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The map label for this gene is ygeY [H]

Identifier: 78356314

GI number: 78356314

Start: 1282167

End: 1283351

Strand: Direct

Name: ygeY [H]

Synonym: Dde_1267

Alternate gene names: 78356314

Gene position: 1282167-1283351 (Clockwise)

Preceding gene: 78356313

Following gene: 78356315

Centisome position: 34.37

GC content: 59.92

Gene sequence:

>1185_bases
GTGTTGAATGAACAAGTGAAGAAAAGCGTTGTGGACCTGTGCGCTGCCGTTATCCGGCAGCCCAGCGTCTCGGGCGAGGA
AGCCGGTGTCGTTTCCGAACTCAAGGCCTTCATGGAGTCGAGCGGGTTTGATTCGGTGACTGTCGACCGTTACGGCAGCA
TCATCGGTTGTGTGAAAGGCAACCGCCCCGGCCCCAGAATTCTGTTTGACGGCCATATAGACACTGTGCCTGTGGATGCC
GCACGCTGGACCAGAGATCCTTTCGGCGCCCAGATCGAAAACGGCCGCATGTACGGCCGCGGCACGTCGGACATGAAAGG
CGCCGTGGCAGCCATGGCCGTGGCGGCAGCTGAAATGGCAAAGCCGGAAAACCGTGATTTCGCCGGTGAGATTTATGTGG
CCGGCGTGGTGCACGAAGAATGCTTTGAAGGGGTGGCCGCACGCGAAATCAGCAGTGCCGTCAAGCCCGATTATGTGGTC
ATCGGCGAAGCATCGCAGCTGAATCTGAAAATAGCCCAGCGCGGCCGGGCTGAAATTGTATTGCAGACAGAGGGCAAACC
CGCGCACTCCGCATCGCCCGATGAAGGCATAAACGCCGTGCACAAAATGATGAAGCTGGTGGCCTGCGTGGAAGCGCTGA
CCCCGCCCGAACAGGAAGTGCTGGGCAAAGGTACCAACGCCCTTACCGACATCAAGTCGTCTCCGTACCCCGGCGCCTCG
GTGGTGCCTTCCGGCTGCCGCGTGACCTACGACCGGCGCCTGCTGGTGGGAGAAACCAAAGAGTCCATTCTGCAGCCCAT
CCGCGACATCATTGCCCGGTTGCAGGCCGAAGATTCAGCTTTCAAGGCAACTGTGGGGCTGGCTGAAGATCAGGCCCCCT
GCCACACCGGCGAAACCATCCGCGCCGAGCGGTTTTTCCCCGCATGGCGTTACGAAGAGTCCGAAGAGTTTGTCCGGCAG
GTTCTGGGCGGTCTGCGTGCAGCCGGTCTTGACCCGCAGATAGACCACTATGCCTTCTGCACCAACGGCAGTCACTATGC
CGGCGAGGCAGGTATCAGAACCTTCGGCTTCGGTCCCTCGCTCGAAACTCTGGCACACACCGATGATGAGTACATCGAGC
TTGATCAACTCTACAAGGCTGTTGCCGGCTACATGGCCATCAGCCGAGCCCTGCTGCAGGCCTAG

Upstream 100 bases:

>100_bases
GCTGGTCATCAGCACCGAAGGCGACACCGACCCTGTGATGTACCGCAAGATTGTCTGGCAGGGCGCCTACCCTGAAATTG
AAGGATAAAAAGGTATCACC

Downstream 100 bases:

>100_bases
AAGAGGAGTCACCTGCCATGACGAGCACATTCTATGTTATTCTGGCCTATATGGCGTGCATGATCGGAATCGGCCTGTGG
GTCGCCAAACGCAAAATCCG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MLNEQVKKSVVDLCAAVIRQPSVSGEEAGVVSELKAFMESSGFDSVTVDRYGSIIGCVKGNRPGPRILFDGHIDTVPVDA
ARWTRDPFGAQIENGRMYGRGTSDMKGAVAAMAVAAAEMAKPENRDFAGEIYVAGVVHEECFEGVAAREISSAVKPDYVV
IGEASQLNLKIAQRGRAEIVLQTEGKPAHSASPDEGINAVHKMMKLVACVEALTPPEQEVLGKGTNALTDIKSSPYPGAS
VVPSGCRVTYDRRLLVGETKESILQPIRDIIARLQAEDSAFKATVGLAEDQAPCHTGETIRAERFFPAWRYEESEEFVRQ
VLGGLRAAGLDPQIDHYAFCTNGSHYAGEAGIRTFGFGPSLETLAHTDDEYIELDQLYKAVAGYMAISRALLQA

