| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is yqfF [H]
Identifier: 78356695
GI number: 78356695
Start: 1703738
End: 1706080
Strand: Reverse
Name: yqfF [H]
Synonym: Dde_1652
Alternate gene names: 78356695
Gene position: 1706080-1703738 (Counterclockwise)
Preceding gene: 78356696
Following gene: 78356694
Centisome position: 45.74
GC content: 56.42
Gene sequence:
>2343_bases ATGAGCATAGTGAAAAAGCCTAACGGCGGTCCGCAGGTAAGCGGCATACGCCCCCGCAAAAAAACCGTTCCGGCAGCCGG AATAGCGTTTCTGTTCATCAGTCTGCTCTGCCTGTCCGTTGCGGCTTCGGTGCAGTTTGAAAACAGCCCCACTGTATATC TGGCAGGCGAAGTTGCCGAACGCGACATTCAGGCCGATCAGGAACTGCGGGTTGAAGATGCAGCCGCCACTGAAGCACGG CGCAACGAAGTTGCACGCACGCAGCCGCCGCTTTTTGACCTGAGCACCGCCACCATAGATGTGCTGCGCGCCAATGTGAA CGCCACTCTGGAGTCTTTGCGCAACCTGTCCGCAGACAGACACGAAACCCACCGTCAGCAGCTGGCGGAAATGCTGAACA GCGATATTTCGACGCGCACCTTTGATATCTGGCGCACCCCCGTGTTCGCCACCCTGCTGCAGCGTGAAGTGCTGCCGTGG CTCGAAACACGCCTTGCCTCAGGCGTTGTGGCCGACCAGCGCATCCTGCTGCAGGAACGTAACGGCATCATCGTCCGCGA TCTTTCCTCCGGTTCCGAGGTGTTGCGCGAAGACCTGCGCTATGTGCCCGACATAGAAAAGCTGGAAAAAGATATGGAAA GCTTTCTGCGGCACGACCTTAATATTCCCCTGCGCATGCGCCGCGCCGTGACAGACATGCTCTTTCCTCTGCTGGCGCCC ACTCTGACTCTGAACAGAGAAGCCACAACCCGCAGAACACAGGAAGTGCGCAATGCGGTTTCGCCGGTGTATTACCGTCT GCAGAAAGGTGAAATCATTGTCAGACAGGGTGAAAAAGTAACCGAAGACATGCAGCTTAAACTGCAGGCTCTTGTGTCGC AGAAACAGGAACATCTGTCCGCACCGCGTGTTGCGGGCGTTTTTCTGACGGCACTCATTCTGGCCGCCGGGCTGCTTTTT TCACACCGTACAGGCAGTTTTTCATTCAAAAGCAGCAAAGACATCATTTTCCTTTCCTGCGTGGTACTTGCTTTTGCCGG CATGGCCAAAGGGCTGGATGTGCTGGGGGCGGCGCTGGCCGAAGGCAAAGGGGGCGACTCATTCGAGCTTCTGCCGTTTC TGCTGCCTGTGGCAAGCGCGGGCGGACTGATCGGGCTCATATTTTCATTCAGGCGCTGCGTCACCACATCGCTGCTGCTG GCCTTCATCTGCATGGCAATGATGGACGGCGGCACAGATGTCATGCTCTTTTTCTTTCTGTCATCCGTCTGGGGTGCATG GGTCATCCGGCGGGCTCAGACCAGACAGGAGGTTGTCTGGAGCCTTTTGCCGCTAGCAGGGGGCATACTTGCCCTGTGGT GCGGAATGGCCTTTCTGGAAGGCTCGGGCTGGGCACGTTTCGGTTACGGACTGATGCTTGCTTCGGCCAACGCCGTTCTT TCACTGCTGCTCATTTTTGCTCTCAGCCCCATTGTCGAGCTGGCCTTCCGCTATACCACGCGTTTCCGCCTGATGGAACT GATGAATCTGGAGCAGCCGCTGCTGCAGGAGCTTATGGTCACAGTGCCCGGAACGTATCACCACTCACTCATCGTGGCGA ACATGGTTGAAGCCGGGGCAAAGGCAATCGGCGCCAACAGTCTGCTGTGCAAAGTGGCCGCGCTGTATCATGACATCGGC AAACTGGCCAAACCGGAATATTTCATCGAGAATCAGGCCGGCGGCAAGAACAAGCATAACAAGCTGGCTCCTTCCATGAG CGCACTCATTCTGCTGTCTCATGTCAAAAAAGGAGTGGAAATGGCCCGCCAGCACCGGCTGGGTAACCGGATAACGGACA TTATTCAGCAGCATCACGGCACATCGCTGATCCGCTTTTTCTACCAGAAAGCCATCGATAACGGCGAAAACCCCAGAACC GAGGATTACAGCTATCCCGGCCCCAAACCACAAAGCCGTGAAGCCGCCATCGTCATGCTGGCCGATGCCGTGGAAGCGTC CAGCCGCACGCTGAACGAACCGACGCCAAGCCGCATCCGAGGGCACATTGAAACAATCATGAAAAACATCTTTGCCGAAG GGCAGCTGGATGAATCCGAACTGACTTTCAGGCAGCTGTCTATGCTGACAGACAGCTTTCACCGCATTCTGGCCGGCATA TTCCACCAGCGCATAGAGTACCCCGACGCGAAACAGGGACAACGCGCAGCCTCTCAGGAAGATAAAAGCGAAAAGAAAAA ACAGGCCGTGTCGCAACAGCCTGAAAAAAGAACCACGCTCATCGCTGTTTCCGACAGACCTGCCCGTCCCCAGACATCTG CGCGCAGCGGAGAACAGCCATGA
Upstream 100 bases:
>100_bases GGCAACGTCAAGGGAATACGTTTTCTGCATTTTCATGAAGACGATGTCATCCGGCACCCTCTTGTGGGCAGGATAGTTCA GGCATACGACCGGTTTGAAA
Downstream 100 bases:
>100_bases TTGTCATAACAACACGCACCGGTGCCATGACCGGTTTTCCTCTTTCCCGTCACGACATCAGAATAGCACTGCATAGCATG CTTAGCTGTCTTGGACTTTC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MSIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAERDIQADQELRVEDAAATEAR RNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADRHETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPW LETRLASGVVADQRILLQERNGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLSAPRVAGVFLTALILAAGLLF SHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALAEGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLL AFICMAMMDGGTDVMLFFFLSSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGAKAIGANSLLCKVAALYHDIG KLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVEMARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRT EDYSYPGPKPQSREAAIVMLADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP
Sequences:
>Translated_780_residues MSIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAERDIQADQELRVEDAAATEAR RNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADRHETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPW LETRLASGVVADQRILLQERNGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLSAPRVAGVFLTALILAAGLLF SHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALAEGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLL AFICMAMMDGGTDVMLFFFLSSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGAKAIGANSLLCKVAALYHDIG KLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVEMARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRT EDYSYPGPKPQSREAAIVMLADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP >Mature_779_residues SIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAERDIQADQELRVEDAAATEARR NEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADRHETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPWL ETRLASGVVADQRILLQERNGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAPT LTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLSAPRVAGVFLTALILAAGLLFS HRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALAEGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLLA FICMAMMDGGTDVMLFFFLSSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVLS LLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGAKAIGANSLLCKVAALYHDIGK LAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVEMARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRTE DYSYPGPKPQSREAAIVMLADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGIF HQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 86527; Mature: 86396
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAE CCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHH RDIQADQELRVEDAAATEARRNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADR HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH HETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPWLETRLASGVVADQRILLQER HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP CCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLS HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC APRVAGVFLTALILAAGLLFSHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLLAFICMAMMDGGTDVMLFFFL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KAIGANSLLCKVAALYHDIGKLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVE HHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRTEDYSYPGPKPQSREAAIVML HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE ADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAE CCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHH RDIQADQELRVEDAAATEARRNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADR HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH HETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPWLETRLASGVVADQRILLQER HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP CCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLS HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC APRVAGVFLTALILAAGLLFSHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLLAFICMAMMDGGTDVMLFFFL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KAIGANSLLCKVAALYHDIGKLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVE HHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRTEDYSYPGPKPQSREAAIVML HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE ADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]