| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356058
Identifier: 78356058
GI number: 78356058
Start: 1034001
End: 1035347
Strand: Reverse
Name: 78356058
Synonym: Dde_1011
Alternate gene names: NA
Gene position: 1035347-1034001 (Counterclockwise)
Preceding gene: 78356060
Following gene: 78356057
Centisome position: 27.76
GC content: 58.87
Gene sequence:
>1347_bases ATGAAACGTATTGCTACTCTGCTTCTCGCAGCAGCTTTCGTGTTCGGCACCGTTGCCGCCGGCTCTGCTGCCGAGTTCAA AACCACCGGTCAGTTCGACTTCGGTTTCCAGTGGACCGACAACACCGGTTTCCAGGACGCTAAAAAGGCCGGCGCCTCCG AAGACGACTTCGACGTTCGCCAGCGCGTACGCGTTCAGACTGTGATCACCGCATCTGAAAACGTATCCGGTACCCTGTTC TTCGAAATCGGTGAAACCGTTTGGGGTCAGGAAGGCGACAACGACAACATCGGTCAGGGCGCAGGCGGCGCACTGGGCAC CGACGGCGTGAACGTTGAAACCCGTCGTGCTTACATCGACTTCACCGTGCCCAATACCGAACTGAAGGTTCGTATGGGTC TGCAGGGTCTGGCACTGCCTTCCGCTGTTGCCGGCAACCCCGTGATGGACGACGACGTGGCAGCCATCGTGGCTTCCTAC GCCTTCAACGACATGTTCAGCCTGACCGGCTTCTGGGCACGTCCTGCTGACACCAACGGTGGCGACGCCTACGACACCGT CAACCTCAACCGGAAGAACCTCAACGACGAGTTCGACATGGCCGGCCTGGTGCTGGGCGTGAAGGGCGACGGCTACACCT TCGATCCTTACTTCTCCTACGCCTGGATCGGTAAGGACGTTAACGGCGCTGCCGACGACCTGACCGCTTGGTGGGCCGGT GCTGCTTTCGAACTGACCATGTTCGACCCCATCGTGTTCTCCGCTGATGCTATCTACGGCGACACCGACGGTGGCGACGT TGAAGCTAACGACGCTACCGGCTGGTTCCTGACCGGTAAGCTGAGCTACAAGATGGATATGTTCACCCCCGGCGTTATCG CTTGGTACGCCACCGGTGAAGACGACGACGCAGCCGACGGTTCCGAGCGTCTGCCCGTTATCTCCCCCGCAGGCTTTGCC CCCACCAGCTTCGGCTTTGACGGCGCTGCCGGCATCCTTGACGGTGCTATCCTTTCCGCTACCGGTACCGGCACCTGGGG TGTTGCTCTGGTTGCTGAAGACATCCAGTTCATCGAAAACGTTTCCCACGTTGTGCGCGTTGCCTACATCAAGGGCACCA ACGACGAAAAGAGCTTCGCTAAGGGCATGATCGAATTCGGCGACCTGACCGAAGAAGACAGCGCTTGGGAAGTTAACTTC GACACCAACTACCAGATTTACGAAAACCTTTCCGCAGCCATCGAACTCGGCTGGGTGAAGCTGGACCTCGACGAAAGCGT CTGGGGTGCCGCCGACGACACCGACGATGCATGGAAGGCTGGCGTAAACCTGACCTACAGCTTCTAA
Upstream 100 bases:
>100_bases CACGTGCCGGACGACTGCGCTAAACCTGCATGTATCGATTCAATTAAGGTCATCCGCATCAGGAACGACGTTTTTCGCAA AAGAAGGAAGGAAGAAAGAA
Downstream 100 bases:
>100_bases GCTGTTCTGTTCCTGATGCTTTTGACGCCGGAGGCCGCAAGGCCTCCGGCTTTTTTTGCGTTCTGCCGCGTTGTTGGCAC AACCGCCGGACGCAGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKRIATLLLAAAFVFGTVAAGSAAEFKTTGQFDFGFQWTDNTGFQDAKKAGASEDDFDVRQRVRVQTVITASENVSGTLF FEIGETVWGQEGDNDNIGQGAGGALGTDGVNVETRRAYIDFTVPNTELKVRMGLQGLALPSAVAGNPVMDDDVAAIVASY AFNDMFSLTGFWARPADTNGGDAYDTVNLNRKNLNDEFDMAGLVLGVKGDGYTFDPYFSYAWIGKDVNGAADDLTAWWAG AAFELTMFDPIVFSADAIYGDTDGGDVEANDATGWFLTGKLSYKMDMFTPGVIAWYATGEDDDAADGSERLPVISPAGFA PTSFGFDGAAGILDGAILSATGTGTWGVALVAEDIQFIENVSHVVRVAYIKGTNDEKSFAKGMIEFGDLTEEDSAWEVNF DTNYQIYENLSAAIELGWVKLDLDESVWGAADDTDDAWKAGVNLTYSF
Sequences:
>Translated_448_residues MKRIATLLLAAAFVFGTVAAGSAAEFKTTGQFDFGFQWTDNTGFQDAKKAGASEDDFDVRQRVRVQTVITASENVSGTLF FEIGETVWGQEGDNDNIGQGAGGALGTDGVNVETRRAYIDFTVPNTELKVRMGLQGLALPSAVAGNPVMDDDVAAIVASY AFNDMFSLTGFWARPADTNGGDAYDTVNLNRKNLNDEFDMAGLVLGVKGDGYTFDPYFSYAWIGKDVNGAADDLTAWWAG AAFELTMFDPIVFSADAIYGDTDGGDVEANDATGWFLTGKLSYKMDMFTPGVIAWYATGEDDDAADGSERLPVISPAGFA PTSFGFDGAAGILDGAILSATGTGTWGVALVAEDIQFIENVSHVVRVAYIKGTNDEKSFAKGMIEFGDLTEEDSAWEVNF DTNYQIYENLSAAIELGWVKLDLDESVWGAADDTDDAWKAGVNLTYSF >Mature_448_residues MKRIATLLLAAAFVFGTVAAGSAAEFKTTGQFDFGFQWTDNTGFQDAKKAGASEDDFDVRQRVRVQTVITASENVSGTLF FEIGETVWGQEGDNDNIGQGAGGALGTDGVNVETRRAYIDFTVPNTELKVRMGLQGLALPSAVAGNPVMDDDVAAIVASY AFNDMFSLTGFWARPADTNGGDAYDTVNLNRKNLNDEFDMAGLVLGVKGDGYTFDPYFSYAWIGKDVNGAADDLTAWWAG AAFELTMFDPIVFSADAIYGDTDGGDVEANDATGWFLTGKLSYKMDMFTPGVIAWYATGEDDDAADGSERLPVISPAGFA PTSFGFDGAAGILDGAILSATGTGTWGVALVAEDIQFIENVSHVVRVAYIKGTNDEKSFAKGMIEFGDLTEEDSAWEVNF DTNYQIYENLSAAIELGWVKLDLDESVWGAADDTDDAWKAGVNLTYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47977; Mature: 47977
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIATLLLAAAFVFGTVAAGSAAEFKTTGQFDFGFQWTDNTGFQDAKKAGASEDDFDVR CHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEECCEEECCCCCCHHHHHCCCCCCCHHHH QRVRVQTVITASENVSGTLFFEIGETVWGQEGDNDNIGQGAGGALGTDGVNVETRRAYID HHEEEEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE FTVPNTELKVRMGLQGLALPSAVAGNPVMDDDVAAIVASYAFNDMFSLTGFWARPADTNG EECCCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCC GDAYDTVNLNRKNLNDEFDMAGLVLGVKGDGYTFDPYFSYAWIGKDVNGAADDLTAWWAG CCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEECCCCCCCHHHHHHHHCC AAFELTMFDPIVFSADAIYGDTDGGDVEANDATGWFLTGKLSYKMDMFTPGVIAWYATGE CEEEEEEECCEEEECCEEECCCCCCCEECCCCCEEEEEEEEEEEEECCCCCEEEEEECCC DDDAADGSERLPVISPAGFAPTSFGFDGAAGILDGAILSATGTGTWGVALVAEDIQFIEN CCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCEEEEHHHHHHHHHH VSHVVRVAYIKGTNDEKSFAKGMIEFGDLTEEDSAWEVNFDTNYQIYENLSAAIELGWVK HHHEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHCCCEEEEEEEEE LDLDESVWGAADDTDDAWKAGVNLTYSF EECCCCCCCCCCCCCCHHHCCCEEEEEC >Mature Secondary Structure MKRIATLLLAAAFVFGTVAAGSAAEFKTTGQFDFGFQWTDNTGFQDAKKAGASEDDFDVR CHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEECCEEECCCCCCHHHHHCCCCCCCHHHH QRVRVQTVITASENVSGTLFFEIGETVWGQEGDNDNIGQGAGGALGTDGVNVETRRAYID HHEEEEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE FTVPNTELKVRMGLQGLALPSAVAGNPVMDDDVAAIVASYAFNDMFSLTGFWARPADTNG EECCCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCC GDAYDTVNLNRKNLNDEFDMAGLVLGVKGDGYTFDPYFSYAWIGKDVNGAADDLTAWWAG CCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEECCCCCCCHHHHHHHHCC AAFELTMFDPIVFSADAIYGDTDGGDVEANDATGWFLTGKLSYKMDMFTPGVIAWYATGE CEEEEEEECCEEEECCEEECCCCCCCEECCCCCEEEEEEEEEEEEECCCCCEEEEEECCC DDDAADGSERLPVISPAGFAPTSFGFDGAAGILDGAILSATGTGTWGVALVAEDIQFIEN CCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCEEEEHHHHHHHHHH VSHVVRVAYIKGTNDEKSFAKGMIEFGDLTEEDSAWEVNFDTNYQIYENLSAAIELGWVK HHHEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHCCCEEEEEEEEE LDLDESVWGAADDTDDAWKAGVNLTYSF EECCCCCCCCCCCCCCHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA