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The map label for this gene is dcrA [H]

Identifier: 78356708

GI number: 78356708

Start: 1718654

End: 1720981

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_1665

Alternate gene names: 78356708

Gene position: 1720981-1718654 (Counterclockwise)

Preceding gene: 78356709

Following gene: 78356701

Centisome position: 46.14

GC content: 51.2

Gene sequence:

>2328_bases
ATGAATCTCAGAAGCATCAGCGCCCAGCTTTCGGCACTTATCACCGTCCTGATCGTTCTTACCATAGGCGCGCTGATATT
TTTTGCCACGGCCAGTTCATATGAAAGCACTATAGAAAATCAGGAAGCAAATATAAAAACACTTAACAACCAGATCGTCA
GCAGTACCGAGCATATCCTGGCGTCAAACATCGCATCGACACAGGCATTCGGCGAACGACGCTATGTTGTCAATGCTCTT
AGATACAACAACGCCCGCTCCATCCCCATAAAAGAATACCAAAATACCGTTGAAAGTCTGGACCTTATATCTTCGCTGCT
GGTCACTGACACCCAAGGCAATATTCTCGGCGGTGTGAATGAAAAAAATGAAACGGTAACCGACGGGCGGGAAGAAGATG
AAAAGCTGATCGAGGCGGTAGCTCAGGGCAAAAAATATATTGCCGGTTATGCCGTCAGATCGGAAAAAACAGGGGACGCT
CTTGTCAAACTTGCCGCTCCCATCATTGATCCCATTACCGAAAAAGTTCTCGGCGGAGTTATTGCCTGCCTGGACTGGTC
GCGCATCAGCGAAAATTTCATTTCTCACGTAACCATCGGCAAGGCCGGATACATCGTGGTTACCGACAACGCCGGAGTGG
TTATAACCCACCCGGATAAAACCGTGCAGTTCACTTCTCTTGCCGGTTTTGATTTCATGCAGCAGGCTCTGCAACACGAT
GAAACAGCTATTTTTTATTCATGGAAAGGAAAGAAGAAGGCGCTGATCAGCGCGACAATTCCCGCAACGGGCTTCAAGGT
ACTTTCAACAAGCTACGCAGACGATCTTGCAGCAGCGGCCGCTACACAAAGAAATATGCTTATGCTGACCGGCACCGTTG
CAGCTGTCACGCTTATCGCCGTTGTTCTTTTCTTTATGCAGCGCATGGTTATACGTCCGTTACGCTGCCTGCAGGACTAC
ACCAATTCGGTTGCATCGGGCAACCTGTCTGCAGTCATGACAGGAAGCCACAGATACGAAATGGCCGCACTGTCCACCGG
CCTTCAGAACATGGTGCAGGAACTGAAAGACAAGCTTGCTTTCAGCCGCAGTGTTCTGGAAGGTATAACCCTGCCCTTGC
TCATTGTGGACAAAGATGAAAAGGCGACATTCATCAACACACCGTGTCTGGAAATGCTCCAGATAGACAAAACTCCGGAA
CAATGTCTGGGCAGAACTCTTGCCGACCTGTTTTACAACGATCCCGGAAGAAAGACCGCTGTCGGGCGCAGCATGGCTGA
AAAACAGGTCATATCAAATCTTGAGGTTACCATAACCGGTCACAAAGGCAGACAGACCGAAGTGCTGGCCAATGTCACAT
ACCTGCAGGACATGGAAGGAACCATAACCGGCGGGATGTGCCTGTATCTTGATATGACGGAGTTTAAAAAACAGCAGAGA
CGTATTGCAGAACAAAATAAACGTATTGCAGAAACAGCGGAAAACGCGGGCAACATTGCGGAACAGCTGGCTTCCGCTTC
CGCGGAACTTTCTTCCCAGATAGAGCAGTCGTCGCGCGGGACTGACATTCAGCGGGAACGCACGGGCGAAACAGCCGCAG
CCATGGAGCAGATGAACGCGACGGTACTGGAAGTTGCGCGCAATGCCACCGCCACGGCTGGCCTTTCCGAGCAGACAAAG
CAGAAAGCCTTTGAAGGCGGCCGGGTCGCACAGCAGACAATTGAAAAAATTACACTGGCCCATGAACAGGCTCTGGCCCT
GAAGGCGGATATGGCAGAATTGGGACAACAGGCAGAAGGAATCGGCGCCATAATGAACGTCATAGCAGATATTGCCGACC
AGACAAATCTGCTGGCCCTTAACGCAGCCATTGAAGCTGCACGGGCAGGAGACGCGGGTCGCGGCTTTGCTGTGGTGGCC
GACGAAGTGCGCAAACTTGCTGAAAAAACCATGAGTGCAACGCAGGAAGTGGGCCAGAGCATCAAAAGAATACAGCAAAG
CACCCAGAAAAATATCCGCAACACGGAAAGCGCTGCAACTGCCATTTCTGCCGGAGCGGAAATGGTCACGCTTTCCGGAA
AAGCTCTCGAAGAAATCATGCAGCTGGTGCAGGAAAGCGCTGATCAGGTGAACAGCATCGCCACAGCAGCAGAAGAACAA
TCGGCCACCAGTGAGCAGATTAATCGTTCCACTGAAGAGATAACCCGCATTGCCGACGAAACAGCCATGGCGATGCAGTC
CTCTTCACAGGCTGTGGCCGACCTTGCCCGTCTGGCAGACGATCTGCACACCGTTATTGCACAGATGAAAAGCGATAACG
CGGCATAG

Upstream 100 bases:

>100_bases
AAAAATACAACAAGTTCACTTCCATAGACAGCTTGCGGCATAAAGTGGATATACACACTATCCTCCGTCAGTCATACATC
TTTCGAAATAAGGAGCAGTG

Downstream 100 bases:

>100_bases
CGCCCCCTGCCCTGCTCAACCCGCAAACCAAAACACGCCCCGAGAGGGCGTGTTTTGGTTATTCTGCGCAGTAATCCATT
ACGGAGCCCTACGCTCCGTG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 775; Mature: 775

Protein sequence:

>775_residues
MNLRSISAQLSALITVLIVLTIGALIFFATASSYESTIENQEANIKTLNNQIVSSTEHILASNIASTQAFGERRYVVNAL
RYNNARSIPIKEYQNTVESLDLISSLLVTDTQGNILGGVNEKNETVTDGREEDEKLIEAVAQGKKYIAGYAVRSEKTGDA
LVKLAAPIIDPITEKVLGGVIACLDWSRISENFISHVTIGKAGYIVVTDNAGVVITHPDKTVQFTSLAGFDFMQQALQHD
ETAIFYSWKGKKKALISATIPATGFKVLSTSYADDLAAAAATQRNMLMLTGTVAAVTLIAVVLFFMQRMVIRPLRCLQDY
TNSVASGNLSAVMTGSHRYEMAALSTGLQNMVQELKDKLAFSRSVLEGITLPLLIVDKDEKATFINTPCLEMLQIDKTPE
QCLGRTLADLFYNDPGRKTAVGRSMAEKQVISNLEVTITGHKGRQTEVLANVTYLQDMEGTITGGMCLYLDMTEFKKQQR
RIAEQNKRIAETAENAGNIAEQLASASAELSSQIEQSSRGTDIQRERTGETAAAMEQMNATVLEVARNATATAGLSEQTK
QKAFEGGRVAQQTIEKITLAHEQALALKADMAELGQQAEGIGAIMNVIADIADQTNLLALNAAIEAARAGDAGRGFAVVA
DEVRKLAEKTMSATQEVGQSIKRIQQSTQKNIRNTESAATAISAGAEMVTLSGKALEEIMQLVQESADQVNSIATAAEEQ
SATSEQINRSTEEITRIADETAMAMQSSSQAVADLARLADDLHTVIAQMKSDNAA

Sequences:

>Translated_775_residues
MNLRSISAQLSALITVLIVLTIGALIFFATASSYESTIENQEANIKTLNNQIVSSTEHILASNIASTQAFGERRYVVNAL
RYNNARSIPIKEYQNTVESLDLISSLLVTDTQGNILGGVNEKNETVTDGREEDEKLIEAVAQGKKYIAGYAVRSEKTGDA
LVKLAAPIIDPITEKVLGGVIACLDWSRISENFISHVTIGKAGYIVVTDNAGVVITHPDKTVQFTSLAGFDFMQQALQHD
ETAIFYSWKGKKKALISATIPATGFKVLSTSYADDLAAAAATQRNMLMLTGTVAAVTLIAVVLFFMQRMVIRPLRCLQDY
TNSVASGNLSAVMTGSHRYEMAALSTGLQNMVQELKDKLAFSRSVLEGITLPLLIVDKDEKATFINTPCLEMLQIDKTPE
QCLGRTLADLFYNDPGRKTAVGRSMAEKQVISNLEVTITGHKGRQTEVLANVTYLQDMEGTITGGMCLYLDMTEFKKQQR
RIAEQNKRIAETAENAGNIAEQLASASAELSSQIEQSSRGTDIQRERTGETAAAMEQMNATVLEVARNATATAGLSEQTK
QKAFEGGRVAQQTIEKITLAHEQALALKADMAELGQQAEGIGAIMNVIADIADQTNLLALNAAIEAARAGDAGRGFAVVA
DEVRKLAEKTMSATQEVGQSIKRIQQSTQKNIRNTESAATAISAGAEMVTLSGKALEEIMQLVQESADQVNSIATAAEEQ
SATSEQINRSTEEITRIADETAMAMQSSSQAVADLARLADDLHTVIAQMKSDNAA
>Mature_775_residues
MNLRSISAQLSALITVLIVLTIGALIFFATASSYESTIENQEANIKTLNNQIVSSTEHILASNIASTQAFGERRYVVNAL
RYNNARSIPIKEYQNTVESLDLISSLLVTDTQGNILGGVNEKNETVTDGREEDEKLIEAVAQGKKYIAGYAVRSEKTGDA
LVKLAAPIIDPITEKVLGGVIACLDWSRISENFISHVTIGKAGYIVVTDNAGVVITHPDKTVQFTSLAGFDFMQQALQHD
ETAIFYSWKGKKKALISATIPATGFKVLSTSYADDLAAAAATQRNMLMLTGTVAAVTLIAVVLFFMQRMVIRPLRCLQDY
TNSVASGNLSAVMTGSHRYEMAALSTGLQNMVQELKDKLAFSRSVLEGITLPLLIVDKDEKATFINTPCLEMLQIDKTPE
QCLGRTLADLFYNDPGRKTAVGRSMAEKQVISNLEVTITGHKGRQTEVLANVTYLQDMEGTITGGMCLYLDMTEFKKQQR
RIAEQNKRIAETAENAGNIAEQLASASAELSSQIEQSSRGTDIQRERTGETAAAMEQMNATVLEVARNATATAGLSEQTK
QKAFEGGRVAQQTIEKITLAHEQALALKADMAELGQQAEGIGAIMNVIADIADQTNLLALNAAIEAARAGDAGRGFAVVA
DEVRKLAEKTMSATQEVGQSIKRIQQSTQKNIRNTESAATAISAGAEMVTLSGKALEEIMQLVQESADQVNSIATAAEEQ
SATSEQINRSTEEITRIADETAMAMQSSSQAVADLARLADDLHTVIAQMKSDNAA

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=241, Percent_Identity=33.195020746888, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI2367378, Length=238, Percent_Identity=33.6134453781513, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1788194, Length=273, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=2e-24,
Organism=Escherichia coli, GI1787690, Length=254, Percent_Identity=32.2834645669291, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1789453, Length=256, Percent_Identity=29.6875, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 83530; Mature: 83530

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50885 HAMP ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRSISAQLSALITVLIVLTIGALIFFATASSYESTIENQEANIKTLNNQIVSSTEHIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ASNIASTQAFGERRYVVNALRYNNARSIPIKEYQNTVESLDLISSLLVTDTQGNILGGVN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
EKNETVTDGREEDEKLIEAVAQGKKYIAGYAVRSEKTGDALVKLAAPIIDPITEKVLGGV
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
IACLDWSRISENFISHVTIGKAGYIVVTDNAGVVITHPDKTVQFTSLAGFDFMQQALQHD
HHHHHHHHHHHHHHHHEEECCCCEEEEECCCCEEEECCCCCEEEEHHCCHHHHHHHHCCC
ETAIFYSWKGKKKALISATIPATGFKVLSTSYADDLAAAAATQRNMLMLTGTVAAVTLIA
CCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
VVLFFMQRMVIRPLRCLQDYTNSVASGNLSAVMTGSHRYEMAALSTGLQNMVQELKDKLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FSRSVLEGITLPLLIVDKDEKATFINTPCLEMLQIDKTPEQCLGRTLADLFYNDPGRKTA
HHHHHHHCCCEEEEEEECCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH
VGRSMAEKQVISNLEVTITGHKGRQTEVLANVTYLQDMEGTITGGMCLYLDMTEFKKQQR
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH
RIAEQNKRIAETAENAGNIAEQLASASAELSSQIEQSSRGTDIQRERTGETAAAMEQMNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHH
TVLEVARNATATAGLSEQTKQKAFEGGRVAQQTIEKITLAHEQALALKADMAELGQQAEG
HHHHHHHCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAIMNVIADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATQEVGQS
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IKRIQQSTQKNIRNTESAATAISAGAEMVTLSGKALEEIMQLVQESADQVNSIATAAEEQ
HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATSEQINRSTEEITRIADETAMAMQSSSQAVADLARLADDLHTVIAQMKSDNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLRSISAQLSALITVLIVLTIGALIFFATASSYESTIENQEANIKTLNNQIVSSTEHIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ASNIASTQAFGERRYVVNALRYNNARSIPIKEYQNTVESLDLISSLLVTDTQGNILGGVN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
EKNETVTDGREEDEKLIEAVAQGKKYIAGYAVRSEKTGDALVKLAAPIIDPITEKVLGGV
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
IACLDWSRISENFISHVTIGKAGYIVVTDNAGVVITHPDKTVQFTSLAGFDFMQQALQHD
HHHHHHHHHHHHHHHHEEECCCCEEEEECCCCEEEECCCCCEEEEHHCCHHHHHHHHCCC
ETAIFYSWKGKKKALISATIPATGFKVLSTSYADDLAAAAATQRNMLMLTGTVAAVTLIA
CCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
VVLFFMQRMVIRPLRCLQDYTNSVASGNLSAVMTGSHRYEMAALSTGLQNMVQELKDKLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FSRSVLEGITLPLLIVDKDEKATFINTPCLEMLQIDKTPEQCLGRTLADLFYNDPGRKTA
HHHHHHHCCCEEEEEEECCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH
VGRSMAEKQVISNLEVTITGHKGRQTEVLANVTYLQDMEGTITGGMCLYLDMTEFKKQQR
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH
RIAEQNKRIAETAENAGNIAEQLASASAELSSQIEQSSRGTDIQRERTGETAAAMEQMNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHH
TVLEVARNATATAGLSEQTKQKAFEGGRVAQQTIEKITLAHEQALALKADMAELGQQAEG
HHHHHHHCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAIMNVIADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATQEVGQS
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IKRIQQSTQKNIRNTESAATAISAGAEMVTLSGKALEEIMQLVQESADQVNSIATAAEEQ
HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATSEQINRSTEEITRIADETAMAMQSSSQAVADLARLADDLHTVIAQMKSDNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]