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The map label for this gene is yegE [C]

Identifier: 78356213

GI number: 78356213

Start: 1190082

End: 1192424

Strand: Reverse

Name: yegE [C]

Synonym: Dde_1166

Alternate gene names: 78356213

Gene position: 1192424-1190082 (Counterclockwise)

Preceding gene: 78356214

Following gene: 78356210

Centisome position: 31.97

GC content: 60.56

Gene sequence:

>2343_bases
GTGCAGCACGGAACGGGAAAACGCATTGCGTTTATCTGCGCCGCCGTGCTGCTTATCGCCATTACAGCATCGCTGGGAGC
TGCTCTTTTTCTGCGCCTTGCCGGAATACCGGAAAGCGGGGCACTTTTTGCTTTGCTGCCGCCGTTGGCCGGTGGTTGTG
CCGCAACTCTGTGCGGTATCGCCGCATGGCTGCAGATGCGCGCCGCGTGGACAAAGCAGCTGCGCGAACACGCGCGCACA
GCAGCCCAGCTCAGTTCGCTGGAAGAAAACCACCATCAGCTGCGCAGACGCCTTGCAGAAGCGGAGCGTGAGCGCGCCCA
CCTGCGCAAGCAGGCGGACAGCGCCCTTTCCGACATTGCCTCGCGCCGCGGAGAAGCAAAATTTCAGGCCACCTTTCACG
CCACGCCGGATCCCATAATGGTGGTCAATCTGCACACCGGGCTGGTGCTGGACGTCAATGAAAGCCTGCAGCGCCTGCTT
GCCCGCGACTGGGGGCAGCTGCTGGGCGAATCTCTGGACAGTCTGCTGGAATGGGGCAACGGTGCGCGCAACAGGTTTGA
ACTGATGCTGGAGCGCGAAGGCAGTGTGAGCAACCTGCCCGCCGTCATGCACGACGGCGGCGGCACACCTCACCATGTGC
TCATCTCCGCCCGCCATGTCCAGCTGGAGGGGTTTTCCTGCGCCATCGCCATTGCCCGTGACATAAGCGACCATCACCGG
CTGCAGGAACAGCTGGCGGAAAAAACATCCCTGCTGGAAAACGTTCTCGCGCACATTCCCTACCATGTCTTCTGGAAAGA
CAGAAACAGCAGGTATCTGGGAGCCAACGAACTGTATGCCCGCAACCTGTTCAACGCTTCTGTCAACGACATACTGGGGC
TCACCGACACCGATCTGGGCATGTCCGCCGTCCTCGGCGGCGCCATACTGCGCGAAGAACAGGAAGTGCTGGACACAGGC
CGTCCGGTTATCAATGCCGAACGCACCATTCCGCTGCATGACGGCAGAACAGTCATAGGGCTGGTGAGCAAAGTGCCTTT
GCTGGATGCCAACGGACAACCGCAGGGCGTACTGGGTATTTCGGCCGACATAACCAACCTGAGAGCATACGAACGGCAGC
TGCACGCCCTGCTGGACGGACTGCCCGACATGGCATGGATCAAGGACGCAGGCAGTGTGTATCTGGCCGTCAATCAGGCC
TTTGCCGATTTTCTGCACCGCGACCCGCTGGATGTTCCCGGCAGGACAGACGAAGACCTGTGGCCGGGCGAACTTGCCGC
CAACCAGCGGCAGAGCGATGCCGACGCCATGACAAGGCTGGCCGACCTGCGATACGACCAGTGGCTTGCCGGTGCCGGAG
GGGTCTCCATCTGGGCCGATATCATCAAACGTCCCATCATGGAAAAAGACGCTTCGGGCAACACCGTGGCCGTGGGTACG
GTGGGTATCGCCCGCGATATCTCACAGCGGCGCGCTCAGGAAAGCCGCATCCGCATGCTGTCGGAAGCGCTGGAACAGAG
TTCCGTGGCCGTGGTGGTCACCGACCCTGCCGGAAACACCGTGCACCTGAACCCGCGTTACGAAGAAATAACCGGCTTTA
CGCTGCACGAACTGCAGGGCAGGCCGCTGCCGCTGCTGGCCGACCCTGAAAGCTCGGCACCGGTATGGGAGGCGCTGCAC
AAAGGTGAGCGCTGGCGGCAGGAGATAAAAAGCCCGCGCAAGGACGGCGATGACCGCTGGCTGTCTGTTTCCGTTGCTCC
CGTGGTGGACAACGACGGACATCCGGCCAACATAGTTCTGGTGCTGGAAGACATCACGGAACAAAAACGCAGCGAAGAGC
ATATCCGGCATCTGGCCATGCACGACGGCCTGACGGGGCTGCCCAACAGACGGCTTTTCATGGACAGACTGCGCCGTTCC
GTTGCCATGAGCAAAAGAAACGGGGTCCGTTTTGCCGTTCTGTTCATCGACCTTAATGATTTTAAAGAGATAAATGACAC
TCTGGGCCATGAAGCAGGCGACCATGTGTTGCGCACCGTAGCTGAAAGACTGCGCCAGAGTCTGCGCGAGGTGGACACAT
GCGCACGGATCGGCGGAGACGAATTCATCGTTCTGCTGCACGATATCCGCAGTAACGAAGATCTGGCGCACGCATCCGAA
CGGGTTTCCGCCGCCATCAGCACCCCCATAAACCTGAACGGCACCGTGCGTGTTGTTTCAGGCTCCATCGGCATTGCCGT
CTGCCCCGACGACGCCACCGACGTGGACCAGATTATCAGCCACGCCGACCACGCCATGTACCGCTGCAAACGCAACCGCA
GATACGACAGTGCCTCACGCTGA

Upstream 100 bases:

>100_bases
GCCGCAACCGGAAATTCATCCCGACAGGCCGCCGCACAGTCATGGGGACGGGAGGCGGTGAAGTCTGGCGGGAGCGGGGG
AAGGTATCAACAGGTCCGCC

Downstream 100 bases:

>100_bases
GCGCCGGTGACGGACCGCTCAATTCACTCCGGCGTGCTGCCGTTATGCGGCAGCCCCACGGTAAAACAGCTGCCTCTGCC
CGGCGCCGATGTCACCGTCA

Product: diguanylate cyclase with PAS/PAC sensor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 780; Mature: 780

Protein sequence:

>780_residues
MQHGTGKRIAFICAAVLLIAITASLGAALFLRLAGIPESGALFALLPPLAGGCAATLCGIAAWLQMRAAWTKQLREHART
AAQLSSLEENHHQLRRRLAEAERERAHLRKQADSALSDIASRRGEAKFQATFHATPDPIMVVNLHTGLVLDVNESLQRLL
ARDWGQLLGESLDSLLEWGNGARNRFELMLEREGSVSNLPAVMHDGGGTPHHVLISARHVQLEGFSCAIAIARDISDHHR
LQEQLAEKTSLLENVLAHIPYHVFWKDRNSRYLGANELYARNLFNASVNDILGLTDTDLGMSAVLGGAILREEQEVLDTG
RPVINAERTIPLHDGRTVIGLVSKVPLLDANGQPQGVLGISADITNLRAYERQLHALLDGLPDMAWIKDAGSVYLAVNQA
FADFLHRDPLDVPGRTDEDLWPGELAANQRQSDADAMTRLADLRYDQWLAGAGGVSIWADIIKRPIMEKDASGNTVAVGT
VGIARDISQRRAQESRIRMLSEALEQSSVAVVVTDPAGNTVHLNPRYEEITGFTLHELQGRPLPLLADPESSAPVWEALH
KGERWRQEIKSPRKDGDDRWLSVSVAPVVDNDGHPANIVLVLEDITEQKRSEEHIRHLAMHDGLTGLPNRRLFMDRLRRS
VAMSKRNGVRFAVLFIDLNDFKEINDTLGHEAGDHVLRTVAERLRQSLREVDTCARIGGDEFIVLLHDIRSNEDLAHASE
RVSAAISTPINLNGTVRVVSGSIGIAVCPDDATDVDQIISHADHAMYRCKRNRRYDSASR

Sequences:

>Translated_780_residues
MQHGTGKRIAFICAAVLLIAITASLGAALFLRLAGIPESGALFALLPPLAGGCAATLCGIAAWLQMRAAWTKQLREHART
AAQLSSLEENHHQLRRRLAEAERERAHLRKQADSALSDIASRRGEAKFQATFHATPDPIMVVNLHTGLVLDVNESLQRLL
ARDWGQLLGESLDSLLEWGNGARNRFELMLEREGSVSNLPAVMHDGGGTPHHVLISARHVQLEGFSCAIAIARDISDHHR
LQEQLAEKTSLLENVLAHIPYHVFWKDRNSRYLGANELYARNLFNASVNDILGLTDTDLGMSAVLGGAILREEQEVLDTG
RPVINAERTIPLHDGRTVIGLVSKVPLLDANGQPQGVLGISADITNLRAYERQLHALLDGLPDMAWIKDAGSVYLAVNQA
FADFLHRDPLDVPGRTDEDLWPGELAANQRQSDADAMTRLADLRYDQWLAGAGGVSIWADIIKRPIMEKDASGNTVAVGT
VGIARDISQRRAQESRIRMLSEALEQSSVAVVVTDPAGNTVHLNPRYEEITGFTLHELQGRPLPLLADPESSAPVWEALH
KGERWRQEIKSPRKDGDDRWLSVSVAPVVDNDGHPANIVLVLEDITEQKRSEEHIRHLAMHDGLTGLPNRRLFMDRLRRS
VAMSKRNGVRFAVLFIDLNDFKEINDTLGHEAGDHVLRTVAERLRQSLREVDTCARIGGDEFIVLLHDIRSNEDLAHASE
RVSAAISTPINLNGTVRVVSGSIGIAVCPDDATDVDQIISHADHAMYRCKRNRRYDSASR
>Mature_780_residues
MQHGTGKRIAFICAAVLLIAITASLGAALFLRLAGIPESGALFALLPPLAGGCAATLCGIAAWLQMRAAWTKQLREHART
AAQLSSLEENHHQLRRRLAEAERERAHLRKQADSALSDIASRRGEAKFQATFHATPDPIMVVNLHTGLVLDVNESLQRLL
ARDWGQLLGESLDSLLEWGNGARNRFELMLEREGSVSNLPAVMHDGGGTPHHVLISARHVQLEGFSCAIAIARDISDHHR
LQEQLAEKTSLLENVLAHIPYHVFWKDRNSRYLGANELYARNLFNASVNDILGLTDTDLGMSAVLGGAILREEQEVLDTG
RPVINAERTIPLHDGRTVIGLVSKVPLLDANGQPQGVLGISADITNLRAYERQLHALLDGLPDMAWIKDAGSVYLAVNQA
FADFLHRDPLDVPGRTDEDLWPGELAANQRQSDADAMTRLADLRYDQWLAGAGGVSIWADIIKRPIMEKDASGNTVAVGT
VGIARDISQRRAQESRIRMLSEALEQSSVAVVVTDPAGNTVHLNPRYEEITGFTLHELQGRPLPLLADPESSAPVWEALH
KGERWRQEIKSPRKDGDDRWLSVSVAPVVDNDGHPANIVLVLEDITEQKRSEEHIRHLAMHDGLTGLPNRRLFMDRLRRS
VAMSKRNGVRFAVLFIDLNDFKEINDTLGHEAGDHVLRTVAERLRQSLREVDTCARIGGDEFIVLLHDIRSNEDLAHASE
RVSAAISTPINLNGTVRVVSGSIGIAVCPDDATDVDQIISHADHAMYRCKRNRRYDSASR

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=311, Percent_Identity=31.1897106109325, Blast_Score=126, Evalue=5e-30,
Organism=Escherichia coli, GI1787541, Length=322, Percent_Identity=29.5031055900621, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI145693134, Length=164, Percent_Identity=39.6341463414634, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI87081881, Length=202, Percent_Identity=34.1584158415842, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI87081977, Length=154, Percent_Identity=35.0649350649351, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788956, Length=156, Percent_Identity=35.2564102564103, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1787262, Length=162, Percent_Identity=33.9506172839506, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI87082007, Length=166, Percent_Identity=34.9397590361446, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786584, Length=168, Percent_Identity=32.7380952380952, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081974, Length=110, Percent_Identity=31.8181818181818, Blast_Score=74, Evalue=5e-14,
Organism=Escherichia coli, GI1787816, Length=162, Percent_Identity=33.9506172839506, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788085, Length=153, Percent_Identity=30.718954248366, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081921, Length=167, Percent_Identity=28.7425149700599, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 85997; Mature: 85997

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHGTGKRIAFICAAVLLIAITASLGAALFLRLAGIPESGALFALLPPLAGGCAATLCGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH
AAWLQMRAAWTKQLREHARTAAQLSSLEENHHQLRRRLAEAERERAHLRKQADSALSDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRRGEAKFQATFHATPDPIMVVNLHTGLVLDVNESLQRLLARDWGQLLGESLDSLLEWGN
HCCCCCEEEEEEECCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GARNRFELMLEREGSVSNLPAVMHDGGGTPHHVLISARHVQLEGFSCAIAIARDISDHHR
CCCCHHHEEEECCCCCCCCCHHEECCCCCCCEEEEEEEEEEECCCEEEEHHHHHHHHHHH
LQEQLAEKTSLLENVLAHIPYHVFWKDRNSRYLGANELYARNLFNASVNDILGLTDTDLG
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCC
MSAVLGGAILREEQEVLDTGRPVINAERTIPLHDGRTVIGLVSKVPLLDANGQPQGVLGI
HHHHHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHCCCEECCCCCCCEEEEE
SADITNLRAYERQLHALLDGLPDMAWIKDAGSVYLAVNQAFADFLHRDPLDVPGRTDEDL
CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCC
WPGELAANQRQSDADAMTRLADLRYDQWLAGAGGVSIWADIIKRPIMEKDASGNTVAVGT
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
VGIARDISQRRAQESRIRMLSEALEQSSVAVVVTDPAGNTVHLNPRYEEITGFTLHELQG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCHHHHCCCCHHHCCC
RPLPLLADPESSAPVWEALHKGERWRQEIKSPRKDGDDRWLSVSVAPVVDNDGHPANIVL
CCCCEEECCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCEEEEE
VLEDITEQKRSEEHIRHLAMHDGLTGLPNRRLFMDRLRRSVAMSKRNGVRFAVLFIDLND
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECHH
FKEINDTLGHEAGDHVLRTVAERLRQSLREVDTCARIGGDEFIVLLHDIRSNEDLAHASE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH
RVSAAISTPINLNGTVRVVSGSIGIAVCPDDATDVDQIISHADHAMYRCKRNRRYDSASR
HHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQHGTGKRIAFICAAVLLIAITASLGAALFLRLAGIPESGALFALLPPLAGGCAATLCGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH
AAWLQMRAAWTKQLREHARTAAQLSSLEENHHQLRRRLAEAERERAHLRKQADSALSDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRRGEAKFQATFHATPDPIMVVNLHTGLVLDVNESLQRLLARDWGQLLGESLDSLLEWGN
HCCCCCEEEEEEECCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GARNRFELMLEREGSVSNLPAVMHDGGGTPHHVLISARHVQLEGFSCAIAIARDISDHHR
CCCCHHHEEEECCCCCCCCCHHEECCCCCCCEEEEEEEEEEECCCEEEEHHHHHHHHHHH
LQEQLAEKTSLLENVLAHIPYHVFWKDRNSRYLGANELYARNLFNASVNDILGLTDTDLG
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCC
MSAVLGGAILREEQEVLDTGRPVINAERTIPLHDGRTVIGLVSKVPLLDANGQPQGVLGI
HHHHHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHCCCEECCCCCCCEEEEE
SADITNLRAYERQLHALLDGLPDMAWIKDAGSVYLAVNQAFADFLHRDPLDVPGRTDEDL
CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCC
WPGELAANQRQSDADAMTRLADLRYDQWLAGAGGVSIWADIIKRPIMEKDASGNTVAVGT
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
VGIARDISQRRAQESRIRMLSEALEQSSVAVVVTDPAGNTVHLNPRYEEITGFTLHELQG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCHHHHCCCCHHHCCC
RPLPLLADPESSAPVWEALHKGERWRQEIKSPRKDGDDRWLSVSVAPVVDNDGHPANIVL
CCCCEEECCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCEEEEE
VLEDITEQKRSEEHIRHLAMHDGLTGLPNRRLFMDRLRRSVAMSKRNGVRFAVLFIDLND
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECHH
FKEINDTLGHEAGDHVLRTVAERLRQSLREVDTCARIGGDEFIVLLHDIRSNEDLAHASE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH
RVSAAISTPINLNGTVRVVSGSIGIAVCPDDATDVDQIISHADHAMYRCKRNRRYDSASR
HHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]