| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356361
Identifier: 78356361
GI number: 78356361
Start: 1333631
End: 1334053
Strand: Reverse
Name: 78356361
Synonym: Dde_1314
Alternate gene names: NA
Gene position: 1334053-1333631 (Counterclockwise)
Preceding gene: 78356362
Following gene: 78356359
Centisome position: 35.76
GC content: 54.61
Gene sequence:
>423_bases ATGCCGCAGGTAGCCGCCAGAATTTCCGGCGATCAGGAAAAGTGGCTCAAAGATTATTTCCGCACCAAAAGTGCGGGAGC CGAATTCATTCTGCCGTGGGCAGTGGATACCTTTTTCCGCGCCATATCCAGCATCAAGGATCAATTTACCGCTCCTGAGC TGAAAACCATAGTCGAAGCGCATAAAGACATCAGGCTCATGCCGGAACAGACGCGGCTTGATTATCTGCTGTTGCGCGTG CAGGACGCCTGCGAACTGAACCTGCTGCACACCAGACACGGAGCGGGCAAAGCATCGCTGGAAGCCAAACTGCGCCGCCT GGACGATACGCAGGCCGCCGCGCTTTCCGTATGGGCTGCCGCTTTCTGGGTAAGCAAGAACTGCACAGCAGAAAATCTGG ACGCATACATAAGAAACTACTGA
Upstream 100 bases:
>100_bases TCTTGAACTCTGGCTCCGGGCAAGGTATGTTTTCCGATATTGTCCTAAAATCCGGAACGCCCCACCGGACAAGCGTTTGC GCACAGCGCAGGGGGAAGCC
Downstream 100 bases:
>100_bases CCCGCCCTGTACAGTCCGCTGCGGACCTTACAGCCCCGCACAATCATCCCCGCCGGCAATAAAAAAGGCGGGCTGTCACG CCCGCCGTCATACAAGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPQVAARISGDQEKWLKDYFRTKSAGAEFILPWAVDTFFRAISSIKDQFTAPELKTIVEAHKDIRLMPEQTRLDYLLLRV QDACELNLLHTRHGAGKASLEAKLRRLDDTQAAALSVWAAAFWVSKNCTAENLDAYIRNY
Sequences:
>Translated_140_residues MPQVAARISGDQEKWLKDYFRTKSAGAEFILPWAVDTFFRAISSIKDQFTAPELKTIVEAHKDIRLMPEQTRLDYLLLRV QDACELNLLHTRHGAGKASLEAKLRRLDDTQAAALSVWAAAFWVSKNCTAENLDAYIRNY >Mature_139_residues PQVAARISGDQEKWLKDYFRTKSAGAEFILPWAVDTFFRAISSIKDQFTAPELKTIVEAHKDIRLMPEQTRLDYLLLRVQ DACELNLLHTRHGAGKASLEAKLRRLDDTQAAALSVWAAAFWVSKNCTAENLDAYIRNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15957; Mature: 15826
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQVAARISGDQEKWLKDYFRTKSAGAEFILPWAVDTFFRAISSIKDQFTAPELKTIVEA CCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HKDIRLMPEQTRLDYLLLRVQDACELNLLHTRHGAGKASLEAKLRRLDDTQAAALSVWAA HHCCCCCCCHHHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH AFWVSKNCTAENLDAYIRNY HHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure PQVAARISGDQEKWLKDYFRTKSAGAEFILPWAVDTFFRAISSIKDQFTAPELKTIVEA CCCHHHCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HKDIRLMPEQTRLDYLLLRVQDACELNLLHTRHGAGKASLEAKLRRLDDTQAAALSVWAA HHCCCCCCCHHHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH AFWVSKNCTAENLDAYIRNY HHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA