| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356217
Identifier: 78356217
GI number: 78356217
Start: 1194242
End: 1194865
Strand: Reverse
Name: 78356217
Synonym: Dde_1170
Alternate gene names: NA
Gene position: 1194865-1194242 (Counterclockwise)
Preceding gene: 78356218
Following gene: 78356215
Centisome position: 32.03
GC content: 58.81
Gene sequence:
>624_bases ATGTACGCCATAGCCATCAACGGCAGTCCCCGCAAAGGCGGCAATACGGAAACCCTGCTGCGCCAGACTCTGGCCCCGCT GGAAAAAGCAGGATGGGAAACGGAACTTGTCCGCGTGGGCGGCAAACCGGTACGGGGCTGCATAGCCTGCTACAAGTGTT TTGAAAATAAAGACGGGCGGTGTTCCGTCACGACCGACCTGTTCAATGATCTGGCGGAAAAAATTTTCCGCGCCGACGCA ATCATCATGGGGTCGCCCACATACTTTGCCGACGTCTCATCCGAAATGAAGGCCGTTCTCGACAGAACAGGTCTTGTCTC CATTGCCAACGGACACCTGCTGCGCGGCAAGATAGGGGCCGCTGTGGTAGCTGTGCGCAGAGGCGGCGGCATCCACGTTT TTGACAGCATCAACCACATGTTCATGATGTCGCAGATGATCGTTCCCGGTTCCGTATACTGGAATCTGGGCTACGGCCTG CACAAAGGCGAAGTCTCCGGCGATGCCGAAGGCATGGGTAACATGGATCATCTGGGCAGGACCATTGACTGGCTCGGACG GGCCACCGCACCGGTGCGCGGCGAGTATCCTGTCGCTTCCGGCCCCGGCGAGGGCGAAGCCTAG
Upstream 100 bases:
>100_bases AAAGCGGGCCGCATATACTATGGAAACCATGCCCTGCGCCTGTGCCGCAGACCGGCATATGCAAACGCAACGCGGCACCC GCCGCAACAAGGAGAACAGC
Downstream 100 bases:
>100_bases CCTCCGTCAAGGTGAATACATGAAAAGGCGGGCAGCCGTGCTGCCCGCCTCTTATCTACCGGTAATAAAATTACGGCTCA ATGCGGGTTCCCAGTACCTC
Product: FMN reductase, NADPH-dependent
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MYAIAINGSPRKGGNTETLLRQTLAPLEKAGWETELVRVGGKPVRGCIACYKCFENKDGRCSVTTDLFNDLAEKIFRADA IIMGSPTYFADVSSEMKAVLDRTGLVSIANGHLLRGKIGAAVVAVRRGGGIHVFDSINHMFMMSQMIVPGSVYWNLGYGL HKGEVSGDAEGMGNMDHLGRTIDWLGRATAPVRGEYPVASGPGEGEA
Sequences:
>Translated_207_residues MYAIAINGSPRKGGNTETLLRQTLAPLEKAGWETELVRVGGKPVRGCIACYKCFENKDGRCSVTTDLFNDLAEKIFRADA IIMGSPTYFADVSSEMKAVLDRTGLVSIANGHLLRGKIGAAVVAVRRGGGIHVFDSINHMFMMSQMIVPGSVYWNLGYGL HKGEVSGDAEGMGNMDHLGRTIDWLGRATAPVRGEYPVASGPGEGEA >Mature_207_residues MYAIAINGSPRKGGNTETLLRQTLAPLEKAGWETELVRVGGKPVRGCIACYKCFENKDGRCSVTTDLFNDLAEKIFRADA IIMGSPTYFADVSSEMKAVLDRTGLVSIANGHLLRGKIGAAVVAVRRGGGIHVFDSINHMFMMSQMIVPGSVYWNLGYGL HKGEVSGDAEGMGNMDHLGRTIDWLGRATAPVRGEYPVASGPGEGEA
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 22164; Mature: 22164
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAIAINGSPRKGGNTETLLRQTLAPLEKAGWETELVRVGGKPVRGCIACYKCFENKDGR CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC CSVTTDLFNDLAEKIFRADAIIMGSPTYFADVSSEMKAVLDRTGLVSIANGHLLRGKIGA EEEHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCE AVVAVRRGGGIHVFDSINHMFMMSQMIVPGSVYWNLGYGLHKGEVSGDAEGMGNMDHLGR EEEEEECCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHH TIDWLGRATAPVRGEYPVASGPGEGEA HHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYAIAINGSPRKGGNTETLLRQTLAPLEKAGWETELVRVGGKPVRGCIACYKCFENKDGR CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC CSVTTDLFNDLAEKIFRADAIIMGSPTYFADVSSEMKAVLDRTGLVSIANGHLLRGKIGA EEEHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCE AVVAVRRGGGIHVFDSINHMFMMSQMIVPGSVYWNLGYGLHKGEVSGDAEGMGNMDHLGR EEEEEECCCCEEEEHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHH TIDWLGRATAPVRGEYPVASGPGEGEA HHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]