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The map label for this gene is yxkH [H]

Identifier: 78356701

GI number: 78356701

Start: 1710310

End: 1711410

Strand: Reverse

Name: yxkH [H]

Synonym: Dde_1658

Alternate gene names: 78356701

Gene position: 1711410-1710310 (Counterclockwise)

Preceding gene: 78356708

Following gene: 78356696

Centisome position: 45.88

GC content: 54.59

Gene sequence:

>1101_bases
ATGACAAAGAGTCTGCCGGTACTCATGTACCATTATGTCAGCAAGTGCGAAGGCTCCATATCCGTTGATCCGCGTACATT
CGAAGATCATTGCAGAACCCTTGCGGCCCGCGGCTGGCACGGCATAAGCCTGCACGAAGCAGAACAGTTTCTGCTTAACG
GCACGCCCCTGCCCCGCAGATCCGTTCTGATAACCTTTGATGACGGCTATCTGGACAACTACATATATGCCTGGCCCGTT
CTTAAAAAATACGGGCACAAGGCCGTCATTTTCGCGGTTACCTCTAAAATTGAAAACCACGCCACCCTGAGGCCGACCAT
CGACGATATCCGCGAAGGAAGGGCCAGACCTGACGCTCTGCCTCAGGTAGATAAACCTTTCATTGAAATTGCAGAAGGTG
TGGCGGAACGTCAGGACACATTTTTCAGCTGGAGCGAGGCGCGGGCCATGGAAGCTTCCGGCGTTATCACCATTGCAGCG
CACTCGCATTCTCATGCCAACATTTTCTGCGGGCACGAATACTCAGGTTTTATCTTTCCCCGCGGCAGAGGGCGCACTTT
TTATGAGGTTGAAGGTGAAAACCTGTGGGGTATGCCGGCATATCCCAAGGCTCCTGCGTTTTCCGGTAATGCATTTCTGC
CTTCTGCACGGCTGATGGACATAGTGCGCAGCACTGTGCCCCAGAACAAGATTGAAGCCTATAACTTTGCACAGCAACAG
GAAAACAGGGACAGACTGCAACGCAAGCTGGATGCGCTGTCCGCAACAGAGGCCGGCCGCTATGAAACAGATGAGGAACG
CGACGCCCGTTTTACAAAAGACATCGCCGCCTGCAAGGCTTTGCTTGAAAAAGAACTGGGCCATGCAAGACGGTCTTTCT
GCTGGCCATGGGGCGTGGCGGGAACAGCGGCTAAACTTATGGCGGAGCAGCAGGGTTTCAATGTCTTCTTTACCACTGCT
CCCGGCGCCAACCCGCCGCACTCTGCCGGTGCAGTGCACCGCTTCAAGGTAAAAAACAGGCCCGCCCGCTGGCTGCTCTC
GCGGGTCAGGCTGTATGCAAATCCCGCGGCAGCGCGGATTTATTCGTTTCTGCGCAGATAA

Upstream 100 bases:

>100_bases
GACAGCATCCTGATGATGCGGCCATCCTGCGGTCTGCAACCGTCGACGGCCTCGTTATTTCAAGTAATCCGTATTAATCA
GCAGTCAAGCGAAATTACTC

Downstream 100 bases:

>100_bases
CAACAAGGCGCGGCAGCCTGACAGTCTGCCGCGCCTTGATTTTCCATCCGGACGAAAGGGCGTCAGCAAGCTGCGCGGAC
AGCCTGTACAAATTCGGCCA

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTKSLPVLMYHYVSKCEGSISVDPRTFEDHCRTLAARGWHGISLHEAEQFLLNGTPLPRRSVLITFDDGYLDNYIYAWPV
LKKYGHKAVIFAVTSKIENHATLRPTIDDIREGRARPDALPQVDKPFIEIAEGVAERQDTFFSWSEARAMEASGVITIAA
HSHSHANIFCGHEYSGFIFPRGRGRTFYEVEGENLWGMPAYPKAPAFSGNAFLPSARLMDIVRSTVPQNKIEAYNFAQQQ
ENRDRLQRKLDALSATEAGRYETDEERDARFTKDIAACKALLEKELGHARRSFCWPWGVAGTAAKLMAEQQGFNVFFTTA
PGANPPHSAGAVHRFKVKNRPARWLLSRVRLYANPAAARIYSFLRR

Sequences:

>Translated_366_residues
MTKSLPVLMYHYVSKCEGSISVDPRTFEDHCRTLAARGWHGISLHEAEQFLLNGTPLPRRSVLITFDDGYLDNYIYAWPV
LKKYGHKAVIFAVTSKIENHATLRPTIDDIREGRARPDALPQVDKPFIEIAEGVAERQDTFFSWSEARAMEASGVITIAA
HSHSHANIFCGHEYSGFIFPRGRGRTFYEVEGENLWGMPAYPKAPAFSGNAFLPSARLMDIVRSTVPQNKIEAYNFAQQQ
ENRDRLQRKLDALSATEAGRYETDEERDARFTKDIAACKALLEKELGHARRSFCWPWGVAGTAAKLMAEQQGFNVFFTTA
PGANPPHSAGAVHRFKVKNRPARWLLSRVRLYANPAAARIYSFLRR
>Mature_365_residues
TKSLPVLMYHYVSKCEGSISVDPRTFEDHCRTLAARGWHGISLHEAEQFLLNGTPLPRRSVLITFDDGYLDNYIYAWPVL
KKYGHKAVIFAVTSKIENHATLRPTIDDIREGRARPDALPQVDKPFIEIAEGVAERQDTFFSWSEARAMEASGVITIAAH
SHSHANIFCGHEYSGFIFPRGRGRTFYEVEGENLWGMPAYPKAPAFSGNAFLPSARLMDIVRSTVPQNKIEAYNFAQQQE
NRDRLQRKLDALSATEAGRYETDEERDARFTKDIAACKALLEKELGHARRSFCWPWGVAGTAAKLMAEQQGFNVFFTTAP
GANPPHSAGAVHRFKVKNRPARWLLSRVRLYANPAAARIYSFLRR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=103, Percent_Identity=39.8058252427184, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 41335; Mature: 41204

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSLPVLMYHYVSKCEGSISVDPRTFEDHCRTLAARGWHGISLHEAEQFLLNGTPLPRR
CCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
SVLITFDDGYLDNYIYAWPVLKKYGHKAVIFAVTSKIENHATLRPTIDDIREGRARPDAL
EEEEEECCCCCCCEEEECHHHHHCCCCEEEEEEEHHHCCCCCCCCCHHHHHCCCCCCCCC
PQVDKPFIEIAEGVAERQDTFFSWSEARAMEASGVITIAAHSHSHANIFCGHEYSGFIFP
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEE
RGRGRTFYEVEGENLWGMPAYPKAPAFSGNAFLPSARLMDIVRSTVPQNKIEAYNFAQQQ
CCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
ENRDRLQRKLDALSATEAGRYETDEERDARFTKDIAACKALLEKELGHARRSFCWPWGVA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
GTAAKLMAEQQGFNVFFTTAPGANPPHSAGAVHRFKVKNRPARWLLSRVRLYANPAAARI
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHH
YSFLRR
HHHHHC
>Mature Secondary Structure 
TKSLPVLMYHYVSKCEGSISVDPRTFEDHCRTLAARGWHGISLHEAEQFLLNGTPLPRR
CCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
SVLITFDDGYLDNYIYAWPVLKKYGHKAVIFAVTSKIENHATLRPTIDDIREGRARPDAL
EEEEEECCCCCCCEEEECHHHHHCCCCEEEEEEEHHHCCCCCCCCCHHHHHCCCCCCCCC
PQVDKPFIEIAEGVAERQDTFFSWSEARAMEASGVITIAAHSHSHANIFCGHEYSGFIFP
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEE
RGRGRTFYEVEGENLWGMPAYPKAPAFSGNAFLPSARLMDIVRSTVPQNKIEAYNFAQQQ
CCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
ENRDRLQRKLDALSATEAGRYETDEERDARFTKDIAACKALLEKELGHARRSFCWPWGVA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
GTAAKLMAEQQGFNVFFTTAPGANPPHSAGAVHRFKVKNRPARWLLSRVRLYANPAAARI
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHH
YSFLRR
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]