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The map label for this gene is ygaD [C]

Identifier: 78356503

GI number: 78356503

Start: 1480126

End: 1480611

Strand: Reverse

Name: ygaD [C]

Synonym: Dde_1458

Alternate gene names: 78356503

Gene position: 1480611-1480126 (Counterclockwise)

Preceding gene: 78356509

Following gene: 78356501

Centisome position: 39.69

GC content: 60.08

Gene sequence:

>486_bases
ATGTTTTCTGAACATCTGAAAGACATTGCGGTATCGCTGGGCAACACCCTGACGGAACGCCGCATGACGCTGTGCACCGC
GGAATCCTGCACCGGAGGGCTTGCAGGAGCCGTCCTTACCGCCGTGGCGGGCAGTTCGCGCTGGTTCAGAGGCGGTGTCG
TAGCGTATGCCAACGACGTGAAACAGCATATTCTGGGAGTAGACGCGGCAGTGCTGCAGCAGCACGGGGCCGTCAGCGCA
CAGGTTGTGGAATCCATGGCCGCGGGTGCGTGCCGCCTGCTGCAATGTACTGCAGGCATCGCCGTTTCCGGCATTGCCGG
CCCTGACGGGGGCACCCCGCAGAAACCGGTGGGCACAGTATGGATAGGCTGGCACTGTCAGCAAAAAACAACAAGCCGCG
TATTTCTGTTTTCCGGCAACCGCGACGCGGTAAGGCTGCAGACAGTGGAACAAGGCCTTCTGGGGCTTATGGAAATGCTG
AAATGA

Upstream 100 bases:

>100_bases
CGCTCTGTATGCTACCCGCCCGGGCCGGCGGTGGCAACCGCTGCAGCAGCCGTTGCCGGCATACCGGCCATATGCTACTG
CGGCATTACAAGGAGCCGGT

Downstream 100 bases:

>100_bases
CCGCACCGGAAATAACAGAAAAATGTCCGGCTGTATCTTTACACAACCGGACACCGTAAACCGTTCTTCAGCCGTGGCTC
ATGCGATGCGGCTCCGCCTG

Product: CinA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MFSEHLKDIAVSLGNTLTERRMTLCTAESCTGGLAGAVLTAVAGSSRWFRGGVVAYANDVKQHILGVDAAVLQQHGAVSA
QVVESMAAGACRLLQCTAGIAVSGIAGPDGGTPQKPVGTVWIGWHCQQKTTSRVFLFSGNRDAVRLQTVEQGLLGLMEML
K

Sequences:

>Translated_161_residues
MFSEHLKDIAVSLGNTLTERRMTLCTAESCTGGLAGAVLTAVAGSSRWFRGGVVAYANDVKQHILGVDAAVLQQHGAVSA
QVVESMAAGACRLLQCTAGIAVSGIAGPDGGTPQKPVGTVWIGWHCQQKTTSRVFLFSGNRDAVRLQTVEQGLLGLMEML
K
>Mature_161_residues
MFSEHLKDIAVSLGNTLTERRMTLCTAESCTGGLAGAVLTAVAGSSRWFRGGVVAYANDVKQHILGVDAAVLQQHGAVSA
QVVESMAAGACRLLQCTAGIAVSGIAGPDGGTPQKPVGTVWIGWHCQQKTTSRVFLFSGNRDAVRLQTVEQGLLGLMEML
K

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=161, Percent_Identity=43.4782608695652, Blast_Score=130, Evalue=4e-32,
Organism=Escherichia coli, GI1787818, Length=142, Percent_Identity=32.3943661971831, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 16842; Mature: 16842

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSEHLKDIAVSLGNTLTERRMTLCTAESCTGGLAGAVLTAVAGSSRWFRGGVVAYANDV
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KQHILGVDAAVLQQHGAVSAQVVESMAAGACRLLQCTAGIAVSGIAGPDGGTPQKPVGTV
HHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEE
WIGWHCQQKTTSRVFLFSGNRDAVRLQTVEQGLLGLMEMLK
EEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFSEHLKDIAVSLGNTLTERRMTLCTAESCTGGLAGAVLTAVAGSSRWFRGGVVAYANDV
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KQHILGVDAAVLQQHGAVSAQVVESMAAGACRLLQCTAGIAVSGIAGPDGGTPQKPVGTV
HHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEE
WIGWHCQQKTTSRVFLFSGNRDAVRLQTVEQGLLGLMEMLK
EEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]