| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356293
Identifier: 78356293
GI number: 78356293
Start: 1260751
End: 1261512
Strand: Direct
Name: 78356293
Synonym: Dde_1246
Alternate gene names: NA
Gene position: 1260751-1261512 (Clockwise)
Preceding gene: 78356292
Following gene: 78356296
Centisome position: 33.8
GC content: 51.97
Gene sequence:
>762_bases GTGCAGAATAAATACGGCGCACTGGCCGCCATGGTGTATCACGCAGACAAGCCCGTGGGCCGCTCGTTCGGCGATGTCGA GTTTTACCTTGAGCGTCTTGACGGTGTTTGCGGGCCTGTTCTGGAGCCTGCTGTCGGTAATGGACGGTTTCTGATTCCGT TGCTTGAAGCCGGCCACACAGTCTACGGGTTCGATGCCTCTTCTCATATGCTGGATATCTGCAAGCAGGAGATTTCAATC AGAAATCTGGCTGATAATGTCAGCATGCAACGCTTTGATGATTTTTGCTATAGTGAGAAGTTTTCTGCCGCCGTGATACC CGCGGGGTCCATTCAGTTAATTACCTCGCCGGATGAATGCCTGATGTTCCTCAAGCGTCTGAAGGGGGGCCTGTCATCGT CCGGCAAAGTGATCATTGATACGGATTCACTGGCCTGCATGGTAGACCCGGGGCCTGAAACGCGGATGTGGAATCTCGGT GATGAGATACTGACTTTGACAGAGTCGAGAGTGCGGACAAACTACCTGCATCAGACCACGGTTTCTCTGTTGAAATATGA GCACTGGAGATCAGGGCAGCTGGTATCTTCCGAGATGGACGTTTTCATGCTCCGCTTCTGGGGTGTTTTCGAGTTTCAAA GTTTGTTGATTCAGGCGGGGTTCAAGAACATATCCGTCACGCTTGACTACGGAACCCCTTTTCTGCGGGAGTCCGGCGAC GCTGCTTCAGGAAACGTGATTACTTTTGAGGCTCTGGTATAG
Upstream 100 bases:
>100_bases GCGGAACGGGGAAATCTGATCATCAAATCGTATAGTTGTAAGAAGAGCTTCGGGCGGGCAAGTGCCGGACATTGTCTGCC TGAACAGCAGGAGTATTGTT
Downstream 100 bases:
>100_bases AAGCTGAATGAGCCCCGATGGTTTTTTTAAAAACTATTGAATACAGCGGCGGCAGACTCTGTTGTGCATGCAGCCTGCCG CGGTGGCCGGGTTGTACCGG
Product: methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase Domain Family; UbiE/COQ5 Family Methlytransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MQNKYGALAAMVYHADKPVGRSFGDVEFYLERLDGVCGPVLEPAVGNGRFLIPLLEAGHTVYGFDASSHMLDICKQEISI RNLADNVSMQRFDDFCYSEKFSAAVIPAGSIQLITSPDECLMFLKRLKGGLSSSGKVIIDTDSLACMVDPGPETRMWNLG DEILTLTESRVRTNYLHQTTVSLLKYEHWRSGQLVSSEMDVFMLRFWGVFEFQSLLIQAGFKNISVTLDYGTPFLRESGD AASGNVITFEALV
Sequences:
>Translated_253_residues MQNKYGALAAMVYHADKPVGRSFGDVEFYLERLDGVCGPVLEPAVGNGRFLIPLLEAGHTVYGFDASSHMLDICKQEISI RNLADNVSMQRFDDFCYSEKFSAAVIPAGSIQLITSPDECLMFLKRLKGGLSSSGKVIIDTDSLACMVDPGPETRMWNLG DEILTLTESRVRTNYLHQTTVSLLKYEHWRSGQLVSSEMDVFMLRFWGVFEFQSLLIQAGFKNISVTLDYGTPFLRESGD AASGNVITFEALV >Mature_253_residues MQNKYGALAAMVYHADKPVGRSFGDVEFYLERLDGVCGPVLEPAVGNGRFLIPLLEAGHTVYGFDASSHMLDICKQEISI RNLADNVSMQRFDDFCYSEKFSAAVIPAGSIQLITSPDECLMFLKRLKGGLSSSGKVIIDTDSLACMVDPGPETRMWNLG DEILTLTESRVRTNYLHQTTVSLLKYEHWRSGQLVSSEMDVFMLRFWGVFEFQSLLIQAGFKNISVTLDYGTPFLRESGD AASGNVITFEALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28077; Mature: 28077
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNKYGALAAMVYHADKPVGRSFGDVEFYLERLDGVCGPVLEPAVGNGRFLIPLLEAGHT CCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCE VYGFDASSHMLDICKQEISIRNLADNVSMQRFDDFCYSEKFSAAVIPAGSIQLITSPDEC EEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHH LMFLKRLKGGLSSSGKVIIDTDSLACMVDPGPETRMWNLGDEILTLTESRVRTNYLHQTT HHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH VSLLKYEHWRSGQLVSSEMDVFMLRFWGVFEFQSLLIQAGFKNISVTLDYGTPFLRESGD HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCC AASGNVITFEALV CCCCCEEEEEEEC >Mature Secondary Structure MQNKYGALAAMVYHADKPVGRSFGDVEFYLERLDGVCGPVLEPAVGNGRFLIPLLEAGHT CCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCE VYGFDASSHMLDICKQEISIRNLADNVSMQRFDDFCYSEKFSAAVIPAGSIQLITSPDEC EEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHH LMFLKRLKGGLSSSGKVIIDTDSLACMVDPGPETRMWNLGDEILTLTESRVRTNYLHQTT HHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH VSLLKYEHWRSGQLVSSEMDVFMLRFWGVFEFQSLLIQAGFKNISVTLDYGTPFLRESGD HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCC AASGNVITFEALV CCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA