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The map label for this gene is 78356491

Identifier: 78356491

GI number: 78356491

Start: 1470594

End: 1471340

Strand: Reverse

Name: 78356491

Synonym: Dde_1446

Alternate gene names: NA

Gene position: 1471340-1470594 (Counterclockwise)

Preceding gene: 78356492

Following gene: 78356490

Centisome position: 39.44

GC content: 58.23

Gene sequence:

>747_bases
ATGTTTCCCATCCGCGATTCCATTCCGCGCGTCCACAAACCGTGGGCCGTATGGAGCATACTGCTGCTCAACATCGCCGT
ATTCATGCTGCAGCAGGGCATGACGGAACAGATGCTTGTGAGCTTTCTGCACCTGTACGGCGTGGTGCCCGCCCGCTTTA
CCTCACCGGAATGGGCACTTTTTGCCGGCTATCCCCGCGGGGGGTATATCGCATTTCTCACCCACATGTTCATTCACGGC
GGCTGGCTGCACATTATTGCAAACATGTGGACGCTGTGGATTTTTGCCGACAACATTGAAGACGTGATGGGACCGGTGCG
GTTTGTGCTCTTTTATCTGGCATGCGGGCTGTCAGCCACTGTCGTGCATATTCTGTTCAACGCCGATTCCACCATACCGG
TGGTCGGCGCTTCGGGCGCCATTGCCGGAGTAATGGGGGCCTATCTGCTGCTTTACCCCCATGCAAAGGTGTTCACGCTG
ATCCCCGTGCTGTTTTTTCCGCTGTTTTTCGAGCTTCCGGCCGCCATCTATCTGGGCATATGGTTTCTGACGCAGTTTTT
TTCGGGGGTCACCAGCATAGTGGCCCCTCAGCAAGGGGGCGGTATAGCATGGTGGGCGCATCTGGGCGGGTTTGCAGCCG
GTATTGTGCTGCTGCCCTACTTCCGCCGCAATGACCGCTGTTACTTCTGCTACCGGCCGGATCCAGCGCGGCGTACCGCG
GTGGTAGAACCGCCCCGCCGCGGCTGA

Upstream 100 bases:

>100_bases
CAGAACACTCTGGACTGTTCCACCCGGCGGGCGGAAGTGATAGGATACTCTTTGCGCAACATGCATACGCTGCCCGCACA
CACGGCATAACGGAGCTGCC

Downstream 100 bases:

>100_bases
CGTCTGCCTGCCCCGCACTGCGCGTAAATACACGCTCCGGTCAGCGACCGCTTTCGTTGACTTGCCCCCCCGTATGCAGC
ATAACTACGTTCCGCCGACG

Product: rhomboid family protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Transmembrane Rhomboid Family Protein; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Cytoplasmic Membrane Protein; Subfamily; Rhomboid Serine Protease; Membrane Associated Serine Protease; Rhomboid Family Membrane Protein; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFPIRDSIPRVHKPWAVWSILLLNIAVFMLQQGMTEQMLVSFLHLYGVVPARFTSPEWALFAGYPRGGYIAFLTHMFIHG
GWLHIIANMWTLWIFADNIEDVMGPVRFVLFYLACGLSATVVHILFNADSTIPVVGASGAIAGVMGAYLLLYPHAKVFTL
IPVLFFPLFFELPAAIYLGIWFLTQFFSGVTSIVAPQQGGGIAWWAHLGGFAAGIVLLPYFRRNDRCYFCYRPDPARRTA
VVEPPRRG

Sequences:

>Translated_248_residues
MFPIRDSIPRVHKPWAVWSILLLNIAVFMLQQGMTEQMLVSFLHLYGVVPARFTSPEWALFAGYPRGGYIAFLTHMFIHG
GWLHIIANMWTLWIFADNIEDVMGPVRFVLFYLACGLSATVVHILFNADSTIPVVGASGAIAGVMGAYLLLYPHAKVFTL
IPVLFFPLFFELPAAIYLGIWFLTQFFSGVTSIVAPQQGGGIAWWAHLGGFAAGIVLLPYFRRNDRCYFCYRPDPARRTA
VVEPPRRG
>Mature_248_residues
MFPIRDSIPRVHKPWAVWSILLLNIAVFMLQQGMTEQMLVSFLHLYGVVPARFTSPEWALFAGYPRGGYIAFLTHMFIHG
GWLHIIANMWTLWIFADNIEDVMGPVRFVLFYLACGLSATVVHILFNADSTIPVVGASGAIAGVMGAYLLLYPHAKVFTL
IPVLFFPLFFELPAAIYLGIWFLTQFFSGVTSIVAPQQGGGIAWWAHLGGFAAGIVLLPYFRRNDRCYFCYRPDPARRTA
VVEPPRRG

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27844; Mature: 27844

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPIRDSIPRVHKPWAVWSILLLNIAVFMLQQGMTEQMLVSFLHLYGVVPARFTSPEWAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEE
FAGYPRGGYIAFLTHMFIHGGWLHIIANMWTLWIFADNIEDVMGPVRFVLFYLACGLSAT
EECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHH
VVHILFNADSTIPVVGASGAIAGVMGAYLLLYPHAKVFTLIPVLFFPLFFELPAAIYLGI
HHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLTQFFSGVTSIVAPQQGGGIAWWAHLGGFAAGIVLLPYFRRNDRCYFCYRPDPARRTA
HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCE
VVEPPRRG
ECCCCCCC
>Mature Secondary Structure
MFPIRDSIPRVHKPWAVWSILLLNIAVFMLQQGMTEQMLVSFLHLYGVVPARFTSPEWAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEE
FAGYPRGGYIAFLTHMFIHGGWLHIIANMWTLWIFADNIEDVMGPVRFVLFYLACGLSAT
EECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHH
VVHILFNADSTIPVVGASGAIAGVMGAYLLLYPHAKVFTLIPVLFFPLFFELPAAIYLGI
HHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLTQFFSGVTSIVAPQQGGGIAWWAHLGGFAAGIVLLPYFRRNDRCYFCYRPDPARRTA
HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCE
VVEPPRRG
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA