| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356161
Identifier: 78356161
GI number: 78356161
Start: 1143197
End: 1143937
Strand: Direct
Name: 78356161
Synonym: Dde_1114
Alternate gene names: NA
Gene position: 1143197-1143937 (Clockwise)
Preceding gene: 78356160
Following gene: 78356181
Centisome position: 30.65
GC content: 56.95
Gene sequence:
>741_bases ATGTCTGACGAAGCTCGCAGAGTATTTAAAATGGAGACTATCCTCGGCCTTATCGCCGGTAAGCGCGGTGCCGACATCTC CGACCTGCTCGGGTTCCTTTCCCAGCGCGACCTTTCCGAAGTGGAAGAAGGCGCTGTGGCTCCCATTGCCAGAGGCTGGC TGTACAGCATGCACCCCGACTTCATGAAATGTGAGTTTGCAGAAACTGATGTTTTTGAAGAATGGGCTGCCAAGCAGGCT GCCCGTCTGGGTGACAACGTATCCATTGAGGCCATACCCGCAGCAGAAATGGCCGGCATATCGGCCGTGCTTGATAAAAT GGCCGCCGATGCTGCCGCCAATGCCGCTCAGGCCGCAGAAATAGCCGCACTGAAGGCACAGGTTGCCGAACTGACCCCCT TTAAGGCCGAAGCCGAAAAGCTGGGCAAAGAAGTGGAAAGCCTGAAGGGCAAGCTGGATACCGCCCAGACCGATGCCGCC AAGACCAAGAAGGAACTTGCCGGATTCAGCGGTAAAGTGGCCATCAATGAAAATGAGATTGAATCCAGTGTTAAGGACAT TGTCTCGCGCGCTGTGAAAGATGCGCTTAAAGCGCTGCCCGTGGGTGCGGCTGCCGGTGTTGCAGCTGCCGAAGTGGCAG AAGAAGCCGCCGCAGGCTTTGATGAGCCTGCCGGTTCCGATGTTCCCGAGGACTTCGGTTTCGGTGCTTCCGGTTCCGAC GGCGACGGCTTCGGCTTCTAA
Upstream 100 bases:
>100_bases CCTACGTGCGGATGATGGGCCGTCGCTAGTCACGTAACGGGGTGCCTTTGGGCGCCCCGATAAAGAACGATAAAACTTTT CCTTGAAATAGGAGGCAGAA
Downstream 100 bases:
>100_bases TATGTGAGGATAGAATCCGGTTTACCGGATTGTAACACCCTACGGTTGGCCCGGCTGCTTATGCAGCCGGGCCTTTCTTA TGGTGTTCTTACCGGATACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSDEARRVFKMETILGLIAGKRGADISDLLGFLSQRDLSEVEEGAVAPIARGWLYSMHPDFMKCEFAETDVFEEWAAKQA ARLGDNVSIEAIPAAEMAGISAVLDKMAADAAANAAQAAEIAALKAQVAELTPFKAEAEKLGKEVESLKGKLDTAQTDAA KTKKELAGFSGKVAINENEIESSVKDIVSRAVKDALKALPVGAAAGVAAAEVAEEAAAGFDEPAGSDVPEDFGFGASGSD GDGFGF
Sequences:
>Translated_246_residues MSDEARRVFKMETILGLIAGKRGADISDLLGFLSQRDLSEVEEGAVAPIARGWLYSMHPDFMKCEFAETDVFEEWAAKQA ARLGDNVSIEAIPAAEMAGISAVLDKMAADAAANAAQAAEIAALKAQVAELTPFKAEAEKLGKEVESLKGKLDTAQTDAA KTKKELAGFSGKVAINENEIESSVKDIVSRAVKDALKALPVGAAAGVAAAEVAEEAAAGFDEPAGSDVPEDFGFGASGSD GDGFGF >Mature_245_residues SDEARRVFKMETILGLIAGKRGADISDLLGFLSQRDLSEVEEGAVAPIARGWLYSMHPDFMKCEFAETDVFEEWAAKQAA RLGDNVSIEAIPAAEMAGISAVLDKMAADAAANAAQAAEIAALKAQVAELTPFKAEAEKLGKEVESLKGKLDTAQTDAAK TKKELAGFSGKVAINENEIESSVKDIVSRAVKDALKALPVGAAAGVAAAEVAEEAAAGFDEPAGSDVPEDFGFGASGSDG DGFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25501; Mature: 25370
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEARRVFKMETILGLIAGKRGADISDLLGFLSQRDLSEVEEGAVAPIARGWLYSMHPD CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC FMKCEFAETDVFEEWAAKQAARLGDNVSIEAIPAAEMAGISAVLDKMAADAAANAAQAAE HHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH IAALKAQVAELTPFKAEAEKLGKEVESLKGKLDTAQTDAAKTKKELAGFSGKVAINENEI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHH ESSVKDIVSRAVKDALKALPVGAAAGVAAAEVAEEAAAGFDEPAGSDVPEDFGFGASGSD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC GDGFGF CCCCCC >Mature Secondary Structure SDEARRVFKMETILGLIAGKRGADISDLLGFLSQRDLSEVEEGAVAPIARGWLYSMHPD CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC FMKCEFAETDVFEEWAAKQAARLGDNVSIEAIPAAEMAGISAVLDKMAADAAANAAQAAE HHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH IAALKAQVAELTPFKAEAEKLGKEVESLKGKLDTAQTDAAKTKKELAGFSGKVAINENEI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHH ESSVKDIVSRAVKDALKALPVGAAAGVAAAEVAEEAAAGFDEPAGSDVPEDFGFGASGSD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC GDGFGF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA