| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mrp [C]
Identifier: 78356353
GI number: 78356353
Start: 1325425
End: 1326630
Strand: Reverse
Name: mrp [C]
Synonym: Dde_1306
Alternate gene names: 78356353
Gene position: 1326630-1325425 (Counterclockwise)
Preceding gene: 78356354
Following gene: 78356351
Centisome position: 35.56
GC content: 63.1
Gene sequence:
>1206_bases ATGAGTAATACCGGCTGCGGGCAGACCGCAGGAGCACAGGCACAGGGTCTGCAGGAACTGAACCCCGAAGAAATGCGCCT GCAGCGTACATTGAAACGCATCCGCCACAAAGTCGTGGTCATGTCGGGCAAGGGCGGCGTGGGCAAGTCCACATTTGCCG TCAATCTGGCGGCAGGGCTTGCGCTGGCGGGCAAACGCGTGGGCCTTATAGACGTCGATGTCCACGGTCCCAGCGTGCCC CGCCTGCTCGGCCTGCACAATGCCCGCGTCACCATTGAAAACGACTATATCGAGCCTGTCCGCTGGAGTGCCGGTCTTTC CGTCATGTCGCTGGGCTTTCTGCTGCCCGACATGGATCAGGCAGTTGTCTGGCGCGGCCCCGTAAAAATGGGATTTATCA GGCAACTGCTGGCCGACGTGGTGTGGGGCGACCTTGACTATCTGATCGCCGACTGCCCCCCCGGCACCGGAGATGAACCG CTTTCGGTGCTGCAACTGCTCGGTGCCGACGCACAGGGCCTTATTGTCACCACGCCGCAGGCTGTCGCCGTTGACGACGT ACGCCGCTCCATATCGTTCTGCCGGGATCTGGGCAATCCAGTACTGGGACTGGTAGAAAACATGAGCGGCATAGCCTGCC CGCAGTGCGGCCATCTGGAGGCGCTGTTCGGCAAAGGCGGAGGAAAAGACCTGGCAGAAGAAACAGGCGTGCCTTTTCTT GGCGCCGTCCCGCTGGACCCTCAGGTTGTGCGGTCCGGTGACAAGGGGCTGGTGTTTGTGCAGGCCCGCCCTGAAGCAGC AGCGGCGCAGGCTGTCATGCATGTGGTGCAGACAGTGCTTGCCCTTTCGGAAAACGACAGGCCGCAGGCACCATCACTGC ACGGGCCGGTCACCGTGGCTGTCACTGCCGCCGGAGGCACGCTGTGCCGCCACGCCGGTTACTGCGAAGAAATTATTCTG GCGCAGGCTGACGGTAAAAGCAGGCAGGTGCAAGAGGTACGCACCGTTCCTGCACCCGCAGACTCGACCACTTTGCCGGA GTGGCTCGCCGGGCAGGGAGTCAACGTGCTCATCACCGGCGGGCTTTCCGCCGAGATGGAAAACCGCCTGCGCCGCGAAG GCATCACATGGGTTACGGGTGCTCCCGACTGCCCGCCGCAGGAGGCAGTCAGCGCATGGCTTGAGGGCCGGCTGACAGCG GGCTGA
Upstream 100 bases:
>100_bases TTTTCCGTATATGCACCGGCCCGCAACGCACCGCGCTGCGGGCTTTTTTTCGGGCAGCACATTCCGCCGCGCCACAACTT TTTTCAGGAAGCATAAAGCC
Downstream 100 bases:
>100_bases CCGTTCGGCCACCGTTCGGCCACCGGCCGGAGCATGCGCGGCAGCAGCGCAGCCCCAGACGGACACGCCGCTACCCGTCA CAGCCAGTTCACAGCCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSNTGCGQTAGAQAQGLQELNPEEMRLQRTLKRIRHKVVVMSGKGGVGKSTFAVNLAAGLALAGKRVGLIDVDVHGPSVP RLLGLHNARVTIENDYIEPVRWSAGLSVMSLGFLLPDMDQAVVWRGPVKMGFIRQLLADVVWGDLDYLIADCPPGTGDEP LSVLQLLGADAQGLIVTTPQAVAVDDVRRSISFCRDLGNPVLGLVENMSGIACPQCGHLEALFGKGGGKDLAEETGVPFL GAVPLDPQVVRSGDKGLVFVQARPEAAAAQAVMHVVQTVLALSENDRPQAPSLHGPVTVAVTAAGGTLCRHAGYCEEIIL AQADGKSRQVQEVRTVPAPADSTTLPEWLAGQGVNVLITGGLSAEMENRLRREGITWVTGAPDCPPQEAVSAWLEGRLTA G
Sequences:
>Translated_401_residues MSNTGCGQTAGAQAQGLQELNPEEMRLQRTLKRIRHKVVVMSGKGGVGKSTFAVNLAAGLALAGKRVGLIDVDVHGPSVP RLLGLHNARVTIENDYIEPVRWSAGLSVMSLGFLLPDMDQAVVWRGPVKMGFIRQLLADVVWGDLDYLIADCPPGTGDEP LSVLQLLGADAQGLIVTTPQAVAVDDVRRSISFCRDLGNPVLGLVENMSGIACPQCGHLEALFGKGGGKDLAEETGVPFL GAVPLDPQVVRSGDKGLVFVQARPEAAAAQAVMHVVQTVLALSENDRPQAPSLHGPVTVAVTAAGGTLCRHAGYCEEIIL AQADGKSRQVQEVRTVPAPADSTTLPEWLAGQGVNVLITGGLSAEMENRLRREGITWVTGAPDCPPQEAVSAWLEGRLTA G >Mature_400_residues SNTGCGQTAGAQAQGLQELNPEEMRLQRTLKRIRHKVVVMSGKGGVGKSTFAVNLAAGLALAGKRVGLIDVDVHGPSVPR LLGLHNARVTIENDYIEPVRWSAGLSVMSLGFLLPDMDQAVVWRGPVKMGFIRQLLADVVWGDLDYLIADCPPGTGDEPL SVLQLLGADAQGLIVTTPQAVAVDDVRRSISFCRDLGNPVLGLVENMSGIACPQCGHLEALFGKGGGKDLAEETGVPFLG AVPLDPQVVRSGDKGLVFVQARPEAAAAQAVMHVVQTVLALSENDRPQAPSLHGPVTVAVTAAGGTLCRHAGYCEEIILA QADGKSRQVQEVRTVPAPADSTTLPEWLAGQGVNVLITGGLSAEMENRLRREGITWVTGAPDCPPQEAVSAWLEGRLTAG
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI6912540, Length=259, Percent_Identity=48.6486486486487, Blast_Score=241, Evalue=6e-64, Organism=Homo sapiens, GI118572611, Length=259, Percent_Identity=45.1737451737452, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI157384956, Length=282, Percent_Identity=40.0709219858156, Blast_Score=184, Evalue=2e-46, Organism=Escherichia coli, GI87082045, Length=247, Percent_Identity=43.3198380566802, Blast_Score=186, Evalue=2e-48, Organism=Caenorhabditis elegans, GI25143050, Length=262, Percent_Identity=41.6030534351145, Blast_Score=218, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6322188, Length=228, Percent_Identity=45.1754385964912, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6321347, Length=265, Percent_Identity=44.1509433962264, Blast_Score=218, Evalue=1e-57, Organism=Drosophila melanogaster, GI24667611, Length=251, Percent_Identity=45.4183266932271, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI19921440, Length=245, Percent_Identity=41.6326530612245, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI221511043, Length=251, Percent_Identity=36.2549800796813, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 42136; Mature: 42005
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTGCGQTAGAQAQGLQELNPEEMRLQRTLKRIRHKVVVMSGKGGVGKSTFAVNLAAGL CCCCCCCCCCCCHHHCHHHCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEHHHHH ALAGKRVGLIDVDVHGPSVPRLLGLHNARVTIENDYIEPVRWSAGLSVMSLGFLLPDMDQ HHCCCEEEEEEEECCCCCCCHHHCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHCCCCCC AVVWRGPVKMGFIRQLLADVVWGDLDYLIADCPPGTGDEPLSVLQLLGADAQGLIVTTPQ EEEEECCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHCCCCCCEEEECCC AVAVDDVRRSISFCRDLGNPVLGLVENMSGIACPQCGHLEALFGKGGGKDLAEETGVPFL HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCEE GAVPLDPQVVRSGDKGLVFVQARPEAAAAQAVMHVVQTVLALSENDRPQAPSLHGPVTVA ECCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE VTAAGGTLCRHAGYCEEIILAQADGKSRQVQEVRTVPAPADSTTLPEWLAGQGVNVLITG EEECCCHHHHHCCCHHHEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC GLSAEMENRLRREGITWVTGAPDCPPQEAVSAWLEGRLTAG CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SNTGCGQTAGAQAQGLQELNPEEMRLQRTLKRIRHKVVVMSGKGGVGKSTFAVNLAAGL CCCCCCCCCCCHHHCHHHCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEHHHHH ALAGKRVGLIDVDVHGPSVPRLLGLHNARVTIENDYIEPVRWSAGLSVMSLGFLLPDMDQ HHCCCEEEEEEEECCCCCCCHHHCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHCCCCCC AVVWRGPVKMGFIRQLLADVVWGDLDYLIADCPPGTGDEPLSVLQLLGADAQGLIVTTPQ EEEEECCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHCCCCCCEEEECCC AVAVDDVRRSISFCRDLGNPVLGLVENMSGIACPQCGHLEALFGKGGGKDLAEETGVPFL HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCEE GAVPLDPQVVRSGDKGLVFVQARPEAAAAQAVMHVVQTVLALSENDRPQAPSLHGPVTVA ECCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE VTAAGGTLCRHAGYCEEIILAQADGKSRQVQEVRTVPAPADSTTLPEWLAGQGVNVLITG EEECCCHHHHHCCCHHHEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC GLSAEMENRLRREGITWVTGAPDCPPQEAVSAWLEGRLTAG CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]