| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yesN [H]
Identifier: 78356566
GI number: 78356566
Start: 1541882
End: 1542262
Strand: Direct
Name: yesN [H]
Synonym: Dde_1521
Alternate gene names: 78356566
Gene position: 1541882-1542262 (Clockwise)
Preceding gene: 78356565
Following gene: 78356567
Centisome position: 41.33
GC content: 51.18
Gene sequence:
>381_bases ATGTCTTACGAGTCTGTCACCGTTCTTGTCGTTGATGACGAAGAGATGGTGCGTGAAAATCTGGAGGCCTACCTTGAGGA CGAAGGCTTTAAGGTGGCTACTGCCGGAAGCGGCGAAGAAGCTCTGGAACTGCTGGCTTCTGTCTCTCCGCATGTGGGCA TCATAGACATGCGGCTGCCGGGCATGAGCGGCAACGACTTCATTATCAAAGCCCATGCCGTCAATCCTGCGTTACGGTAC CTCATCCATACCGGTTCTACCAACTACAAGCTGCCGGTAGAGGTGATGAATGTCGGTGTAACCCATGAAGATATCTATAT AAAGCCTTTGCAGAATATGGATATGCTGGTACGGGGCATTGATCGCCTGCTGGCAAAATGA
Upstream 100 bases:
>100_bases TCAGATATCGTAAATGGGGTATTTCGCGGGACGCACTTAACCAAACCGCCGGCACTGGCGGCTATGCCTGTGTCTGTGCG GCCGAATTACCGGAGCCTTC
Downstream 100 bases:
>100_bases GACACAGGATGGCTGAGTGTGCTCTTCCCCGCGTGCTGGCTATAGATGACGAGTCTTCCGTCCGGCAGAGTCTGGCGATT TTTTTTGAAGACTGCGGTTA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSYESVTVLVVDDEEMVRENLEAYLEDEGFKVATAGSGEEALELLASVSPHVGIIDMRLPGMSGNDFIIKAHAVNPALRY LIHTGSTNYKLPVEVMNVGVTHEDIYIKPLQNMDMLVRGIDRLLAK
Sequences:
>Translated_126_residues MSYESVTVLVVDDEEMVRENLEAYLEDEGFKVATAGSGEEALELLASVSPHVGIIDMRLPGMSGNDFIIKAHAVNPALRY LIHTGSTNYKLPVEVMNVGVTHEDIYIKPLQNMDMLVRGIDRLLAK >Mature_125_residues SYESVTVLVVDDEEMVRENLEAYLEDEGFKVATAGSGEEALELLASVSPHVGIIDMRLPGMSGNDFIIKAHAVNPALRYL IHTGSTNYKLPVEVMNVGVTHEDIYIKPLQNMDMLVRGIDRLLAK
Specific function: Member of the two-component regulatory system yesM/yesN [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018060 - InterPro: IPR001789 [H]
Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13931; Mature: 13800
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYESVTVLVVDDEEMVRENLEAYLEDEGFKVATAGSGEEALELLASVSPHVGIIDMRLP CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECC GMSGNDFIIKAHAVNPALRYLIHTGSTNYKLPVEVMNVGVTHEDIYIKPLQNMDMLVRGI CCCCCCEEEEEECCCHHHEEEEECCCCCCEEEHHHEEECCCCCCEEEECCCCHHHHHHHH DRLLAK HHHHCC >Mature Secondary Structure SYESVTVLVVDDEEMVRENLEAYLEDEGFKVATAGSGEEALELLASVSPHVGIIDMRLP CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECC GMSGNDFIIKAHAVNPALRYLIHTGSTNYKLPVEVMNVGVTHEDIYIKPLQNMDMLVRGI CCCCCCEEEEEECCCHHHEEEEECCCCCCEEEHHHEEECCCCCCEEEECCCCHHHHHHHH DRLLAK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]