| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356757
Identifier: 78356757
GI number: 78356757
Start: 1771992
End: 1773413
Strand: Reverse
Name: 78356757
Synonym: Dde_1714
Alternate gene names: NA
Gene position: 1773413-1771992 (Counterclockwise)
Preceding gene: 78356758
Following gene: 78356756
Centisome position: 47.54
GC content: 57.88
Gene sequence:
>1422_bases ATGAAAAATCCTCCCGTGCTGGTTATCCAGATGCAGCGGCTGGGCGATCTTGTGCTCAGTTTTCCTTTGCTGGGCTGGCT GAAAATGCGTTATCCGGACACCCCGATCTGGGTTGTGGCCGAGCCTGTTTTTTTCAAAGGTCTGATGACACTGTCTCCGG AAGTAACGTACTTCCCTCCGGAAGCCGCCCCTGCACTGGCAAAAGAGTCTTATACGGCCGTTATCAACCTGAGCCACCGG CCCGAAGCGGCAAAACTGGCCGGCGCGGCACGGACTGAAGAGCTTTACGGCCTGTACCAGTCGAACGGCGCCACACGCAT AAAGGGGGACTGGCATCTGTACCGTGCCGGTCTGACTCACAACAACAGGCATAATGCATTCCACTGGGCCGACCTTAATG CACTTGACTGCATCGGGACATCCATGCTGCAAAAAACAGCCTGGCCCCCCATGCGGTACGCCAGCGGCTCGGAAGGCCGC ATAGGCCTTTTTCTTGGCGCCAGCGAACAAGATAAACATCCCGATGCTGTTTTCTGGGCGGCCTTTGCGGAAAAACTGCT CGCAGCAGGATTCAAGCCTGTACTCCTAGGCGGAAAAGCAGAAATGCCGCTGGCGGCACGCACGGCAGCCATCCTTAAAG CCCCCGCCCTGAACATGGCCGGCCGTTTTTCGCTGCCTGAATTTGTGGAAGTTCTGCGCTCGCTGCGGCTTCTTGTCACA CCGGACACCGGTCCCATGCATGTGGCGGCATGGACAGGCACACCCACGCTCAACCTTTCTCTGGGACCTGTCTCTGCCTG GGAAACCGCCCCCTTTCCTCCGGGGCATTTTGTTCTGCAAAGCACTCTCAGCTGTGTAGGCTGCTGGCGCTGTAAACACC CCCGCCCCTACTGTCACGACCAGTTCAGTCCGGCACGCATTGCATCGCTGGTACGCATGATTCTGAGCCGCACCCCAACC GCTCTTTCCACCCTGCATCTGCCGGGCCAGCGTCTTCTGCAAAGCTCACGCAGTACCGCGGGGCTTTTCCGGCTTGTTCC TCTTGATATTTCGGGAAAAAAACTGCAACCGGCATATGGCAGGGACTTTCTGCGCCGGTTCTGGCAGGCTTATTTTTTTC ATACCCTTGCTGACGGCAAAAGCGAAAGTCTGCATACCGCCTTCAGCGCACTGGCAACCGCCATGCCGGCAATTGCAGAG CGGCTGCCCGCCGCATCCCTGCAACTCAGCCGTATCCTTTCACTGGGGCTGCGCAAAGGGCATCATGCCTTGGGCGACAG TTTCTGGCTGCAGTTTCCTCCTTTTCTGCGTCCGCTCACAGGCTATCTGCAGCAAGCTCTTAGTAATGAAGACTACAGCC GCCCGGCCTACGCGCATGCTCTCAAGCTGGTGGAAACCCTCTTCGCGGCATTGCCGCGATAG
Upstream 100 bases:
>100_bases AAGTGGTCGCAGCAGCCCGCAGCCGCATACTTGCCGCCCACACATACGAACACAGGCTCCGGCAGCTGATGAACGACATG CGGACAGCATTCGGCAGGCC
Downstream 100 bases:
>100_bases GAAACTTCTTCCGCGGGATGTCTTGCCATAAAACGCAATACGCCGTTTTATATAAATAAAAAAATCTGGAACGCCTTTTG TATTCTATGCTGCCAAAGGA
Product: heptosyltransferase family protein
Products: NA
Alternate protein names: Lipopolysaccharide Heptosyltransferase II; ADP-HeptoseLPS Heptosyltransferase; Glycosyltransferase; Lipopolysaccharide Heptosyltransferase I; Lipopolysaccharide Biosynthesis Protein; ADP-Heptose-LPS Heptosyltransferase II; LPS Core Biosynthesis Protein
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MKNPPVLVIQMQRLGDLVLSFPLLGWLKMRYPDTPIWVVAEPVFFKGLMTLSPEVTYFPPEAAPALAKESYTAVINLSHR PEAAKLAGAARTEELYGLYQSNGATRIKGDWHLYRAGLTHNNRHNAFHWADLNALDCIGTSMLQKTAWPPMRYASGSEGR IGLFLGASEQDKHPDAVFWAAFAEKLLAAGFKPVLLGGKAEMPLAARTAAILKAPALNMAGRFSLPEFVEVLRSLRLLVT PDTGPMHVAAWTGTPTLNLSLGPVSAWETAPFPPGHFVLQSTLSCVGCWRCKHPRPYCHDQFSPARIASLVRMILSRTPT ALSTLHLPGQRLLQSSRSTAGLFRLVPLDISGKKLQPAYGRDFLRRFWQAYFFHTLADGKSESLHTAFSALATAMPAIAE RLPAASLQLSRILSLGLRKGHHALGDSFWLQFPPFLRPLTGYLQQALSNEDYSRPAYAHALKLVETLFAALPR
Sequences:
>Translated_473_residues MKNPPVLVIQMQRLGDLVLSFPLLGWLKMRYPDTPIWVVAEPVFFKGLMTLSPEVTYFPPEAAPALAKESYTAVINLSHR PEAAKLAGAARTEELYGLYQSNGATRIKGDWHLYRAGLTHNNRHNAFHWADLNALDCIGTSMLQKTAWPPMRYASGSEGR IGLFLGASEQDKHPDAVFWAAFAEKLLAAGFKPVLLGGKAEMPLAARTAAILKAPALNMAGRFSLPEFVEVLRSLRLLVT PDTGPMHVAAWTGTPTLNLSLGPVSAWETAPFPPGHFVLQSTLSCVGCWRCKHPRPYCHDQFSPARIASLVRMILSRTPT ALSTLHLPGQRLLQSSRSTAGLFRLVPLDISGKKLQPAYGRDFLRRFWQAYFFHTLADGKSESLHTAFSALATAMPAIAE RLPAASLQLSRILSLGLRKGHHALGDSFWLQFPPFLRPLTGYLQQALSNEDYSRPAYAHALKLVETLFAALPR >Mature_473_residues MKNPPVLVIQMQRLGDLVLSFPLLGWLKMRYPDTPIWVVAEPVFFKGLMTLSPEVTYFPPEAAPALAKESYTAVINLSHR PEAAKLAGAARTEELYGLYQSNGATRIKGDWHLYRAGLTHNNRHNAFHWADLNALDCIGTSMLQKTAWPPMRYASGSEGR IGLFLGASEQDKHPDAVFWAAFAEKLLAAGFKPVLLGGKAEMPLAARTAAILKAPALNMAGRFSLPEFVEVLRSLRLLVT PDTGPMHVAAWTGTPTLNLSLGPVSAWETAPFPPGHFVLQSTLSCVGCWRCKHPRPYCHDQFSPARIASLVRMILSRTPT ALSTLHLPGQRLLQSSRSTAGLFRLVPLDISGKKLQPAYGRDFLRRFWQAYFFHTLADGKSESLHTAFSALATAMPAIAE RLPAASLQLSRILSLGLRKGHHALGDSFWLQFPPFLRPLTGYLQQALSNEDYSRPAYAHALKLVETLFAALPR
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52178; Mature: 52178
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPPVLVIQMQRLGDLVLSFPLLGWLKMRYPDTPIWVVAEPVFFKGLMTLSPEVTYFPP CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCEEEECC EAAPALAKESYTAVINLSHRPEAAKLAGAARTEELYGLYQSNGATRIKGDWHLYRAGLTH CCCHHHHHCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCEEEECCEEEEEECCCC NNRHNAFHWADLNALDCIGTSMLQKTAWPPMRYASGSEGRIGLFLGASEQDKHPDAVFWA CCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH AFAEKLLAAGFKPVLLGGKAEMPLAARTAAILKAPALNMAGRFSLPEFVEVLRSLRLLVT HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCEEEEC PDTGPMHVAAWTGTPTLNLSLGPVSAWETAPFPPGHFVLQSTLSCVGCWRCKHPRPYCHD CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC QFSPARIASLVRMILSRTPTALSTLHLPGQRLLQSSRSTAGLFRLVPLDISGKKLQPAYG CCCHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC RDFLRRFWQAYFFHTLADGKSESLHTAFSALATAMPAIAERLPAASLQLSRILSLGLRKG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC HHALGDSFWLQFPPFLRPLTGYLQQALSNEDYSRPAYAHALKLVETLFAALPR CHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNPPVLVIQMQRLGDLVLSFPLLGWLKMRYPDTPIWVVAEPVFFKGLMTLSPEVTYFPP CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCEEEECC EAAPALAKESYTAVINLSHRPEAAKLAGAARTEELYGLYQSNGATRIKGDWHLYRAGLTH CCCHHHHHCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCEEEECCEEEEEECCCC NNRHNAFHWADLNALDCIGTSMLQKTAWPPMRYASGSEGRIGLFLGASEQDKHPDAVFWA CCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH AFAEKLLAAGFKPVLLGGKAEMPLAARTAAILKAPALNMAGRFSLPEFVEVLRSLRLLVT HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCEEEEC PDTGPMHVAAWTGTPTLNLSLGPVSAWETAPFPPGHFVLQSTLSCVGCWRCKHPRPYCHD CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC QFSPARIASLVRMILSRTPTALSTLHLPGQRLLQSSRSTAGLFRLVPLDISGKKLQPAYG CCCHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC RDFLRRFWQAYFFHTLADGKSESLHTAFSALATAMPAIAERLPAASLQLSRILSLGLRKG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC HHALGDSFWLQFPPFLRPLTGYLQQALSNEDYSRPAYAHALKLVETLFAALPR CHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA