGTTGCACTAACAACCGGAACAACCCCCA AACTCAAGGCGGACATAATC
Downstream 100 bases:
>100_bases CCCAAAGGAAAAAGCTATGACACGCAGTCAATTATGCATCAAAGCTAAGTGTTTTAAAAACGGACTATCACCGCTGCATG ATGCCCTAAGGCAAACGGCG
Product: prophage antirepressor-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGEISTLTLNGMADARTIVDENGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPGKPLLIINEPGLYTLI FQSRKPEAMAFQDWVCEEVLPSIRKHGAYFMMKPTDTDESIIQKAMQIIELAREDDGIECPDILRELADKLEAALQGQFM PTFMASTCKAYSNDTSDLGPIIDV
Sequences:
>Translated_184_residues MGEISTLTLNGMADARTIVDENGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPGKPLLIINEPGLYTLI FQSRKPEAMAFQDWVCEEVLPSIRKHGAYFMMKPTDTDESIIQKAMQIIELAREDDGIECPDILRELADKLEAALQGQFM PTFMASTCKAYSNDTSDLGPIIDV >Mature_183_residues GEISTLTLNGMADARTIVDENGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPGKPLLIINEPGLYTLIF QSRKPEAMAFQDWVCEEVLPSIRKHGAYFMMKPTDTDESIIQKAMQIIELAREDDGIECPDILRELADKLEAALQGQFMP TFMASTCKAYSNDTSDLGPIIDV
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 20668; Mature: 20537
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEISTLTLNGMADARTIVDENGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTAL CCCCEEEEECCCCHHHHHCCCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHC GMKPGKPLLIINEPGLYTLIFQSRKPEAMAFQDWVCEEVLPSIRKHGAYFMMKPTDTDES CCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH IIQKAMQIIELAREDDGIECPDILRELADKLEAALQGQFMPTFMASTCKAYSNDTSDLGP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC IIDV CCCC >Mature Secondary Structure GEISTLTLNGMADARTIVDENGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTAL CCCEEEEECCCCHHHHHCCCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHC GMKPGKPLLIINEPGLYTLIFQSRKPEAMAFQDWVCEEVLPSIRKHGAYFMMKPTDTDES CCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH IIQKAMQIIELAREDDGIECPDILRELADKLEAALQGQFMPTFMASTCKAYSNDTSDLGP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC IIDV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]