BacMap

Definition	Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession	NC_007519
Length	3,730,232

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The map label for this gene is natA [H]

Identifier: 78356521

GI number: 78356521

Start: 1495590

End: 1496237

Strand: Reverse

Name: natA [H]

Synonym: Dde_1476

Alternate gene names: 78356521

Gene position: 1496237-1495590 (Counterclockwise)

Preceding gene: 78356522

Following gene: 78356520

Centisome position: 40.11

GC content: 58.95

Gene sequence:

>648_bases
ATGCTGCTTAAACTGGAAAAGATAGCCAAATTCTACGGCACGAGACTGGTCATAAAAGATGTAAGCCTGAGCGTGACCTC
CGGCAGCATCACCCTGCTGGCCGGTGCCAACGGAGCTGGTAAATCCACTCTGCTGCGCATCATGGCCGGACTTGCCCGTC
CGAGTGCGGGCAAGGTGCTGTGTCATGCGGCCGAAGATAAAATTGGCTATCTGGGCCATCAGACGTTCATTTATCCGGAT
TTGTCCGCTCTGGAAAACCTGTCTTTCTGGGCAGGGCTGCACGGACGGCGGACTGACGAGCAGGCCCTGCTCGACATTCT
GGACCGCGTGGAACTGAAGCGGTTCGCCTTTGAAAGGGCGGGCAGTTTTTCGCGCGGAATGGCTCAGCGGCTGAATCTGG
CCCGGATTTTTCTGTTGCAGCCCGACCTAATTCTGCTGGACGAGCCGGGCACAGGACTGGATGTACGTTCCATGTCCATG
CTGCGGCGCGAAATAGAAGAAGCCCGTAACCGCGGTGCAGGCCTGGTCTGGATCAGCCACTCCGTGGCGGAAGATCTGGC
TCTGGCCGATGCGGTGGTTGCCATAGGGGACAGACGCGTGCTCTACAACGGCCCCGCCGCCGGCTACATTCCGGAGGCAG
CATGCTGA

Upstream 100 bases:

>100_bases
AACTGGCTGTGGATAGGCGGCACGCTGGCCAGCCTGTTCCCCTTCCTTGGCATGCGCGCCGTGCGCTCCCGCAGGAACAA
CGCCGCCATGGTGCAGGAAG

Downstream 100 bases:

>100_bases
ACGCAGCCATGCGCATAGCCGCCAAAGACCTGCGGCTGGTTCTCACCCGCGGCACGGGACTCACACAGGCACTGCTGCTC
GGCCTGCTGCTCATATTCGT

Product: ATPase

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: Na(+) ABC transporter [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLLKLEKIAKFYGTRLVIKDVSLSVTSGSITLLAGANGAGKSTLLRIMAGLARPSAGKVLCHAAEDKIGYLGHQTFIYPD
LSALENLSFWAGLHGRRTDEQALLDILDRVELKRFAFERAGSFSRGMAQRLNLARIFLLQPDLILLDEPGTGLDVRSMSM
LRREIEEARNRGAGLVWISHSVAEDLALADAVVAIGDRRVLYNGPAAGYIPEAAC

Sequences:

>Translated_215_residues
MLLKLEKIAKFYGTRLVIKDVSLSVTSGSITLLAGANGAGKSTLLRIMAGLARPSAGKVLCHAAEDKIGYLGHQTFIYPD
LSALENLSFWAGLHGRRTDEQALLDILDRVELKRFAFERAGSFSRGMAQRLNLARIFLLQPDLILLDEPGTGLDVRSMSM
LRREIEEARNRGAGLVWISHSVAEDLALADAVVAIGDRRVLYNGPAAGYIPEAAC
>Mature_215_residues
MLLKLEKIAKFYGTRLVIKDVSLSVTSGSITLLAGANGAGKSTLLRIMAGLARPSAGKVLCHAAEDKIGYLGHQTFIYPD
LSALENLSFWAGLHGRRTDEQALLDILDRVELKRFAFERAGSFSRGMAQRLNLARIFLLQPDLILLDEPGTGLDVRSMSM
LRREIEEARNRGAGLVWISHSVAEDLALADAVVAIGDRRVLYNGPAAGYIPEAAC

Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]

COG id: COG4555

COG function: function code CP; ABC-type Na+ transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI6005701, Length=187, Percent_Identity=29.9465240641711, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI27477115, Length=186, Percent_Identity=28.494623655914, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI27436953, Length=192, Percent_Identity=27.6041666666667, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI31657092, Length=194, Percent_Identity=28.3505154639175, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI47078218, Length=218, Percent_Identity=27.5229357798165, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI45446740, Length=218, Percent_Identity=27.5229357798165, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27881501, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI30795238, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI153792144, Length=190, Percent_Identity=25.7894736842105, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27262624, Length=191, Percent_Identity=27.7486910994764, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI27262626, Length=191, Percent_Identity=27.7486910994764, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI105990541, Length=205, Percent_Identity=27.8048780487805, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI116734710, Length=215, Percent_Identity=26.5116279069767, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI42741659, Length=209, Percent_Identity=25.8373205741627, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI9961252, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI4505771, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI46592978, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI46592898, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI46592971, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI46592956, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI46592915, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI46592964, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=29.8701298701299, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=28.936170212766, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=29.5238095238095, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1789032, Length=234, Percent_Identity=29.0598290598291, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788165, Length=198, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=26.7543859649123, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787370, Length=216, Percent_Identity=28.2407407407407, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87081782, Length=201, Percent_Identity=30.3482587064677, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789593, Length=217, Percent_Identity=30.8755760368664, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790739, Length=222, Percent_Identity=30.1801801801802, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789672, Length=207, Percent_Identity=24.6376811594203, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1790525, Length=214, Percent_Identity=28.9719626168224, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788472, Length=225, Percent_Identity=27.1111111111111, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787029, Length=218, Percent_Identity=23.8532110091743, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786698, Length=224, Percent_Identity=25.8928571428571, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790544, Length=240, Percent_Identity=28.3333333333333, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI87082268, Length=205, Percent_Identity=27.3170731707317, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1789586, Length=222, Percent_Identity=28.3783783783784, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI87082267, Length=230, Percent_Identity=27.8260869565217, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=30.2884615384615, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788210, Length=213, Percent_Identity=26.2910798122066, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789751, Length=209, Percent_Identity=33.9712918660287, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI48995001, Length=232, Percent_Identity=27.5862068965517, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787712, Length=209, Percent_Identity=22.488038277512, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=29.0476190476191, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=25.4310344827586, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI48994943, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789991, Length=230, Percent_Identity=26.0869565217391, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790190, Length=213, Percent_Identity=27.2300469483568, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786872, Length=225, Percent_Identity=24.8888888888889, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI87082064, Length=182, Percent_Identity=33.5164835164835, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1787041, Length=212, Percent_Identity=27.3584905660377, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787792, Length=217, Percent_Identity=26.2672811059908, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788450, Length=221, Percent_Identity=24.8868778280543, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790534, Length=235, Percent_Identity=28.0851063829787, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786803, Length=219, Percent_Identity=25.5707762557078, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1788225, Length=222, Percent_Identity=24.7747747747748, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1789873, Length=201, Percent_Identity=26.865671641791, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1787105, Length=210, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786319, Length=194, Percent_Identity=26.2886597938144, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=26.605504587156, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787758, Length=208, Percent_Identity=27.4038461538462, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=28.4403669724771, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=190, Percent_Identity=30, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1786345, Length=213, Percent_Identity=27.6995305164319, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788506, Length=222, Percent_Identity=27.9279279279279, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788897, Length=211, Percent_Identity=22.7488151658768, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786563, Length=219, Percent_Identity=26.027397260274, Blast_Score=60, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=211, Percent_Identity=31.2796208530806, Blast_Score=81, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17565586, Length=167, Percent_Identity=27.5449101796407, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17510237, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=227, Percent_Identity=29.5154185022026, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=227, Percent_Identity=29.5154185022026, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=227, Percent_Identity=29.5154185022026, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI133930907, Length=211, Percent_Identity=25.5924170616114, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323959, Length=211, Percent_Identity=24.6445497630332, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=198, Percent_Identity=28.7878787878788, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=183, Percent_Identity=31.1475409836066, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=204, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI116007184, Length=204, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=31.5789473684211, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573571, Length=229, Percent_Identity=27.0742358078603, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI28573573, Length=223, Percent_Identity=27.8026905829596, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24648314, Length=224, Percent_Identity=25.4464285714286, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=206, Percent_Identity=23.3009708737864, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221512771, Length=216, Percent_Identity=21.7592592592593, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574150, Length=190, Percent_Identity=27.3684210526316, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007328, Length=190, Percent_Identity=27.3684210526316, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24582014, Length=199, Percent_Identity=27.6381909547739, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24582012, Length=199, Percent_Identity=27.6381909547739, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24666836, Length=170, Percent_Identity=30.5882352941176, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28571209, Length=193, Percent_Identity=25.3886010362694, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574744, Length=211, Percent_Identity=27.4881516587678, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581191, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581189, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581193, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581195, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24650853, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650855, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24662800, Length=207, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281362751, Length=175, Percent_Identity=28, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85725262, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 23363; Mature: 23363

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKLEKIAKFYGTRLVIKDVSLSVTSGSITLLAGANGAGKSTLLRIMAGLARPSAGKVL
CCEEHHHHHHHHCCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE
CHAAEDKIGYLGHQTFIYPDLSALENLSFWAGLHGRRTDEQALLDILDRVELKRFAFERA
EEECCCCHHHCCCCEEECCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GSFSRGMAQRLNLARIFLLQPDLILLDEPGTGLDVRSMSMLRREIEEARNRGAGLVWISH
CCHHHHHHHHHCHHEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEH
SVAEDLALADAVVAIGDRRVLYNGPAAGYIPEAAC
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLLKLEKIAKFYGTRLVIKDVSLSVTSGSITLLAGANGAGKSTLLRIMAGLARPSAGKVL
CCEEHHHHHHHHCCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE
CHAAEDKIGYLGHQTFIYPDLSALENLSFWAGLHGRRTDEQALLDILDRVELKRFAFERA
EEECCCCHHHCCCCEEECCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GSFSRGMAQRLNLARIFLLQPDLILLDEPGTGLDVRSMSMLRREIEEARNRGAGLVWISH
CCHHHHHHHHHCHHEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEH
SVAEDLALADAVVAIGDRRVLYNGPAAGYIPEAAC
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9106203; 9274031; 9384377 [H]