| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356357
Identifier: 78356357
GI number: 78356357
Start: 1328744
End: 1329565
Strand: Direct
Name: 78356357
Synonym: Dde_1310
Alternate gene names: NA
Gene position: 1328744-1329565 (Clockwise)
Preceding gene: 78356356
Following gene: 78356358
Centisome position: 35.62
GC content: 59.0
Gene sequence:
>822_bases ATGAACCGCGTAATTGCCATGCTGATTCTTGGCGTGCTGCTTACCGCCATGGTGCTGATCGTGGCTAACTACATGTCGCG TCCTGATGTGCCGGCCAACTATGCACAGGAAGAAACCGTGCCTTCCGTGGCTGTGCCTGCCCCGCAGGACGGCAACGCCA CTCAGCCGGAAAACGTTGATCTGCGCAGCATGCTGCAAAAGCCTGCCGCCGTGCCCGAAGATCTGCCCGAAACCGTGGAC GGCGGGCTGCCTCAGCCCGAACCTGTGGCTCCGGGAGCGGCAACCCCCGGAAGCGGCGAAAATGCGAGCGTGCCCGCTCC GCCGGCGGTTGACCTGAACGCCGTGCGCGCCGCGGCGCCGCAGAAAGACACCGCACAGGATGACGTTGCCGCTGTGTCCG GCGGCAGTGAAGAACCGGTGAAACAGGCTCAGCCTGCCGCACCTTCCGTGGCGGAAAAAACTCAGCCTGCGGCTGCCGCG CCTGTCGTTAAAAAAGAACCCTCCGTGCGCAAAACCGGAGCCATAACAATGGAGGCATCCGGTTTCCGCTTCGACGGCAG CAAGCTTATTTTTTATGTCAGAGGGTCGCGTCCGTTCGAGCATTCGGTGTTTACGCTGAGCAAGCCCGACAGGCTGGTTG TGGATGTGAAGGGGGCGTGGACAAAGGTCAGCACGCCGCAGACACCTTCCAACCGCCTTGTGAAAAACACCCGCTCCGGC GTGTACAAAGATCACGTCAGATTTGTTCTTGATCTTAAAGCTCCTCTTGTGTCGCATACTGCAAAAATGCAGGGTAATGA GCTTGTGATCATAATGAATTGA
Upstream 100 bases:
>100_bases CGATGAATCCGCAGCTTGAAGCGTCGAAGCGCTTCAAAGAGTATATTCTTAACCATGAGAAACATGGCCGCTAGCGCCAT GAGACCACCGGAGTGAATAC
Downstream 100 bases:
>100_bases TGTTCTGAAAGCCTATATACTGTTTTTTCTGTTCAAGCGTCCTCAGCCTGCAGGCTGAGGACGCTTGTTTTGTGGTGTGC AAGAGAATGTGCTGTTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVDLRSMLQKPAAVPEDLPETVD GGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAPQKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAA PVVKKEPSVRKTGAITMEASGFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN
Sequences:
>Translated_273_residues MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVDLRSMLQKPAAVPEDLPETVD GGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAPQKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAA PVVKKEPSVRKTGAITMEASGFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN >Mature_273_residues MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVDLRSMLQKPAAVPEDLPETVD GGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAPQKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAA PVVKKEPSVRKTGAITMEASGFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28781; Mature: 28781
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCC LRSMLQKPAAVPEDLPETVDGGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAP HHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC QKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAAPVVKKEPSVRKTGAITMEAS CCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCEEEEECC GFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG CEEECCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCC VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN HHHHHHEEEEEHHCHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCC LRSMLQKPAAVPEDLPETVDGGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAP HHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC QKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAAPVVKKEPSVRKTGAITMEAS CCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCEEEEECC GFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG CEEECCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCC VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN HHHHHHEEEEEHHCHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA