Click here to switch to the map view.

The map label for this gene is 78356239

Identifier: 78356239

GI number: 78356239

Start: 1220827

End: 1221591

Strand: Direct

Name: 78356239

Synonym: Dde_1192

Alternate gene names: NA

Gene position: 1220827-1221591 (Clockwise)

Preceding gene: 78356238

Following gene: 78356240

Centisome position: 32.73

GC content: 60.65

Gene sequence:

>765_bases
ATGTTTGATGAACCTTTCAGCCGCGGCACCAGCCTGTTGCATCGTCTTGATCCCCGCATAAAGCTGACCGCGGCTTTTGT
GCTGTCGTGCATTGTTGCCGTGGCCGCCCGCCGCGATGTGGCGCTGGCGGCGCTGTGCGCGGCGGCTTTTCTGGCCGTGT
GGTCGCGCCCGCCCGTGCGGCCGTTGCTCGGCCGTCTTGCGGCGGTGAATGTCTTTGTGCTGTTTTTGTGGGTCGTGCTG
CCCTTTACATACGGCGGTGTGCAGACGGATGAAGGCGTATTCGCGGTATCCCGCGCCGGGGTGGACATGGCGCTGCTTGT
CACTCTGAAATCCAACGCCATCGTGTTGCTTTTCATTGCCTGTGTGGCCACATCGGACGCGGCGGCTGTGGGGCATGCGT
TGTGCAGGCTGGGGGTGCCGCGCAAGCTGGTGTTTCTTTTTCTTTTCACGTACCGCTATGTGCATGTGCTGCTGCAGGAA
TATGAGCGCCTGCGCACGGCCGCCCGGCTGCGCGGGTTTGTGCCCGGTACCGGACTGCATACATACCGTACTCTGGCCAA
TATGCTGGGCATGGTCATCCTGCGCAGTCTCGACCGGTCGCAGCGGGTGTACGAAGCCATGATTCTGCGCGGGTTTGACG
GTCGTTTTCATTCATTGTGCACTTTACGGCTGCACCGGCGTGATGTTGTTTTCGGCTGCGGTGCGGCTGTGGCGGCCTGT
ATGCTTGTTTATGCGGAATTTGCCGGAGGACTGCATGTCATCTGA

Upstream 100 bases:

>100_bases
GGCCGGGGTTTGCCGACATTCTGGGCGGTCTGGGATATTTTGCAGGGCTGTTCGGCATTGCCGCGTATCTTAAAAGCCGC
AGGCGCTGACCGGACCATAT

Downstream 100 bases:

>100_bases
AACTGCTTTGCTGCAACTGCGCGGGGTCCGTTACCGGTATCCGGGAGCGGAAAATGACGTGCTGGCCGGTATTGATTTTG
CGCTGCACCGCCATGACCGC

Product: cobalt ABC transporter permease

Products: NA

Alternate protein names: Cobalt ABC Transporter Permease Protein CbiQ; Cobalt ABC Transporter CbiQ Permease Subunit; Cobalt ABC Transporter Permease; Cobalt ABC Transporter; Cobalt ABC Transporter Permease Protein; Nickel ABC Transporter Membrane Protein NikQ

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFDEPFSRGTSLLHRLDPRIKLTAAFVLSCIVAVAARRDVALAALCAAAFLAVWSRPPVRPLLGRLAAVNVFVLFLWVVL
PFTYGGVQTDEGVFAVSRAGVDMALLVTLKSNAIVLLFIACVATSDAAAVGHALCRLGVPRKLVFLFLFTYRYVHVLLQE
YERLRTAARLRGFVPGTGLHTYRTLANMLGMVILRSLDRSQRVYEAMILRGFDGRFHSLCTLRLHRRDVVFGCGAAVAAC
MLVYAEFAGGLHVI

Sequences:

>Translated_254_residues
MFDEPFSRGTSLLHRLDPRIKLTAAFVLSCIVAVAARRDVALAALCAAAFLAVWSRPPVRPLLGRLAAVNVFVLFLWVVL
PFTYGGVQTDEGVFAVSRAGVDMALLVTLKSNAIVLLFIACVATSDAAAVGHALCRLGVPRKLVFLFLFTYRYVHVLLQE
YERLRTAARLRGFVPGTGLHTYRTLANMLGMVILRSLDRSQRVYEAMILRGFDGRFHSLCTLRLHRRDVVFGCGAAVAAC
MLVYAEFAGGLHVI
>Mature_254_residues
MFDEPFSRGTSLLHRLDPRIKLTAAFVLSCIVAVAARRDVALAALCAAAFLAVWSRPPVRPLLGRLAAVNVFVLFLWVVL
PFTYGGVQTDEGVFAVSRAGVDMALLVTLKSNAIVLLFIACVATSDAAAVGHALCRLGVPRKLVFLFLFTYRYVHVLLQE
YERLRTAARLRGFVPGTGLHTYRTLANMLGMVILRSLDRSQRVYEAMILRGFDGRFHSLCTLRLHRRDVVFGCGAAVAAC
MLVYAEFAGGLHVI

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27914; Mature: 27914

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA