| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yheT [H]
Identifier: 78356574
GI number: 78356574
Start: 1549888
End: 1550868
Strand: Direct
Name: yheT [H]
Synonym: Dde_1531
Alternate gene names: 78356574
Gene position: 1549888-1550868 (Clockwise)
Preceding gene: 78356572
Following gene: 78356579
Centisome position: 41.55
GC content: 55.45
Gene sequence:
>981_bases ATGCCTGTTTTACCCGTTTCTTCATACAAGGGCAGCGGCCCGCTGGCAAACGGCCATGTTCAGACCATGTTTCCGGTACT GTTCCGTCCTATGCCGGTGGTGGAGTATCATCGTCAAAGGCTGGAAACGCCGGACGGTGATTTTCTGGATGTGGATTTTT CTTCTGCCGCAGCAGCTGCGCAGTCTGAAAGCATTGCCGTGATCTCTCACGGACTGGAAGGTCATTCCCGCAGGCGCTAT GTGCAGGGGATGGCACGGGTGCTAAATGCCCGGGGCTGGGATGCCGCAGCGTGGAATTTCCGCGGGTGCAGCGGCCAGCC CAACAGGTTGCCCCGCATGTACCATAGCGGTGATACGCAGGATCTGCATACCGTAGTGACAGCATGCGCACAAAAAGGCT ACCGCCGTATTCTGCTTGTCGGAGTGAGTATGGGCGGTAATCAGATTCTGAAATATCTTGGTGAAGATCCGGACCGTGTC GACAGCAGGGTATGCGGGGCTGTTGTTTTTTCTGTACCGTGCGATCTGGTTGGGGCGGCTCAGGTGCTGGGCAGACCGCA GAACAGCGTATACATGCGGTACTTTCTGCGCACGCTGCGGCAAAAAATCAAAGCCAAGCACGCCATGTATCCGGATACGA TTCAGATGGACGGGCTGGATTCCATACGTACCTTTGCGGAATTTGACGACCGGTATACCGCGCCGCTGCACGGTTTTTCC GGTGCCCTTGACTACTGGACAAAAAGTTCGTGCAGGCAGTTTCTTTCTTCTGTCAGGGTGCCCGCGTTGCTTGTCAACGC GCTGAACGACCCTTTTCTTTCCGCTTCCTGCTATCCGTACCGCGAAGCCCGGCAAAGCGGCAGCCTGTTTTTTGAAACTA CTGTGACCGGAGGTCATGTGGGGTTTGTCCAGTTTAACCGGCAGAACATCTACTGGTCCGAAGAGCGTCTGCTGTCCTTT ATGGATGAACAGGGGCTGTAG
Upstream 100 bases:
>100_bases GTATATCTGTTGTTATCATAACTGGCTGGTCCGTGGCGTTGCAGGAACGCTGCACTATCGTGTTCCGCGCTTTTTGTCAC GCGCCGCCCTGCGAGAAAAA
Downstream 100 bases:
>100_bases TGCCTGTGTGTCAGTTCAGTACCGGACATTCGGCATCTGCCCCGGCCAGCAGGGCATCCTCGTCCAGCCTGCGCGATTTT CCCACAAGGGTGGTGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPVLPVSSYKGSGPLANGHVQTMFPVLFRPMPVVEYHRQRLETPDGDFLDVDFSSAAAAAQSESIAVISHGLEGHSRRRY VQGMARVLNARGWDAAAWNFRGCSGQPNRLPRMYHSGDTQDLHTVVTACAQKGYRRILLVGVSMGGNQILKYLGEDPDRV DSRVCGAVVFSVPCDLVGAAQVLGRPQNSVYMRYFLRTLRQKIKAKHAMYPDTIQMDGLDSIRTFAEFDDRYTAPLHGFS GALDYWTKSSCRQFLSSVRVPALLVNALNDPFLSASCYPYREARQSGSLFFETTVTGGHVGFVQFNRQNIYWSEERLLSF MDEQGL
Sequences:
>Translated_326_residues MPVLPVSSYKGSGPLANGHVQTMFPVLFRPMPVVEYHRQRLETPDGDFLDVDFSSAAAAAQSESIAVISHGLEGHSRRRY VQGMARVLNARGWDAAAWNFRGCSGQPNRLPRMYHSGDTQDLHTVVTACAQKGYRRILLVGVSMGGNQILKYLGEDPDRV DSRVCGAVVFSVPCDLVGAAQVLGRPQNSVYMRYFLRTLRQKIKAKHAMYPDTIQMDGLDSIRTFAEFDDRYTAPLHGFS GALDYWTKSSCRQFLSSVRVPALLVNALNDPFLSASCYPYREARQSGSLFFETTVTGGHVGFVQFNRQNIYWSEERLLSF MDEQGL >Mature_325_residues PVLPVSSYKGSGPLANGHVQTMFPVLFRPMPVVEYHRQRLETPDGDFLDVDFSSAAAAAQSESIAVISHGLEGHSRRRYV QGMARVLNARGWDAAAWNFRGCSGQPNRLPRMYHSGDTQDLHTVVTACAQKGYRRILLVGVSMGGNQILKYLGEDPDRVD SRVCGAVVFSVPCDLVGAAQVLGRPQNSVYMRYFLRTLRQKIKAKHAMYPDTIQMDGLDSIRTFAEFDDRYTAPLHGFSG ALDYWTKSSCRQFLSSVRVPALLVNALNDPFLSASCYPYREARQSGSLFFETTVTGGHVGFVQFNRQNIYWSEERLLSFM DEQGL
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI194578891, Length=323, Percent_Identity=28.7925696594427, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI23397663, Length=304, Percent_Identity=29.6052631578947, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI23397659, Length=313, Percent_Identity=25.8785942492013, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI23397661, Length=313, Percent_Identity=25.8785942492013, Blast_Score=93, Evalue=4e-19, Organism=Escherichia coli, GI1789752, Length=292, Percent_Identity=36.986301369863, Blast_Score=187, Evalue=8e-49, Organism=Caenorhabditis elegans, GI17566110, Length=306, Percent_Identity=24.5098039215686, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71985405, Length=305, Percent_Identity=23.2786885245902, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323866, Length=359, Percent_Identity=24.7910863509749, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6325162, Length=295, Percent_Identity=26.4406779661017, Blast_Score=96, Evalue=8e-21, Organism=Drosophila melanogaster, GI24652003, Length=294, Percent_Identity=28.5714285714286, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI281398151, Length=294, Percent_Identity=28.5714285714286, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24581365, Length=311, Percent_Identity=25.08038585209, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 36423; Mature: 36292
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLPVSSYKGSGPLANGHVQTMFPVLFRPMPVVEYHRQRLETPDGDFLDVDFSSAAAAA CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHH QSESIAVISHGLEGHSRRRYVQGMARVLNARGWDAAAWNFRGCSGQPNRLPRMYHSGDTQ CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCH DLHTVVTACAQKGYRRILLVGVSMGGNQILKYLGEDPDRVDSRVCGAVVFSVPCDLVGAA HHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH QVLGRPQNSVYMRYFLRTLRQKIKAKHAMYPDTIQMDGLDSIRTFAEFDDRYTAPLHGFS HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCC GALDYWTKSSCRQFLSSVRVPALLVNALNDPFLSASCYPYREARQSGSLFFETTVTGGHV CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCEE GFVQFNRQNIYWSEERLLSFMDEQGL EEEEECCCCCEECHHHHHHHHHHCCC >Mature Secondary Structure PVLPVSSYKGSGPLANGHVQTMFPVLFRPMPVVEYHRQRLETPDGDFLDVDFSSAAAAA CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHH QSESIAVISHGLEGHSRRRYVQGMARVLNARGWDAAAWNFRGCSGQPNRLPRMYHSGDTQ CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCH DLHTVVTACAQKGYRRILLVGVSMGGNQILKYLGEDPDRVDSRVCGAVVFSVPCDLVGAA HHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH QVLGRPQNSVYMRYFLRTLRQKIKAKHAMYPDTIQMDGLDSIRTFAEFDDRYTAPLHGFS HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCC GALDYWTKSSCRQFLSSVRVPALLVNALNDPFLSASCYPYREARQSGSLFFETTVTGGHV CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCEE GFVQFNRQNIYWSEERLLSFMDEQGL EEEEECCCCCEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]