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The map label for this gene is hspC2 [H]

Identifier: 78356781

GI number: 78356781

Start: 1794309

End: 1794878

Strand: Reverse

Name: hspC2 [H]

Synonym: Dde_1738

Alternate gene names: 78356781

Gene position: 1794878-1794309 (Counterclockwise)

Preceding gene: 78356782

Following gene: 78356780

Centisome position: 48.12

GC content: 49.82

Gene sequence:

>570_bases
ATGATGGTTTCTAAGCTGAATCCATGGAACTGGTTTAAGAAGGAAAGCGAACAGGAAAAGACCCTTCCGGTTAAGCAGAC
GGAACGGGGAGCAAGGGAATACGCTTCTCCGCTTGACCACTTCCACGCAGAATTCGACCGTATGGTTGATTCGATGTTCT
CTGGCTTTGGAATGCCTTCGCCTCGCCGCTTGTTCGACGCCGCCAGCCCGATGCTTGGCAAGTCTGTCATCAAGCCGAAA
GTCGATATTTACGGCACTGACAAAGAGTATGTTGTTGAAGTGGATCTTCCCGGCATCGAAGAGAAAGACCTGTCTGTTGA
ACTGAAAGACGACGTGCTGATTCTCTCTGCGGAAAAGAAGCATGAAGAGAAAACAGAAGAAAAGGGCTACTACCGCGTTG
AACGCTCTTACGGTTCCTTCCGCCGGGTGCTCAATGTCCCTGATGATGCGGACAAGGAAGGCATAAACGCCAAGTTGAAC
AAGGGCGTGTTGCGAATCACCATGCCGCGAAACAAGGCCATTGAAACAGAATCCCGCAAGATTGCGATTGAAAGTTCGAA
AGAGGACTAA

Upstream 100 bases:

>100_bases
AGAATGTTGCGCAATTTTAGCGACTCTATCTTGACACGTCGTTCTTTAGATTTATTCATGCTGTGCTGACCATAATTTTA
AACTCTTCAAGGAGGACGCT

Downstream 100 bases:

>100_bases
CCTGACAAGGGCATCTTAAAGAAACAAGAGCATTTTTGATTCCATAGTCACTTAGACGATACAACCCCGAAGGCTGGTGA
GGACGATGATCCTCGCCAGC

Product: small HspC2 heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MMVSKLNPWNWFKKESEQEKTLPVKQTERGAREYASPLDHFHAEFDRMVDSMFSGFGMPSPRRLFDAASPMLGKSVIKPK
VDIYGTDKEYVVEVDLPGIEEKDLSVELKDDVLILSAEKKHEEKTEEKGYYRVERSYGSFRRVLNVPDDADKEGINAKLN
KGVLRITMPRNKAIETESRKIAIESSKED

Sequences:

>Translated_189_residues
MMVSKLNPWNWFKKESEQEKTLPVKQTERGAREYASPLDHFHAEFDRMVDSMFSGFGMPSPRRLFDAASPMLGKSVIKPK
VDIYGTDKEYVVEVDLPGIEEKDLSVELKDDVLILSAEKKHEEKTEEKGYYRVERSYGSFRRVLNVPDDADKEGINAKLN
KGVLRITMPRNKAIETESRKIAIESSKED
>Mature_189_residues
MMVSKLNPWNWFKKESEQEKTLPVKQTERGAREYASPLDHFHAEFDRMVDSMFSGFGMPSPRRLFDAASPMLGKSVIKPK
VDIYGTDKEYVVEVDLPGIEEKDLSVELKDDVLILSAEKKHEEKTEEKGYYRVERSYGSFRRVLNVPDDADKEGINAKLN
KGVLRITMPRNKAIETESRKIAIESSKED

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 21731; Mature: 21731

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVSKLNPWNWFKKESEQEKTLPVKQTERGAREYASPLDHFHAEFDRMVDSMFSGFGMPS
CCCCCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRRLFDAASPMLGKSVIKPKVDIYGTDKEYVVEVDLPGIEEKDLSVELKDDVLILSAEKK
HHHHHHHCCCHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCEEEECCCEEEEECCHH
HEEKTEEKGYYRVERSYGSFRRVLNVPDDADKEGINAKLNKGVLRITMPRNKAIETESRK
HHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCE
IAIESSKED
EEECCCCCC
>Mature Secondary Structure
MMVSKLNPWNWFKKESEQEKTLPVKQTERGAREYASPLDHFHAEFDRMVDSMFSGFGMPS
CCCCCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRRLFDAASPMLGKSVIKPKVDIYGTDKEYVVEVDLPGIEEKDLSVELKDDVLILSAEKK
HHHHHHHCCCHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCEEEECCCEEEEECCHH
HEEKTEEKGYYRVERSYGSFRRVLNVPDDADKEGINAKLNKGVLRITMPRNKAIETESRK
HHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCE
IAIESSKED
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA