Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356205

Identifier: 78356205

GI number: 78356205

Start: 1183359

End: 1184171

Strand: Direct

Name: 78356205

Synonym: Dde_1158

Alternate gene names: NA

Gene position: 1183359-1184171 (Clockwise)

Preceding gene: 78356199

Following gene: 78356206

Centisome position: 31.72

GC content: 58.43

Gene sequence:

>813_bases
ATGAAAGCCACGGATTTTTCTGAATCGGAACTGCGTATGCAGGAGTATGTGGAGCACGCCATAAGCAGGCTGGGCGGTGT
GCGTGAAGTCGCCGTTGCCGCCGGTGTGAGCCGCCGGACCGTATATGCATGGAAAAACGGTGAGCGGTTTCCCAGCCGGA
GCAATCTGAACCGCCTTTCCGGTGTGCTCATGCGCTGTGCTCCGTCCGAATCTCCCGTGCCGGAATTTCCTGCCGCCGAT
GGCCGTGAATCTGCTGCCGGTCTGGGTGTGCACGAAAACGACGGCACGGAGTATGGCCGCAGGGCCGCCTTTGGCGCCAC
GGGCGCAGCTGCGCATGCGGCGCATCCGTTGCACGATTTTTCCGATATGCCTGACCTGCGCGGAGTGCTGGACGAGTTTG
TCTTTGTGTCCAAGGCAGATGCGCGGCCCAGTGCCGGGGGCGGGTCTTTGCAGACAGGGGCGGAGAACGTCGAGCGCCAT
GCCTTCCGGCTTGACTGGCTGCTCAGCAAAACGCACGACACATCATCGCTGCGGCTTATGGAAGTCATGGGAAGGTCCAT
GGAACCGACGCTGCACAACGGCGATGATGTACTTGTCAATGAAGGCGACACATATCTTGTGGAAGATAAAGTGTATGTTG
TCCGTGTGCAGGACGAAATTTATATCAAACGGTTTGCCCGTACTCCGGGCAGGCTGCTTTTCCGCGGTGATAACCGCGAC
CTTGCCTATCAGGACATCGAAATTGACCCGCAGGACGTTTCCTGTGACTGGACAGTCATCGGACGCGTGATATGGGCAGG
CAAGGAGTTGTAG

Upstream 100 bases:

>100_bases
TGAACAGATATTTCATAAAGTGCACAGAATCGTCAAGTGAGTTTCGCACATTGACGTCAAGGCACTTTACATTTCCACAA
AATGTGGTATAAACACACCC

Downstream 100 bases:

>100_bases
TGCGCAGGCACGCATAGGTTTTTTTGCGGTCTTTTTCTGCCGTCACCGCGTTCCGCTCCTTCCCGCACAAAGGAAGTGTC
CCGCGGGCCGGTTTGCCGGT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Peptidase; S24 Family Peptidase; C Repressor; UmuD/LexA Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; LexA-Family Protein; Prophage; Prophage MuSo1 Cro/CI Family Transcriptional Regulator; Prophage Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Repressor

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLSGVLMRCAPSESPVPEFPAAD
GRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDFSDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERH
AFRLDWLLSKTHDTSSLRLMEVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD
LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL

Sequences:

>Translated_270_residues
MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLSGVLMRCAPSESPVPEFPAAD
GRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDFSDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERH
AFRLDWLLSKTHDTSSLRLMEVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD
LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL
>Mature_270_residues
MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLSGVLMRCAPSESPVPEFPAAD
GRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDFSDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERH
AFRLDWLLSKTHDTSSLRLMEVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD
LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29867; Mature: 29867

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLS
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH
GVLMRCAPSESPVPEFPAADGRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDF
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHCCCCHHH
SDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERHAFRLDWLLSKTHDTSSLRLM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
EVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD
HHHCCCCCCCCCCCCEEEEECCCEEEEECCEEEEEECHHHHHHHHHCCCCCEEEECCCCC
LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL
EEEEECEECCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLS
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH
GVLMRCAPSESPVPEFPAADGRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDF
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHCCCCHHH
SDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERHAFRLDWLLSKTHDTSSLRLM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
EVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD
HHHCCCCCCCCCCCCEEEEECCCEEEEECCEEEEEECHHHHHHHHHCCCCCEEEECCCCC
LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL
EEEEECEECCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA