| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is bcp [H]
Identifier: 78356074
GI number: 78356074
Start: 1052040
End: 1052531
Strand: Reverse
Name: bcp [H]
Synonym: Dde_1027
Alternate gene names: 78356074
Gene position: 1052531-1052040 (Counterclockwise)
Preceding gene: 78356075
Following gene: 78356073
Centisome position: 28.22
GC content: 58.94
Gene sequence:
>492_bases ATGTCCGTCACACCGGCCGGCATGCCGGCAGAAGGTTCGCCCGCCCCCGATTTCGCACTGGCAGACAAGGACGGAACCAC GCATACCCTGCAGTCTTTCAACGGCAGGTGGCTTGTGCTGTACTTTTACCCGCGGGCAAACACCCCCGGCTGCACGCGCG AAGGCAAAGACTTCACTGATCTGCTGCCGCGGTTTGAGGCGCTGGGCTGCACCGTGGCCGGTGTCAGTCCTGATTCGTTG AAATCGCTGTGTAATTTTGCGCAGAAACAGGAACTTGCCGTTACGCTGCTGTCCGACAAGGAAAAAGATGCGGCCTCTGC ATACGGTGTTTACCGCATGAAAAAGAGCTACGGCAAAGAATCGCCGGGCATTGTGCGGTCCACATTTCTCATCGACCCGG CAGGCATACTGCGCCGCGTATGGTCGCCCGTAACCGTGGACGGTCATGCCGCCGCAGTACTGGACGCACTGGAACTCCTT GCGGATTCATAG
Upstream 100 bases:
>100_bases GGGCGGTCTGCTGCGGCAGATGTTCGGCAGACCCGCTTCAAGGTAGCAGACACCGCCGCGCAGTCTTTTACATCGCGGCG GACAAACAAGGAGAACACCC
Downstream 100 bases:
>100_bases GTTGCGGTTATCCGCCTTGACAGGTGGCTCCCCCGTTGTTACCGCTTCAGGCAGTCATAAGACAACCTTCCGGGCTGTCT GCATGATGCGGACGGCGCTG
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSVTPAGMPAEGSPAPDFALADKDGTTHTLQSFNGRWLVLYFYPRANTPGCTREGKDFTDLLPRFEALGCTVAGVSPDSL KSLCNFAQKQELAVTLLSDKEKDAASAYGVYRMKKSYGKESPGIVRSTFLIDPAGILRRVWSPVTVDGHAAAVLDALELL ADS
Sequences:
>Translated_163_residues MSVTPAGMPAEGSPAPDFALADKDGTTHTLQSFNGRWLVLYFYPRANTPGCTREGKDFTDLLPRFEALGCTVAGVSPDSL KSLCNFAQKQELAVTLLSDKEKDAASAYGVYRMKKSYGKESPGIVRSTFLIDPAGILRRVWSPVTVDGHAAAVLDALELL ADS >Mature_162_residues SVTPAGMPAEGSPAPDFALADKDGTTHTLQSFNGRWLVLYFYPRANTPGCTREGKDFTDLLPRFEALGCTVAGVSPDSLK SLCNFAQKQELAVTLLSDKEKDAASAYGVYRMKKSYGKESPGIVRSTFLIDPAGILRRVWSPVTVDGHAAAVLDALELLA DS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=147, Percent_Identity=37.4149659863946, Blast_Score=105, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322180, Length=158, Percent_Identity=33.5443037974684, Blast_Score=71, Evalue=7e-14, Organism=Drosophila melanogaster, GI17738015, Length=137, Percent_Identity=35.7664233576642, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17500; Mature: 17369
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTPAGMPAEGSPAPDFALADKDGTTHTLQSFNGRWLVLYFYPRANTPGCTREGKDFTD CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHH LLPRFEALGCTVAGVSPDSLKSLCNFAQKQELAVTLLSDKEKDAASAYGVYRMKKSYGKE HHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCC SPGIVRSTFLIDPAGILRRVWSPVTVDGHAAAVLDALELLADS CCCCEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SVTPAGMPAEGSPAPDFALADKDGTTHTLQSFNGRWLVLYFYPRANTPGCTREGKDFTD CCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHH LLPRFEALGCTVAGVSPDSLKSLCNFAQKQELAVTLLSDKEKDAASAYGVYRMKKSYGKE HHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCC SPGIVRSTFLIDPAGILRRVWSPVTVDGHAAAVLDALELLADS CCCCEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]