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The map label for this gene is yibD [C]

Identifier: 78356530

GI number: 78356530

Start: 1504986

End: 1506269

Strand: Reverse

Name: yibD [C]

Synonym: Dde_1485

Alternate gene names: 78356530

Gene position: 1506269-1504986 (Counterclockwise)

Preceding gene: 78356531

Following gene: 78356528

Centisome position: 40.38

GC content: 59.81

Gene sequence:

>1284_bases
ATGCAGAGATATTCCCGCAACATGAACACTACCACACCCCTTTCAATCATCATACCTGTCTGGAACCAGTGGCATCTGAC
ACGGGCCTGTCTGGAAAGCCTGCGACAGCACACTCCCGGCGACTTCTTTGAAGTCATCGTGGCGGACAACGGCTCGGGAG
ACGAAACAGCCGTCCAGCTGGCTCCCCTCGGAGAGAAACTGTTCGGACGCATGTTCCGGCGCATAAGGCTGGACACCAAT
CAGGGCTTCGGACCGGCCTGCAATCTGGGTGCAAAGAGCGCCCGCGGTGAAAAGCTGCTGTTTCTCAACAATGACACGCT
GCTCACCTCAGGATGGCTGCCTCCGCTGATGAAGGCATTTGACGAGGACGCCAGGCTGGGCGCGGCGGGACCGCTGCTGC
TCTATCCCGAATCGGACAGGGTGCAGCACGCGGGTATCGTTTTCACCCCCGCACTGCGCACACAGCATCTGTACGCCAAC
TTTCCGGCAGACCATCCAGTGCTGCGCACCCGCAGAACGCTGCAGGCCATCACCGGTGCCTGTCTGCTCGTTCCTTCCGG
ACTGTTCCGGCAGTGCGGCGGTTTTTATGAAGGCTACAAAAACGGCAGCGAAGACCTTGAGCTATGCTGCCGCATCCGCG
AGGCGGGCAAAAAGCTGCGCTGCGTCACTGAAAGCAGGGTCTACCATCTGGAAAGCCAGACGCCGGGCCGGGGCGACGAT
GACGATACGAACGCGGCCCTGCTCAACCAGCGCTGCAAAGGCTGCTTCGGGCCGGACATGCACAGGCATGCGGTACGGGA
CGGCTACCGTTTTGCCATCACGCCATGGCTGGAATCGTACATAACGCTTGCAGAAGAGCGCGAGACTGCGCTTACATCAT
CCATGACCGGCGCCGGAGCAGGCGCAGGCGGAGAGTTCAACGCGGCGGCCTGCTGGCAACTGCTGCAGCAGGAACCGCTG
TGGCAGACAGGATACGCTCTGCTGGCCGGTTTTCTGGAACAGAACCGGCTGTACGCCGAAGCCAGCGGGGTACGCCTGCT
TCAGACGTACTTTTTTCCCATGCTTCCCCATTACCGCCAGCTGGCCGTCACGGCAGCCATGGCCGGAAATGAAAGTCTGG
CAGCACAGGCGCAGGAAAAAGCAGCCCATATCAACGGGCTGCTTGAAGATGTGGGCGCACTGACCAAAAAAGCGGCAGGA
CTGGCAAACTGGGCCAGAAAAGCTGGAGAACAGGAGTTGCAGCACCTGTATGAAGGCTGGCTGAAAGAACTGGGTCTGTT
ATAG

Upstream 100 bases:

>100_bases
TAAAACTGGAACACCTGTATCCCGCCGGTTCCGTACAGGCCGTACGCGAACAGGCGCTGGAAACGGCACGCAGCGACCTG
CTGCGCAAGCACTCCACCCT

Downstream 100 bases:

>100_bases
CTTCCCCCACAAAAAAAACCGGCCGCGGTCATACCCGCGGCCGGTTTTTTATCGCCTGAACCTGCATGTCACGCGGCGGC
TGATTGCGTCCGTCAGAGTC

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MQRYSRNMNTTTPLSIIIPVWNQWHLTRACLESLRQHTPGDFFEVIVADNGSGDETAVQLAPLGEKLFGRMFRRIRLDTN
QGFGPACNLGAKSARGEKLLFLNNDTLLTSGWLPPLMKAFDEDARLGAAGPLLLYPESDRVQHAGIVFTPALRTQHLYAN
FPADHPVLRTRRTLQAITGACLLVPSGLFRQCGGFYEGYKNGSEDLELCCRIREAGKKLRCVTESRVYHLESQTPGRGDD
DDTNAALLNQRCKGCFGPDMHRHAVRDGYRFAITPWLESYITLAEERETALTSSMTGAGAGAGGEFNAAACWQLLQQEPL
WQTGYALLAGFLEQNRLYAEASGVRLLQTYFFPMLPHYRQLAVTAAMAGNESLAAQAQEKAAHINGLLEDVGALTKKAAG
LANWARKAGEQELQHLYEGWLKELGLL

Sequences:

>Translated_427_residues
MQRYSRNMNTTTPLSIIIPVWNQWHLTRACLESLRQHTPGDFFEVIVADNGSGDETAVQLAPLGEKLFGRMFRRIRLDTN
QGFGPACNLGAKSARGEKLLFLNNDTLLTSGWLPPLMKAFDEDARLGAAGPLLLYPESDRVQHAGIVFTPALRTQHLYAN
FPADHPVLRTRRTLQAITGACLLVPSGLFRQCGGFYEGYKNGSEDLELCCRIREAGKKLRCVTESRVYHLESQTPGRGDD
DDTNAALLNQRCKGCFGPDMHRHAVRDGYRFAITPWLESYITLAEERETALTSSMTGAGAGAGGEFNAAACWQLLQQEPL
WQTGYALLAGFLEQNRLYAEASGVRLLQTYFFPMLPHYRQLAVTAAMAGNESLAAQAQEKAAHINGLLEDVGALTKKAAG
LANWARKAGEQELQHLYEGWLKELGLL
>Mature_427_residues
MQRYSRNMNTTTPLSIIIPVWNQWHLTRACLESLRQHTPGDFFEVIVADNGSGDETAVQLAPLGEKLFGRMFRRIRLDTN
QGFGPACNLGAKSARGEKLLFLNNDTLLTSGWLPPLMKAFDEDARLGAAGPLLLYPESDRVQHAGIVFTPALRTQHLYAN
FPADHPVLRTRRTLQAITGACLLVPSGLFRQCGGFYEGYKNGSEDLELCCRIREAGKKLRCVTESRVYHLESQTPGRGDD
DDTNAALLNQRCKGCFGPDMHRHAVRDGYRFAITPWLESYITLAEERETALTSSMTGAGAGAGGEFNAAACWQLLQQEPL
WQTGYALLAGFLEQNRLYAEASGVRLLQTYFFPMLPHYRQLAVTAAMAGNESLAAQAQEKAAHINGLLEDVGALTKKAAG
LANWARKAGEQELQHLYEGWLKELGLL

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 47231; Mature: 47231

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYSRNMNTTTPLSIIIPVWNQWHLTRACLESLRQHTPGDFFEVIVADNGSGDETAVQL
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE
APLGEKLFGRMFRRIRLDTNQGFGPACNLGAKSARGEKLLFLNNDTLLTSGWLPPLMKAF
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHC
DEDARLGAAGPLLLYPESDRVQHAGIVFTPALRTQHLYANFPADHPVLRTRRTLQAITGA
CCCCCCCCCCCEEECCCCCCCEECCEEEECCHHHCCEEECCCCCCCHHHHHHHHHHHHHH
CLLVPSGLFRQCGGFYEGYKNGSEDLELCCRIREAGKKLRCVTESRVYHLESQTPGRGDD
HHHCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCHHEEEEEHHHEEEECCCCCCCCCC
DDTNAALLNQRCKGCFGPDMHRHAVRDGYRFAITPWLESYITLAEERETALTSSMTGAGA
CCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCC
GAGGEFNAAACWQLLQQEPLWQTGYALLAGFLEQNRLYAEASGVRLLQTYFFPMLPHYRQ
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHCHHHHH
LAVTAAMAGNESLAAQAQEKAAHINGLLEDVGALTKKAAGLANWARKAGEQELQHLYEGW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LKELGLL
HHHHCCC
>Mature Secondary Structure
MQRYSRNMNTTTPLSIIIPVWNQWHLTRACLESLRQHTPGDFFEVIVADNGSGDETAVQL
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE
APLGEKLFGRMFRRIRLDTNQGFGPACNLGAKSARGEKLLFLNNDTLLTSGWLPPLMKAF
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHC
DEDARLGAAGPLLLYPESDRVQHAGIVFTPALRTQHLYANFPADHPVLRTRRTLQAITGA
CCCCCCCCCCCEEECCCCCCCEECCEEEECCHHHCCEEECCCCCCCHHHHHHHHHHHHHH
CLLVPSGLFRQCGGFYEGYKNGSEDLELCCRIREAGKKLRCVTESRVYHLESQTPGRGDD
HHHCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCHHEEEEEHHHEEEECCCCCCCCCC
DDTNAALLNQRCKGCFGPDMHRHAVRDGYRFAITPWLESYITLAEERETALTSSMTGAGA
CCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCC
GAGGEFNAAACWQLLQQEPLWQTGYALLAGFLEQNRLYAEASGVRLLQTYFFPMLPHYRQ
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHCHHHHH
LAVTAAMAGNESLAAQAQEKAAHINGLLEDVGALTKKAAGLANWARKAGEQELQHLYEGW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LKELGLL
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]