Sequences:

>Translated_394_residues
MLNEQVKKSVVDLCAAVIRQPSVSGEEAGVVSELKAFMESSGFDSVTVDRYGSIIGCVKGNRPGPRILFDGHIDTVPVDA
ARWTRDPFGAQIENGRMYGRGTSDMKGAVAAMAVAAAEMAKPENRDFAGEIYVAGVVHEECFEGVAAREISSAVKPDYVV
IGEASQLNLKIAQRGRAEIVLQTEGKPAHSASPDEGINAVHKMMKLVACVEALTPPEQEVLGKGTNALTDIKSSPYPGAS
VVPSGCRVTYDRRLLVGETKESILQPIRDIIARLQAEDSAFKATVGLAEDQAPCHTGETIRAERFFPAWRYEESEEFVRQ
VLGGLRAAGLDPQIDHYAFCTNGSHYAGEAGIRTFGFGPSLETLAHTDDEYIELDQLYKAVAGYMAISRALLQA
>Mature_394_residues
MLNEQVKKSVVDLCAAVIRQPSVSGEEAGVVSELKAFMESSGFDSVTVDRYGSIIGCVKGNRPGPRILFDGHIDTVPVDA
ARWTRDPFGAQIENGRMYGRGTSDMKGAVAAMAVAAAEMAKPENRDFAGEIYVAGVVHEECFEGVAAREISSAVKPDYVV
IGEASQLNLKIAQRGRAEIVLQTEGKPAHSASPDEGINAVHKMMKLVACVEALTPPEQEVLGKGTNALTDIKSSPYPGAS
VVPSGCRVTYDRRLLVGETKESILQPIRDIIARLQAEDSAFKATVGLAEDQAPCHTGETIRAERFFPAWRYEESEEFVRQ
VLGGLRAAGLDPQIDHYAFCTNGSHYAGEAGIRTFGFGPSLETLAHTDDEYIELDQLYKAVAGYMAISRALLQA

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1789236, Length=379, Percent_Identity=33.509234828496, Blast_Score=177, Evalue=9e-46,
Organism=Escherichia coli, GI1790395, Length=222, Percent_Identity=27.9279279279279, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1788816, Length=206, Percent_Identity=31.0679611650485, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17551016, Length=383, Percent_Identity=22.7154046997389, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR017706
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42454; Mature: 42454

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEQVKKSVVDLCAAVIRQPSVSGEEAGVVSELKAFMESSGFDSVTVDRYGSIIGCVKG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCEEEEECC
NRPGPRILFDGHIDTVPVDAARWTRDPFGAQIENGRMYGRGTSDMKGAVAAMAVAAAEMA
CCCCCEEEECCCCCCCCCCHHHHCCCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHHHC
KPENRDFAGEIYVAGVVHEECFEGVAAREISSAVKPDYVVIGEASQLNLKIAQRGRAEIV
CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEE
LQTEGKPAHSASPDEGINAVHKMMKLVACVEALTPPEQEVLGKGTNALTDIKSSPYPGAS
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCCCC
VVPSGCRVTYDRRLLVGETKESILQPIRDIIARLQAEDSAFKATVGLAEDQAPCHTGETI
CCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCC
RAERFFPAWRYEESEEFVRQVLGGLRAAGLDPQIDHYAFCTNGSHYAGEAGIRTFGFGPS
CHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCC
LETLAHTDDEYIELDQLYKAVAGYMAISRALLQA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNEQVKKSVVDLCAAVIRQPSVSGEEAGVVSELKAFMESSGFDSVTVDRYGSIIGCVKG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCEEEEECC
NRPGPRILFDGHIDTVPVDAARWTRDPFGAQIENGRMYGRGTSDMKGAVAAMAVAAAEMA
CCCCCEEEECCCCCCCCCCHHHHCCCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHHHC
KPENRDFAGEIYVAGVVHEECFEGVAAREISSAVKPDYVVIGEASQLNLKIAQRGRAEIV
CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEE
LQTEGKPAHSASPDEGINAVHKMMKLVACVEALTPPEQEVLGKGTNALTDIKSSPYPGAS
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCCCC
VVPSGCRVTYDRRLLVGETKESILQPIRDIIARLQAEDSAFKATVGLAEDQAPCHTGETI
CCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCC
RAERFFPAWRYEESEEFVRQVLGGLRAAGLDPQIDHYAFCTNGSHYAGEAGIRTFGFGPS
CHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCC
LETLAHTDDEYIELDQLYKAVAGYMAISRALLQA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]