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The map label for this gene is 78356713

Identifier: 78356713

GI number: 78356713

Start: 1723137

End: 1724156

Strand: Reverse

Name: 78356713

Synonym: Dde_1670

Alternate gene names: NA

Gene position: 1724156-1723137 (Counterclockwise)

Preceding gene: 78356714

Following gene: 78356712

Centisome position: 46.22

GC content: 55.39

Gene sequence:

>1020_bases
ATGCACAAGGCCATTCTGTGGAGACCCGGAAAAAACAACGCGGTGCAATGCACATTATGCTGTCACTACTGCCTTATTCC
CGCAGGAGGCAAAGGCGCCTGCGGAGTACGCCTCAATGACAGAGGCGTGCTGTATACTCTGGTGGCTGACAATGCAGCCG
CCCTGAATCTTGATCCGGTGGAAAAAAAACCGCTGTTCCACTTTCTTCCGGGTACGCAGACGCTGTCGCTGGGTACGGAG
GGGTGCAACATGGGGTGCGTATTCTGCCAGAATCACCATCTGTCGCAACCGGTCAGGGCAGGAAAAAAGCCTGCCGGCAC
ACCGGTTTCTCCTGACTCACTGGTCAAGTTCGCCCTGCATTCCGGCGCGCAGAGTATCTCTTATACATACACCGAACCCA
CGGTGTTTTCAGAGCTGGTCATATCAACTTCGGCCGCTGCAGCTGAGCATGGGCTAAAAAACATTCTGGTTTCAAACGGC
TATCAGAGCCCTGAAGCACTTTCCCGACTTGACGCGACGATACATGCAGCCAACTTTGACCTGAAATCTTTTTCTGACAA
CTTTTACCGCGCCCACTGCGGGGCCCGCCTGAAGCCCGTGCTCCGCACATTACGTGCCGCAAAAAAATATGGCTGGTGGG
TTGAAATAACAACACTGGTCATTGACGGAATGAACGACAGCATGGAGGAACTGCAGGCCATCGCAACATTCATTGCCGCA
GAACTGGGACAGGATGTACCGTGGCATGTTTCCCGTTTTCACCCGGCCTACCGTATGACCGGCTCAGCCCCCACAGTACC
GGCTGCCATTGAACGCGCTCTCGAAAGCGGTTACAAGGCGGGGCTGCGCTTTGTCTATGCCGGCAACATGCCCGGGCATG
CAGCAGAAAATACCTACTGCCCCGTCTGCGGCCAGCTGCTTATCAGCCGGGTCGGCTTTACGGCACATTTCAACACCGCC
GGTCGTTGTGCACGGTGTAACACCACTTTGCCCGGCATATGGACACGGGAGCAATTCTGA

Upstream 100 bases:

>100_bases
GCGCCCTGCACGGCCTGCGGCCAACTCGACAGTACCTGTTCTTATTATCACGCCGGAGATTACTCTTCCGGTGAACAAGC
CATAAGCAGACTTTATCACC

Downstream 100 bases:

>100_bases
TGCTGCTTATTCATACAGGAAATGGAAAAGGAAAAACAACCGCCAGCATAGGCATCGCCATACGGGCGCTTGGTCAGCAG
ATGCGTGTGGGTTTCGGCCA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MHKAILWRPGKNNAVQCTLCCHYCLIPAGGKGACGVRLNDRGVLYTLVADNAAALNLDPVEKKPLFHFLPGTQTLSLGTE
GCNMGCVFCQNHHLSQPVRAGKKPAGTPVSPDSLVKFALHSGAQSISYTYTEPTVFSELVISTSAAAAEHGLKNILVSNG
YQSPEALSRLDATIHAANFDLKSFSDNFYRAHCGARLKPVLRTLRAAKKYGWWVEITTLVIDGMNDSMEELQAIATFIAA
ELGQDVPWHVSRFHPAYRMTGSAPTVPAAIERALESGYKAGLRFVYAGNMPGHAAENTYCPVCGQLLISRVGFTAHFNTA
GRCARCNTTLPGIWTREQF

Sequences:

>Translated_339_residues
MHKAILWRPGKNNAVQCTLCCHYCLIPAGGKGACGVRLNDRGVLYTLVADNAAALNLDPVEKKPLFHFLPGTQTLSLGTE
GCNMGCVFCQNHHLSQPVRAGKKPAGTPVSPDSLVKFALHSGAQSISYTYTEPTVFSELVISTSAAAAEHGLKNILVSNG
YQSPEALSRLDATIHAANFDLKSFSDNFYRAHCGARLKPVLRTLRAAKKYGWWVEITTLVIDGMNDSMEELQAIATFIAA
ELGQDVPWHVSRFHPAYRMTGSAPTVPAAIERALESGYKAGLRFVYAGNMPGHAAENTYCPVCGQLLISRVGFTAHFNTA
GRCARCNTTLPGIWTREQF
>Mature_339_residues
MHKAILWRPGKNNAVQCTLCCHYCLIPAGGKGACGVRLNDRGVLYTLVADNAAALNLDPVEKKPLFHFLPGTQTLSLGTE
GCNMGCVFCQNHHLSQPVRAGKKPAGTPVSPDSLVKFALHSGAQSISYTYTEPTVFSELVISTSAAAAEHGLKNILVSNG
YQSPEALSRLDATIHAANFDLKSFSDNFYRAHCGARLKPVLRTLRAAKKYGWWVEITTLVIDGMNDSMEELQAIATFIAA
ELGQDVPWHVSRFHPAYRMTGSAPTVPAAIERALESGYKAGLRFVYAGNMPGHAAENTYCPVCGQLLISRVGFTAHFNTA
GRCARCNTTLPGIWTREQF

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36757; Mature: 36757

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKAILWRPGKNNAVQCTLCCHYCLIPAGGKGACGVRLNDRGVLYTLVADNAAALNLDPV
CCCCEEEECCCCCCEEEEEEEEEHEEECCCCCEEEEEECCCCEEEEEEECCCEEECCCCC
EKKPLFHFLPGTQTLSLGTEGCNMGCVFCQNHHLSQPVRAGKKPAGTPVSPDSLVKFALH
CCCCCEEECCCCEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHH
SGAQSISYTYTEPTVFSELVISTSAAAAEHGLKNILVSNGYQSPEALSRLDATIHAANFD
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCC
LKSFSDNFYRAHCGARLKPVLRTLRAAKKYGWWVEITTLVIDGMNDSMEELQAIATFIAA
HHHHCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHH
ELGQDVPWHVSRFHPAYRMTGSAPTVPAAIERALESGYKAGLRFVYAGNMPGHAAENTYC
HHCCCCCCHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCC
PVCGQLLISRVGFTAHFNTAGRCARCNTTLPGIWTREQF
HHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MHKAILWRPGKNNAVQCTLCCHYCLIPAGGKGACGVRLNDRGVLYTLVADNAAALNLDPV
CCCCEEEECCCCCCEEEEEEEEEHEEECCCCCEEEEEECCCCEEEEEEECCCEEECCCCC
EKKPLFHFLPGTQTLSLGTEGCNMGCVFCQNHHLSQPVRAGKKPAGTPVSPDSLVKFALH
CCCCCEEECCCCEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHH
SGAQSISYTYTEPTVFSELVISTSAAAAEHGLKNILVSNGYQSPEALSRLDATIHAANFD
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCC
LKSFSDNFYRAHCGARLKPVLRTLRAAKKYGWWVEITTLVIDGMNDSMEELQAIATFIAA
HHHHCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHH
ELGQDVPWHVSRFHPAYRMTGSAPTVPAAIERALESGYKAGLRFVYAGNMPGHAAENTYC
HHCCCCCCHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCC
PVCGQLLISRVGFTAHFNTAGRCARCNTTLPGIWTREQF
HHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]