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The map label for this gene is rsmI [H]

Identifier: 78356139

GI number: 78356139

Start: 1122376

End: 1123209

Strand: Reverse

Name: rsmI [H]

Synonym: Dde_1092

Alternate gene names: 78356139

Gene position: 1123209-1122376 (Counterclockwise)

Preceding gene: 78356140

Following gene: 78356138

Centisome position: 30.11

GC content: 59.47

Gene sequence:

>834_bases
ATGCCTTCGACCTCTCCGAGTCTCTGGGTGGTGGCGACGCCGCTTGGCAACCTTGGTGACTTTTCGCCCCGCGCACGCGA
AGTGCTGGCAGCTGCCGACATGGTGCTGGCCGAAGACACCCGTAGAACGGCAGGACTGCTGCGCAACGCCGGTATAGAAG
CCCGCCTTGTCAGCTGCCATGATCATAACGAGGAACAGCGCATTCCGGAAATGCTTGAAGCCATGCGCGCCGGCAGCACG
CTGGCGCTGGTATCCGACGCAGGCACCCCGCTGTTCTCCGACCCCGGTTACAGGCTGGTAAGAGCAGCCCGCAAGGCAGG
ATTAACCGTCTCTGCCGTGCCCGGTCCCAGCGCTCCGCTCTGTGCGCTGGCTGCCAGCGGCATTGCGCCGCAGCCTTTCA
CCTTTCTGGGTTTTGCTCCGCGCAAACAGTCCGAGCAGCTCGCGTTCTTTGAACAGTTTGCCCGCACCCCGTCGACGCTC
ATTTTCTTTGAACGCAAAAACAGACTGCGGACCACGCTGGAAACGGCTTACAACGCACTGGGCCCGAGGGAACTTTGCGT
GGCAAGAGAATTGACCAAGGCCCATGAGGAGTTTATTCTCTGTCGTCTTGAAGAATTTCAGACCGTTCCGGACGATCTGC
TGGGCGAAATAACAGTCATTGTCGGACCGCCCGAAAAAGAGCAGGCTCTCGACACGCAGGCTCTGCGTGCGCTTATCGAA
GATGAGATGCGTCTGGGAGGCAAACCGCGTGAAGTCGCCCGCAGAACAGCGGACCGGGCTCCGGGCTGGAGCGTGAAAGA
AATTTACGAAATCATGAAGGATTTACGGACCTGA

Upstream 100 bases:

>100_bases
GCATCGCGCCTGTTCGGCGCCGGTTCGCCGCAGCGTTCCCACCGTGCGGGCGGTGCACCGGATTCTCCGGAACAACTTTT
ACGCGTGGAGCATATTCCCC

Downstream 100 bases:

>100_bases
CCATGGCACTGGACGCACGAACCCTGCTACGCTGTTTTCTGCGCACCTACACAGTGGGGGCCGCATTCAACACGCGCGGC
ATGCAGAATATCGGGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPSTSPSLWVVATPLGNLGDFSPRAREVLAAADMVLAEDTRRTAGLLRNAGIEARLVSCHDHNEEQRIPEMLEAMRAGST
LALVSDAGTPLFSDPGYRLVRAARKAGLTVSAVPGPSAPLCALAASGIAPQPFTFLGFAPRKQSEQLAFFEQFARTPSTL
IFFERKNRLRTTLETAYNALGPRELCVARELTKAHEEFILCRLEEFQTVPDDLLGEITVIVGPPEKEQALDTQALRALIE
DEMRLGGKPREVARRTADRAPGWSVKEIYEIMKDLRT

Sequences:

>Translated_277_residues
MPSTSPSLWVVATPLGNLGDFSPRAREVLAAADMVLAEDTRRTAGLLRNAGIEARLVSCHDHNEEQRIPEMLEAMRAGST
LALVSDAGTPLFSDPGYRLVRAARKAGLTVSAVPGPSAPLCALAASGIAPQPFTFLGFAPRKQSEQLAFFEQFARTPSTL
IFFERKNRLRTTLETAYNALGPRELCVARELTKAHEEFILCRLEEFQTVPDDLLGEITVIVGPPEKEQALDTQALRALIE
DEMRLGGKPREVARRTADRAPGWSVKEIYEIMKDLRT
>Mature_276_residues
PSTSPSLWVVATPLGNLGDFSPRAREVLAAADMVLAEDTRRTAGLLRNAGIEARLVSCHDHNEEQRIPEMLEAMRAGSTL
ALVSDAGTPLFSDPGYRLVRAARKAGLTVSAVPGPSAPLCALAASGIAPQPFTFLGFAPRKQSEQLAFFEQFARTPSTLI
FFERKNRLRTTLETAYNALGPRELCVARELTKAHEEFILCRLEEFQTVPDDLLGEITVIVGPPEKEQALDTQALRALIED
EMRLGGKPREVARRTADRAPGWSVKEIYEIMKDLRT

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=242, Percent_Identity=42.9752066115703, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30441; Mature: 30310

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTSPSLWVVATPLGNLGDFSPRAREVLAAADMVLAEDTRRTAGLLRNAGIEARLVSCH
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
DHNEEQRIPEMLEAMRAGSTLALVSDAGTPLFSDPGYRLVRAARKAGLTVSAVPGPSAPL
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCH
CALAASGIAPQPFTFLGFAPRKQSEQLAFFEQFARTPSTLIFFERKNRLRTTLETAYNAL
HHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHC
GPRELCVARELTKAHEEFILCRLEEFQTVPDDLLGEITVIVGPPEKEQALDTQALRALIE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHH
DEMRLGGKPREVARRTADRAPGWSVKEIYEIMKDLRT
HHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PSTSPSLWVVATPLGNLGDFSPRAREVLAAADMVLAEDTRRTAGLLRNAGIEARLVSCH
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
DHNEEQRIPEMLEAMRAGSTLALVSDAGTPLFSDPGYRLVRAARKAGLTVSAVPGPSAPL
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCH
CALAASGIAPQPFTFLGFAPRKQSEQLAFFEQFARTPSTLIFFERKNRLRTTLETAYNAL
HHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHC
GPRELCVARELTKAHEEFILCRLEEFQTVPDDLLGEITVIVGPPEKEQALDTQALRALIE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHH
DEMRLGGKPREVARRTADRAPGWSVKEIYEIMKDLRT
HHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]