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The map label for this gene is ydjX [H]

Identifier: 78356638

GI number: 78356638

Start: 1624766

End: 1625449

Strand: Reverse

Name: ydjX [H]

Synonym: Dde_1595

Alternate gene names: 78356638

Gene position: 1625449-1624766 (Counterclockwise)

Preceding gene: 78356639

Following gene: 78356634

Centisome position: 43.58

GC content: 57.16

Gene sequence:

>684_bases
ATGAACAAAAAAAATAAAGCAGTCGCCAAAACCTTCATGATTTTTGCCGCACTGGCCGCTGTCATTTACGCGGTTCATGC
CGCAGGTCTCGATACCATGTTCGATACGGCATGGGTCGATACCCATATCCGCGGACGCGGCGTGTGGGGGTATGTCCTGT
TTCTGCTTGTCAGCGGCGGGCTGACTGCTGTGGGCGCTCCGCGGCAGTTTGTCAGCTTTCTGGCGGGGTACGCCTTCGGT
GCGCTGATGGGCACCGTATGGGGCGTGCTTGGCACCACGCTGGGCTGTGCCTTTGTTTTTGGCTGGGCCAGAGTGGCAGG
ACGGGGCTATGTGCTGAAAAAACACGGCAGACGTATAGAAAGACTGAATAACTTCATAGAGCGCAACCCCTTCAGCATGA
CACTGGTCATCCGCTGCCTGCCCGTGGGCAACAACCTGCTGACCAATCTTGCCGCCGGAGTAAGCAACATCCCCGCCGCA
ACATTTATCGGCGGTTCGTTCATCGGCTACATACCGCAAACCCTCATTTTTGCCCTGCTGGGCAGCGGGGTGCGGGTGGA
CCCTGTATGGCGGACCACCATCAGCGGCCTGCTGTTTGCCGTTTCCACCCTGCTGGGCTGGATGCTGTACCGGCGTTACA
GGGTAGAAAAAACACTGGACGACCCTGAAAACGGATCTGAATAG

Upstream 100 bases:

>100_bases
TGCTGTGTCTTTGCCGCACTGGAACAGGATCAGCTTTTATTCTGGGGACAGGCCGCGGCCATGATGTGCTACATAAAACT
GGCGCAGCACCAGAGCAGAA

Downstream 100 bases:

>100_bases
CCCGCCTGCACCAACTTGCATACTTTCCGGCTTTGCCGACAAAAAAACGCCGCCCGAGCATCTCTCAGGCGGCGTTTGTA
TTTTTATCCTCTGCAGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNKKNKAVAKTFMIFAALAAVIYAVHAAGLDTMFDTAWVDTHIRGRGVWGYVLFLLVSGGLTAVGAPRQFVSFLAGYAFG
ALMGTVWGVLGTTLGCAFVFGWARVAGRGYVLKKHGRRIERLNNFIERNPFSMTLVIRCLPVGNNLLTNLAAGVSNIPAA
TFIGGSFIGYIPQTLIFALLGSGVRVDPVWRTTISGLLFAVSTLLGWMLYRRYRVEKTLDDPENGSE

Sequences:

>Translated_227_residues
MNKKNKAVAKTFMIFAALAAVIYAVHAAGLDTMFDTAWVDTHIRGRGVWGYVLFLLVSGGLTAVGAPRQFVSFLAGYAFG
ALMGTVWGVLGTTLGCAFVFGWARVAGRGYVLKKHGRRIERLNNFIERNPFSMTLVIRCLPVGNNLLTNLAAGVSNIPAA
TFIGGSFIGYIPQTLIFALLGSGVRVDPVWRTTISGLLFAVSTLLGWMLYRRYRVEKTLDDPENGSE
>Mature_227_residues
MNKKNKAVAKTFMIFAALAAVIYAVHAAGLDTMFDTAWVDTHIRGRGVWGYVLFLLVSGGLTAVGAPRQFVSFLAGYAFG
ALMGTVWGVLGTTLGCAFVFGWARVAGRGYVLKKHGRRIERLNNFIERNPFSMTLVIRCLPVGNNLLTNLAAGVSNIPAA
TFIGGSFIGYIPQTLIFALLGSGVRVDPVWRTTISGLLFAVSTLLGWMLYRRYRVEKTLDDPENGSE

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=240, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24672; Mature: 24672

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKNKAVAKTFMIFAALAAVIYAVHAAGLDTMFDTAWVDTHIRGRGVWGYVLFLLVSGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
LTAVGAPRQFVSFLAGYAFGALMGTVWGVLGTTLGCAFVFGWARVAGRGYVLKKHGRRIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RLNNFIERNPFSMTLVIRCLPVGNNLLTNLAAGVSNIPAATFIGGSFIGYIPQTLIFALL
HHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GSGVRVDPVWRTTISGLLFAVSTLLGWMLYRRYRVEKTLDDPENGSE
CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKKNKAVAKTFMIFAALAAVIYAVHAAGLDTMFDTAWVDTHIRGRGVWGYVLFLLVSGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
LTAVGAPRQFVSFLAGYAFGALMGTVWGVLGTTLGCAFVFGWARVAGRGYVLKKHGRRIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RLNNFIERNPFSMTLVIRCLPVGNNLLTNLAAGVSNIPAATFIGGSFIGYIPQTLIFALL
HHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GSGVRVDPVWRTTISGLLFAVSTLLGWMLYRRYRVEKTLDDPENGSE
CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]