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The map label for this gene is 78356418

Identifier: 78356418

GI number: 78356418

Start: 1391776

End: 1392309

Strand: Direct

Name: 78356418

Synonym: Dde_1371

Alternate gene names: NA

Gene position: 1391776-1392309 (Clockwise)

Preceding gene: 78356417

Following gene: 78356419

Centisome position: 37.31

GC content: 50.94

Gene sequence:

>534_bases
ATGCGTAAAATTCTGCTTGCGATCATCGCACTTTCCCTTTTTGCCGCCGCTCCCGCACAGGCAGCCGGTCCCCAGAAAAT
CGGTCTGATCAACCTTAAAAAGCTGATGCTTGAAAGCGAACCGGCTGCCGAAGCCAAGAAAAAAATGGAAGAAAGCTTTT
CTGCTGAAAAGAAAGAAATCGATAAAAAATCTGAAGAGCTGAAAAAAATGTCCGAGCAGCTGCGTCTGCAGGCTGCTGCC
CTCACGCCCGAAGCCCGCGAAGATAAAAAGGTGGAATTTGTGCGTCTGAAGCGTGATCTTGAAGATCAGGCCCGCACCTT
TACCCGCAAAGTGCAGTCTGCCGATGCCCAGATTCGTCAGGACATTCTGACCATCATTGCCAAAGCCTGCAATGAATACG
GCAAAAAGAACAATATGGCTGCTATTTACGATGCCACCAATGCCGGTGTGGTGTACGCCAACCCCGAACTGGACGTAACC
GCCGAGGTGATGGTTGAAGTGAACCGCATCTGGCGCGCCGGTGCCAAAAAGTAG

Upstream 100 bases:

>100_bases
GCGGTATTCCACTTAATCTTTAACCCCAGAACAGCATGAAGTGTCACAGGGTTCAACCCTGTGTATTCGTTGCCAATAAA
AGACTCACAGGAGAGCTTTA

Downstream 100 bases:

>100_bases
TAAGACGGGCACATGCAGAAAACCGTCATGAAGGTTTCGGATATAGCCGGAGCACTGGGGCTGAAGCTCAAAGGTCCGGA
CCGCGAAATTTCGGGTGTGA

Product: outer membrane protein OmpH

Products: NA

Alternate protein names: Outer Membrane Protein OmpH; Outer Membrane Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRKILLAIIALSLFAAAPAQAAGPQKIGLINLKKLMLESEPAAEAKKKMEESFSAEKKEIDKKSEELKKMSEQLRLQAAA
LTPEAREDKKVEFVRLKRDLEDQARTFTRKVQSADAQIRQDILTIIAKACNEYGKKNNMAAIYDATNAGVVYANPELDVT
AEVMVEVNRIWRAGAKK

Sequences:

>Translated_177_residues
MRKILLAIIALSLFAAAPAQAAGPQKIGLINLKKLMLESEPAAEAKKKMEESFSAEKKEIDKKSEELKKMSEQLRLQAAA
LTPEAREDKKVEFVRLKRDLEDQARTFTRKVQSADAQIRQDILTIIAKACNEYGKKNNMAAIYDATNAGVVYANPELDVT
AEVMVEVNRIWRAGAKK
>Mature_177_residues
MRKILLAIIALSLFAAAPAQAAGPQKIGLINLKKLMLESEPAAEAKKKMEESFSAEKKEIDKKSEELKKMSEQLRLQAAA
LTPEAREDKKVEFVRLKRDLEDQARTFTRKVQSADAQIRQDILTIIAKACNEYGKKNNMAAIYDATNAGVVYANPELDVT
AEVMVEVNRIWRAGAKK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19732; Mature: 19732

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILLAIIALSLFAAAPAQAAGPQKIGLINLKKLMLESEPAAEAKKKMEESFSAEKKEI
CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DKKSEELKKMSEQLRLQAAALTPEAREDKKVEFVRLKRDLEDQARTFTRKVQSADAQIRQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILTIIAKACNEYGKKNNMAAIYDATNAGVVYANPELDVTAEVMVEVNRIWRAGAKK
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRKILLAIIALSLFAAAPAQAAGPQKIGLINLKKLMLESEPAAEAKKKMEESFSAEKKEI
CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DKKSEELKKMSEQLRLQAAALTPEAREDKKVEFVRLKRDLEDQARTFTRKVQSADAQIRQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILTIIAKACNEYGKKNNMAAIYDATNAGVVYANPELDVTAEVMVEVNRIWRAGAKK
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA