| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pqqL [C]
Identifier: 78356742
GI number: 78356742
Start: 1753926
End: 1756544
Strand: Reverse
Name: pqqL [C]
Synonym: Dde_1699
Alternate gene names: 78356742
Gene position: 1756544-1753926 (Counterclockwise)
Preceding gene: 78356744
Following gene: 78356741
Centisome position: 47.09
GC content: 56.47
Gene sequence:
>2619_bases ATGAAAAAACAGCGAATTCTAGCCTTTTTTATCGGAGCAGCCTTAATGTTTTTTTCTTTTCAAGCCGCTCATGCCGCCAG TGTAACCAGACTGGCCAACGGTCTGACTGTACTGATTCAGCAGGATGACCGTTTTCCGCTTGCCTCGCTCAGGCTGTATG TCCATGCGGGTTCAGCCTATGAAACACCGCAGCAGGCAGGCATAAGCCACCTGCTTGAGCACATGGTGTTCAAAGGGACG GAAAAACGCCCCGAAGGCGGGGTTGCCGGAGCCATCGAGCAGATAGGCGGCAACATCAATGCCGCAACAAGCTTTGACTA TACGGTATATCTTACAGATGTACCCTCCGAACACTGGCGTCTGGGCATGGACGTACTCAAGGATATGACTTTCGGTGCAA AAATCAGCCCTGAAGCGCTGGCTCCGGAAAAAGAGGTTGTTCTTGCCGAACTGGAACGCGGAGAAGACACCCCCGGCAGT CTTCTCTTCAAACGTCTGACGGCAAAAGTGCTGGCCCGGACCCCGTATGAACGCCCCATCATCGGGTACCGCGAAACAGT GAGCGCGATAACCAGCAAAGACATTCACGACTATATCGACCGCCTGTACCAGCCGCAGTCCATGCTGCTGGTGGTATGCG GAGCCGTGAACGAACAGGAGGTGCTGGCAGAAGCTGAAAAGCTTTTCGGAAATCTTGCAAACACCCGGACTTGCGTGCCC CCGCAGCCGGTCACACCACCCGTTTCGCCCGCCGCCCCCGCACTGACTGCGGAGCCGGGCAAGTGGAACAAGGTCTACGC GGGATTCGCCCTGCCTATTCCCAACTTTCATGATGCCCGGATACCTGCCGTCGAAGTACTTGCCCAGATGCTGGGCGGAG ATAAAACCTCTCTGCTTTACAGAGAGTTCAAGTACGACAAGCAGCTTGTGGACGATATCTCAGTCTCTGCCTATTCCTTT GAGCGCACAGGACTTCTGCTGATTACGGCCATACTTGATCCGCAGAAAACAGAGAAATTCACCCGCGAGCTTTCGGCGGC ACTGGCGCGGCTGAGTGCGGACAGTTTCACAGACAACGCTCTGGCGCGGGCAAAGCTCAATCTGGAAGACGAACTGTTCC GGTCCAAGGAAACGCTGTCCGGTCTGGCTTCCAAGCTGGGACATTTTTATTTTTTTGAAAACGGCGAACAAAGTGAACTG AACTATCTGCAAAGCCTCCGTCAGGTGGAAAAAACATCAGTTCAGGACATTCTGGACACTTTTTTCACTCCCGAAAGGCT GAACGGAGTGCTGCTTACTCCGCAGAATGCCGGACTGAACAGCGATGACCTGACAGAGCTGTTCCGCGACGGCTGGCCCG CAAAGGGCAGCGGGCATGCCGCCCCCGCGGAAAAAGGTGACAACGGGCAGCAGCAGGAAGTGATTGAACTGGGCGACGGG CGCACTGTGGTGCTCATTCCCGACGAGACACTTCCTTATACGGCGGTCGATCTGGTGTTCCGCGGCGGTGATGCCCTGCT GGATGAAGACAGGCAGGGTCTTGCAGCCCTTGCAGCCAGAGTGCTGACCAAAGGCACCCAGCAGATGGACAATGCCGCTC TGGAGGCTTTCAAGGCAGACAGAGCAGCCAGTCTGGCCGCTTCTGCAGGCAGATCGTCTTTCACCATCAGCGCGCGCTAC CCGGAAAGATTCAGTGCCGACATCACCGGTCTGTTCCGCAACGTTGTCACCGCTCCGGCACTGGCTGCAGAAGAAACCGC GCGTGAAAAAGACAACCAGATTGCATCCATAAAGGCCCGTGAAGATCAGCCGCTCGGGCTTGCGTTCCGCAGATTGTTTC CGTTTCTTTTCCACAACAGTGCTTACGGATACCTGCATCTGGGTGAAGAGCAGCGTCTTGCCGCCTACACCGCGGAAGAT GTGGCCGGATTCTGGAAAGTGCAGCGGACACAACCATGGGTGCTTGCGGTATGCGGACAGTTCGACCGCGAAGAGATTCT CGGGCTGGCACGCAGCCTGCCCGCCCCCTCCGGGCCTGTCGCCGTGCCTGCGGTGCCGCTGTGGTCTGCTGAAACACAGC TGGATATCTCGCTGGAGGACAGAAATCAGGCGCATATGCTGATGATATTCAAAACCGTACCCATAACGCATGAAGACACC CCGGCGCTGGAGCTGCTGCAGACAGTTCTTGCCGGACAATCCGGCCTGCTTTTTACAGATCTGCGCGACAAACAGGGGCT TGGCTACACTGTGACGGCGTTCCCGTGGCAGTCGGAACATGCCGGTCTGCTGGCTTTTTATATTGGCACCGACCCTGAAA AACTTGCACAGGCCGACGCCGGTTTTAAAAAAGTAATCCGCGATCTGCAGGAGGCCCCCCTGCCTGAAGAAGCCATCCGC CGCGGTAAAAACATGCTGCGGGGCGACTACTACCGGGGCAGGCAGAGTCTTGGCAGCCGCAGCAACGAAGCCGCCCGCCT TGCCGGCTCGGGGCTGCCTCTTGATTTTGAAAAAGGACTTATCGAAAAAGCGGAAAAAGTGGATGCCACCGCCCTGCAGG AGGTGGCCCGCAGATATCTCATTCCGCAGGATGCGTATATCATCAGGGTACTGCCCTGA
Upstream 100 bases:
>100_bases CGACTTTCTTGCCTTGTCCCGCAGAAGGATTACCTGTAAAACTCTGCACCGTACGATGAGGAAACACCTTGCAGCGCCTT TGCGGACCAAGGAGACACAT
Downstream 100 bases:
>100_bases CATTCCGGGCCGGTTTGGCGCAAACCGGCCCGTTTTTTTCTTTGTCAATCATCACAAAAACGGCTAAGAAGCCGCCCGAA GGCTTCCGCGCCTTTCCATA
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 872; Mature: 872
Protein sequence:
>872_residues MKKQRILAFFIGAALMFFSFQAAHAASVTRLANGLTVLIQQDDRFPLASLRLYVHAGSAYETPQQAGISHLLEHMVFKGT EKRPEGGVAGAIEQIGGNINAATSFDYTVYLTDVPSEHWRLGMDVLKDMTFGAKISPEALAPEKEVVLAELERGEDTPGS LLFKRLTAKVLARTPYERPIIGYRETVSAITSKDIHDYIDRLYQPQSMLLVVCGAVNEQEVLAEAEKLFGNLANTRTCVP PQPVTPPVSPAAPALTAEPGKWNKVYAGFALPIPNFHDARIPAVEVLAQMLGGDKTSLLYREFKYDKQLVDDISVSAYSF ERTGLLLITAILDPQKTEKFTRELSAALARLSADSFTDNALARAKLNLEDELFRSKETLSGLASKLGHFYFFENGEQSEL NYLQSLRQVEKTSVQDILDTFFTPERLNGVLLTPQNAGLNSDDLTELFRDGWPAKGSGHAAPAEKGDNGQQQEVIELGDG RTVVLIPDETLPYTAVDLVFRGGDALLDEDRQGLAALAARVLTKGTQQMDNAALEAFKADRAASLAASAGRSSFTISARY PERFSADITGLFRNVVTAPALAAEETAREKDNQIASIKAREDQPLGLAFRRLFPFLFHNSAYGYLHLGEEQRLAAYTAED VAGFWKVQRTQPWVLAVCGQFDREEILGLARSLPAPSGPVAVPAVPLWSAETQLDISLEDRNQAHMLMIFKTVPITHEDT PALELLQTVLAGQSGLLFTDLRDKQGLGYTVTAFPWQSEHAGLLAFYIGTDPEKLAQADAGFKKVIRDLQEAPLPEEAIR RGKNMLRGDYYRGRQSLGSRSNEAARLAGSGLPLDFEKGLIEKAEKVDATALQEVARRYLIPQDAYIIRVLP
Sequences:
>Translated_872_residues MKKQRILAFFIGAALMFFSFQAAHAASVTRLANGLTVLIQQDDRFPLASLRLYVHAGSAYETPQQAGISHLLEHMVFKGT EKRPEGGVAGAIEQIGGNINAATSFDYTVYLTDVPSEHWRLGMDVLKDMTFGAKISPEALAPEKEVVLAELERGEDTPGS LLFKRLTAKVLARTPYERPIIGYRETVSAITSKDIHDYIDRLYQPQSMLLVVCGAVNEQEVLAEAEKLFGNLANTRTCVP PQPVTPPVSPAAPALTAEPGKWNKVYAGFALPIPNFHDARIPAVEVLAQMLGGDKTSLLYREFKYDKQLVDDISVSAYSF ERTGLLLITAILDPQKTEKFTRELSAALARLSADSFTDNALARAKLNLEDELFRSKETLSGLASKLGHFYFFENGEQSEL NYLQSLRQVEKTSVQDILDTFFTPERLNGVLLTPQNAGLNSDDLTELFRDGWPAKGSGHAAPAEKGDNGQQQEVIELGDG RTVVLIPDETLPYTAVDLVFRGGDALLDEDRQGLAALAARVLTKGTQQMDNAALEAFKADRAASLAASAGRSSFTISARY PERFSADITGLFRNVVTAPALAAEETAREKDNQIASIKAREDQPLGLAFRRLFPFLFHNSAYGYLHLGEEQRLAAYTAED VAGFWKVQRTQPWVLAVCGQFDREEILGLARSLPAPSGPVAVPAVPLWSAETQLDISLEDRNQAHMLMIFKTVPITHEDT PALELLQTVLAGQSGLLFTDLRDKQGLGYTVTAFPWQSEHAGLLAFYIGTDPEKLAQADAGFKKVIRDLQEAPLPEEAIR RGKNMLRGDYYRGRQSLGSRSNEAARLAGSGLPLDFEKGLIEKAEKVDATALQEVARRYLIPQDAYIIRVLP >Mature_872_residues MKKQRILAFFIGAALMFFSFQAAHAASVTRLANGLTVLIQQDDRFPLASLRLYVHAGSAYETPQQAGISHLLEHMVFKGT EKRPEGGVAGAIEQIGGNINAATSFDYTVYLTDVPSEHWRLGMDVLKDMTFGAKISPEALAPEKEVVLAELERGEDTPGS LLFKRLTAKVLARTPYERPIIGYRETVSAITSKDIHDYIDRLYQPQSMLLVVCGAVNEQEVLAEAEKLFGNLANTRTCVP PQPVTPPVSPAAPALTAEPGKWNKVYAGFALPIPNFHDARIPAVEVLAQMLGGDKTSLLYREFKYDKQLVDDISVSAYSF ERTGLLLITAILDPQKTEKFTRELSAALARLSADSFTDNALARAKLNLEDELFRSKETLSGLASKLGHFYFFENGEQSEL NYLQSLRQVEKTSVQDILDTFFTPERLNGVLLTPQNAGLNSDDLTELFRDGWPAKGSGHAAPAEKGDNGQQQEVIELGDG RTVVLIPDETLPYTAVDLVFRGGDALLDEDRQGLAALAARVLTKGTQQMDNAALEAFKADRAASLAASAGRSSFTISARY PERFSADITGLFRNVVTAPALAAEETAREKDNQIASIKAREDQPLGLAFRRLFPFLFHNSAYGYLHLGEEQRLAAYTAED VAGFWKVQRTQPWVLAVCGQFDREEILGLARSLPAPSGPVAVPAVPLWSAETQLDISLEDRNQAHMLMIFKTVPITHEDT PALELLQTVLAGQSGLLFTDLRDKQGLGYTVTAFPWQSEHAGLLAFYIGTDPEKLAQADAGFKKVIRDLQEAPLPEEAIR RGKNMLRGDYYRGRQSLGSRSNEAARLAGSGLPLDFEKGLIEKAEKVDATALQEVARRYLIPQDAYIIRVLP
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=217, Percent_Identity=31.7972350230415, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI46593007, Length=404, Percent_Identity=22.029702970297, Blast_Score=103, Evalue=1e-21, Organism=Homo sapiens, GI155969707, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1787770, Length=215, Percent_Identity=28.3720930232558, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71999683, Length=218, Percent_Identity=30.7339449541284, Blast_Score=115, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17553678, Length=371, Percent_Identity=25.0673854447439, Blast_Score=98, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323192, Length=212, Percent_Identity=31.1320754716981, Blast_Score=119, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6321813, Length=231, Percent_Identity=24.6753246753247, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357875, Length=222, Percent_Identity=31.0810810810811, Blast_Score=112, Evalue=2e-24, Organism=Drosophila melanogaster, GI24646943, Length=222, Percent_Identity=31.0810810810811, Blast_Score=112, Evalue=2e-24, Organism=Drosophila melanogaster, GI221513245, Length=227, Percent_Identity=27.7533039647577, Blast_Score=68, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 95831; Mature: 95831
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQRILAFFIGAALMFFSFQAAHAASVTRLANGLTVLIQQDDRFPLASLRLYVHAGSAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHEEEEEECCCCC ETPQQAGISHLLEHMVFKGTEKRPEGGVAGAIEQIGGNINAATSFDYTVYLTDVPSEHWR CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCHHHH LGMDVLKDMTFGAKISPEALAPEKEVVLAELERGEDTPGSLLFKRLTAKVLARTPYERPI HHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC IGYRETVSAITSKDIHDYIDRLYQPQSMLLVVCGAVNEQEVLAEAEKLFGNLANTRTCVP CCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC PQPVTPPVSPAAPALTAEPGKWNKVYAGFALPIPNFHDARIPAVEVLAQMLGGDKTSLLY CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHH REFKYDKQLVDDISVSAYSFERTGLLLITAILDPQKTEKFTRELSAALARLSADSFTDNA HHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCH LARAKLNLEDELFRSKETLSGLASKLGHFYFFENGEQSELNYLQSLRQVEKTSVQDILDT HHHEECCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH FFTPERLNGVLLTPQNAGLNSDDLTELFRDGWPAKGSGHAAPAEKGDNGQQQEVIELGDG HCCHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEECCC RTVVLIPDETLPYTAVDLVFRGGDALLDEDRQGLAALAARVLTKGTQQMDNAALEAFKAD CEEEEECCCCCCCCEEHEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAASLAASAGRSSFTISARYPERFSADITGLFRNVVTAPALAAEETAREKDNQIASIKAR HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECC EDQPLGLAFRRLFPFLFHNSAYGYLHLGEEQRLAAYTAEDVAGFWKVQRTQPWVLAVCGQ CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCCEEEEECCC FDREEILGLARSLPAPSGPVAVPAVPLWSAETQLDISLEDRNQAHMLMIFKTVPITHEDT CCHHHHHHHHHHCCCCCCCEECCCEECCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCC PALELLQTVLAGQSGLLFTDLRDKQGLGYTVTAFPWQSEHAGLLAFYIGTDPEKLAQADA HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHCC GFKKVIRDLQEAPLPEEAIRRGKNMLRGDYYRGRQSLGSRSNEAARLAGSGLPLDFEKGL CHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH IEKAEKVDATALQEVARRYLIPQDAYIIRVLP HHHHHHCCHHHHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MKKQRILAFFIGAALMFFSFQAAHAASVTRLANGLTVLIQQDDRFPLASLRLYVHAGSAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHEEEEEECCCCC ETPQQAGISHLLEHMVFKGTEKRPEGGVAGAIEQIGGNINAATSFDYTVYLTDVPSEHWR CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCHHHH LGMDVLKDMTFGAKISPEALAPEKEVVLAELERGEDTPGSLLFKRLTAKVLARTPYERPI HHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC IGYRETVSAITSKDIHDYIDRLYQPQSMLLVVCGAVNEQEVLAEAEKLFGNLANTRTCVP CCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC PQPVTPPVSPAAPALTAEPGKWNKVYAGFALPIPNFHDARIPAVEVLAQMLGGDKTSLLY CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHH REFKYDKQLVDDISVSAYSFERTGLLLITAILDPQKTEKFTRELSAALARLSADSFTDNA HHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCH LARAKLNLEDELFRSKETLSGLASKLGHFYFFENGEQSELNYLQSLRQVEKTSVQDILDT HHHEECCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH FFTPERLNGVLLTPQNAGLNSDDLTELFRDGWPAKGSGHAAPAEKGDNGQQQEVIELGDG HCCHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEECCC RTVVLIPDETLPYTAVDLVFRGGDALLDEDRQGLAALAARVLTKGTQQMDNAALEAFKAD CEEEEECCCCCCCCEEHEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAASLAASAGRSSFTISARYPERFSADITGLFRNVVTAPALAAEETAREKDNQIASIKAR HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECC EDQPLGLAFRRLFPFLFHNSAYGYLHLGEEQRLAAYTAEDVAGFWKVQRTQPWVLAVCGQ CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCCEEEEECCC FDREEILGLARSLPAPSGPVAVPAVPLWSAETQLDISLEDRNQAHMLMIFKTVPITHEDT CCHHHHHHHHHHCCCCCCCEECCCEECCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCC PALELLQTVLAGQSGLLFTDLRDKQGLGYTVTAFPWQSEHAGLLAFYIGTDPEKLAQADA HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHCC GFKKVIRDLQEAPLPEEAIRRGKNMLRGDYYRGRQSLGSRSNEAARLAGSGLPLDFEKGL CHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH IEKAEKVDATALQEVARRYLIPQDAYIIRVLP HHHHHHCCHHHHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]