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The map label for this gene is bepC [H]

Identifier: 78356460

GI number: 78356460

Start: 1433427

End: 1434845

Strand: Reverse

Name: bepC [H]

Synonym: Dde_1415

Alternate gene names: 78356460

Gene position: 1434845-1433427 (Counterclockwise)

Preceding gene: 78356461

Following gene: 78356457

Centisome position: 38.47

GC content: 55.04

Gene sequence:

>1419_bases
ATGGGTTATACGCTATCCGTTTTCCCTATACGTTGGAATATTATTACCAAGGGTTCTGTCATGTCACACACTTGTTCACC
ATTCTTAAGCGCCTGCAAAAATGCGGTGCTGCTTTCCGCAGCCGGAGTGTTTATGCTTTCCGGTCAAGCCTTTGCAGGAA
CTTCTTTACAGCAAAGTGTGGAAGCCACCCTGAAAAACAACCCTGTAATCAAATCATTCAAAGAAGGCGTGAGCGCCGCA
AAACATGATGTGCGCGATGCCGAAGGCGGCTGGTTTCCCCGGCTCGACTTCAATGCAGGGTACGGCGTGGAACAGGTGAA
CGATGCGCTGACCCGCACTGACGGCCGCAAGAACCACTGGGAAGAACGCAGCGACATAACCACCACGCTTTCACAGCTGC
TGTGGGACGGCGGCAAGGTGAACAGCCAGATAGGCATTCAGGAAGCGCGGCTGGCAAATGCAGACAGCCGACTGACAGAC
AACGCGGAAGTACTCGCGCTGGAAGCCATCAGAGCGCACCTTGAGCTGTACCGCCAGCGCAATCTTGTTCTGCTGGCCGA
ACAGAATGTTAAAAATCATGAAGACATTCTGAAATCGCAGGAAGAGCGTCAGAGAATGGGTGCCACAAGTCTGGCTGACG
TGTCGCAGACCAAAGGACGTCTTGCCCGTGCACAGGCATCGCTCAGCAATGCCCGGCAGGAACTGCTGGTGGCGGAAGCC
AACTACAGACGCATTGCCGGTACAGATGCTCCGGAGGTGGACTGGGCCGATAAACCGGCCGGTGTGCCCGGCACGTTTGA
TTCCGCACTGCAGCTCGCGCTGACCAGCAACCCCAAGCTGGCAGCCCAGCAGGCTGAAATTCAGGAAAATGAACAGCGCA
TTCAGCTTGCACGTTCCGAATACTACCCCACCTTTACCGCTCAGGCTTCCAACACCTACAAGGATCAGGTGGAAAGCAGC
ACCACATGGGAAGTGGACAACGCCCTGCAACTGCGCGTTTCATGGAATATTTTCCGCGGCGGATCCGATCTGGCCGCAGA
AAAAGCAGAAGGTGCCCGCAAGCGCCGTTCCATGATGGACCTGCAGAATATCAATGAAGCCCTGATGCAGGAAACCAGCG
ACACATGGAATGCTCTGGAAAACGCCCGTGAGCAGAAGCGGCTTTTCAACGAAGCAGTTGAATACAACACCCAGACCCGC
GACATGTATATCGAGCAGTTCAGCGTGGGACAGCGCAGCCTGCTGGACGTGCTGGATGCCGAAAATGAGCTCTACAGCTC
TTCCATCCAGCTGGTCACAGCCACGGTAAACGAAATCGTGGCCGAATACAGGCTGGTGGCGCTTGGCGGCAAACTGATAG
AAACAGTCGGCCTCGATCCGGCCATCTACAAACAGGAAACCGCCGAACAGAACTCCTGA

Upstream 100 bases:

>100_bases
GGCACTGATCAATCAACACAAGATAATTGACGCGTAAGAACAGCTGCGTGCTTGGCAAAATGCGCCGTGTATGCTAGCTG
TTGCAGGAGAATAAGACGAA

Downstream 100 bases:

>100_bases
TCCGGTACTTTTTCGAAGGGCCTGCAACTGCAGGCCCTTTTTTTATGTGCAAAGCTGCACTGCCGGAGATGGCTACCGGA
TGCAGACGGCCACCTGAATA

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MGYTLSVFPIRWNIITKGSVMSHTCSPFLSACKNAVLLSAAGVFMLSGQAFAGTSLQQSVEATLKNNPVIKSFKEGVSAA
KHDVRDAEGGWFPRLDFNAGYGVEQVNDALTRTDGRKNHWEERSDITTTLSQLLWDGGKVNSQIGIQEARLANADSRLTD
NAEVLALEAIRAHLELYRQRNLVLLAEQNVKNHEDILKSQEERQRMGATSLADVSQTKGRLARAQASLSNARQELLVAEA
NYRRIAGTDAPEVDWADKPAGVPGTFDSALQLALTSNPKLAAQQAEIQENEQRIQLARSEYYPTFTAQASNTYKDQVESS
TTWEVDNALQLRVSWNIFRGGSDLAAEKAEGARKRRSMMDLQNINEALMQETSDTWNALENAREQKRLFNEAVEYNTQTR
DMYIEQFSVGQRSLLDVLDAENELYSSSIQLVTATVNEIVAEYRLVALGGKLIETVGLDPAIYKQETAEQNS

Sequences:

>Translated_472_residues
MGYTLSVFPIRWNIITKGSVMSHTCSPFLSACKNAVLLSAAGVFMLSGQAFAGTSLQQSVEATLKNNPVIKSFKEGVSAA
KHDVRDAEGGWFPRLDFNAGYGVEQVNDALTRTDGRKNHWEERSDITTTLSQLLWDGGKVNSQIGIQEARLANADSRLTD
NAEVLALEAIRAHLELYRQRNLVLLAEQNVKNHEDILKSQEERQRMGATSLADVSQTKGRLARAQASLSNARQELLVAEA
NYRRIAGTDAPEVDWADKPAGVPGTFDSALQLALTSNPKLAAQQAEIQENEQRIQLARSEYYPTFTAQASNTYKDQVESS
TTWEVDNALQLRVSWNIFRGGSDLAAEKAEGARKRRSMMDLQNINEALMQETSDTWNALENAREQKRLFNEAVEYNTQTR
DMYIEQFSVGQRSLLDVLDAENELYSSSIQLVTATVNEIVAEYRLVALGGKLIETVGLDPAIYKQETAEQNS
>Mature_471_residues
GYTLSVFPIRWNIITKGSVMSHTCSPFLSACKNAVLLSAAGVFMLSGQAFAGTSLQQSVEATLKNNPVIKSFKEGVSAAK
HDVRDAEGGWFPRLDFNAGYGVEQVNDALTRTDGRKNHWEERSDITTTLSQLLWDGGKVNSQIGIQEARLANADSRLTDN
AEVLALEAIRAHLELYRQRNLVLLAEQNVKNHEDILKSQEERQRMGATSLADVSQTKGRLARAQASLSNARQELLVAEAN
YRRIAGTDAPEVDWADKPAGVPGTFDSALQLALTSNPKLAAQQAEIQENEQRIQLARSEYYPTFTAQASNTYKDQVESST
TWEVDNALQLRVSWNIFRGGSDLAAEKAEGARKRRSMMDLQNINEALMQETSDTWNALENAREQKRLFNEAVEYNTQTRD
MYIEQFSVGQRSLLDVLDAENELYSSSIQLVTATVNEIVAEYRLVALGGKLIETVGLDPAIYKQETAEQNS

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52389; Mature: 52258

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYTLSVFPIRWNIITKGSVMSHTCSPFLSACKNAVLLSAAGVFMLSGQAFAGTSLQQSV
CCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHH
EATLKNNPVIKSFKEGVSAAKHDVRDAEGGWFPRLDFNAGYGVEQVNDALTRTDGRKNHW
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCC
EERSDITTTLSQLLWDGGKVNSQIGIQEARLANADSRLTDNAEVLALEAIRAHLELYRQR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NLVLLAEQNVKNHEDILKSQEERQRMGATSLADVSQTKGRLARAQASLSNARQELLVAEA
CEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYRRIAGTDAPEVDWADKPAGVPGTFDSALQLALTSNPKLAAQQAEIQENEQRIQLARSE
CCCEECCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YYPTFTAQASNTYKDQVESSTTWEVDNALQLRVSWNIFRGGSDLAAEKAEGARKRRSMMD
CCCCEECCCCCCHHHHHCCCCCEEECCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
LQNINEALMQETSDTWNALENAREQKRLFNEAVEYNTQTRDMYIEQFSVGQRSLLDVLDA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHC
ENELYSSSIQLVTATVNEIVAEYRLVALGGKLIETVGLDPAIYKQETAEQNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
GYTLSVFPIRWNIITKGSVMSHTCSPFLSACKNAVLLSAAGVFMLSGQAFAGTSLQQSV
CCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHH
EATLKNNPVIKSFKEGVSAAKHDVRDAEGGWFPRLDFNAGYGVEQVNDALTRTDGRKNHW
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCC
EERSDITTTLSQLLWDGGKVNSQIGIQEARLANADSRLTDNAEVLALEAIRAHLELYRQR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NLVLLAEQNVKNHEDILKSQEERQRMGATSLADVSQTKGRLARAQASLSNARQELLVAEA
CEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYRRIAGTDAPEVDWADKPAGVPGTFDSALQLALTSNPKLAAQQAEIQENEQRIQLARSE
CCCEECCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YYPTFTAQASNTYKDQVESSTTWEVDNALQLRVSWNIFRGGSDLAAEKAEGARKRRSMMD
CCCCEECCCCCCHHHHHCCCCCEEECCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
LQNINEALMQETSDTWNALENAREQKRLFNEAVEYNTQTRDMYIEQFSVGQRSLLDVLDA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHC
ENELYSSSIQLVTATVNEIVAEYRLVALGGKLIETVGLDPAIYKQETAEQNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]