| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356290
Identifier: 78356290
GI number: 78356290
Start: 1258476
End: 1258658
Strand: Reverse
Name: 78356290
Synonym: Dde_1243
Alternate gene names: NA
Gene position: 1258658-1258476 (Counterclockwise)
Preceding gene: 78356294
Following gene: 78356289
Centisome position: 33.74
GC content: 56.83
Gene sequence:
>183_bases ATGGCTCAAGAGAAGAAAAGGCAGCTGCGGACCGTGCTGCAGACATGCCCGGAGAAGGTGGCCATCAGATGTGCCGGAAA AATATGCCCTGCCCTCCGGATACCTGCAAACAGGCTGTTTTTCCGGTTGGTACCCGATCCGCGTATTGCCCGTTGCTGCA AGCAGCAGGCACCCGGTTCATAA
Upstream 100 bases:
>100_bases GAAGCCGCAAGACCTAGCCCAAGGCGGTGCCACCGGCCGGTTCTTGCAATTAGAAAAAGAAATACAGCGCGTTCAATGCA AATAAGGTACGACATGCGAA
Downstream 100 bases:
>100_bases AAACTGATGCGGCCTAACGGCTACGCAAAAGACGTTCTCTTGTCCTCCCGCCGCCACACAGCACCTGACCGGCAGACAAG TTTGCGGCAGACCGCCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAQEKKRQLRTVLQTCPEKVAIRCAGKICPALRIPANRLFFRLVPDPRIARCCKQQAPGS
Sequences:
>Translated_60_residues MAQEKKRQLRTVLQTCPEKVAIRCAGKICPALRIPANRLFFRLVPDPRIARCCKQQAPGS >Mature_59_residues AQEKKRQLRTVLQTCPEKVAIRCAGKICPALRIPANRLFFRLVPDPRIARCCKQQAPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6777; Mature: 6646
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 8.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQEKKRQLRTVLQTCPEKVAIRCAGKICPALRIPANRLFFRLVPDPRIARCCKQQAPGS CCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCC >Mature Secondary Structure AQEKKRQLRTVLQTCPEKVAIRCAGKICPALRIPANRLFFRLVPDPRIARCCKQQAPGS CHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA