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The map label for this gene is aprF [H]

Identifier: 78356008

GI number: 78356008

Start: 984980

End: 986455

Strand: Direct

Name: aprF [H]

Synonym: Dde_0961

Alternate gene names: 78356008

Gene position: 984980-986455 (Clockwise)

Preceding gene: 78356007

Following gene: 78356009

Centisome position: 26.41

GC content: 54.27

Gene sequence:

>1476_bases
ATGAAAAAAGCCTTAAGGATAACAGCTCGCACCATGGTTATGCTTCTGGTGGGAGGTGGATTGCTGCTGACAGCGGGTTG
TATTTCTATTAGCGCTGCCGCCGAGCCGTTGCACGGCCATTCCGATGCAATCGCCGAAAAATCGCCGGAAATAGAAGGCA
ATCGTCCCTCTGCTCCCGTTGAGGAGCTTCGCAAGCTCGAAAAGGATGGCAATATACACCTTTCGTTAAGCGATTGCCTG
AAAATAGCGTTGCAACAGAATTACGATATCCGCCTTACACGGGAAGCCCTGACTCAAGCCAATACAAAGATAACTCAGGC
CAGATCGGCTATGCTCCCATTTTTGGGGGCGGAGGCTTCCTATACACGACTGGACGAGGAGTTGAGTTTTGCAATGGGAC
CGCAATCATTGACCTTCATGGATCGTGATCAATACAAGGCGGGGCTCGTCATCCGGCAGCCCATTTTCACGGGAGGGCGA
TTGAATGCGGCGCGCAAGGCATCCCAGTATTCACGAGACGCTCAAGCTCAAGAGAACAGGGCCGTTGAAGAGGAAGTCGT
TTTCCAGGTTACACGCGCTTATCGGACCGCACAGTTGGCCGAAGCGTTTCAAGGTGTTGCCGTGGAGGCCGTCGATCTTC
TCAATGTGCATGAACATGACGTGGCGATTCTGGTGGAGAAAGGGGCGAATCCGGAAATTGACCTGCTTCGCACCCGAACG
GAACTTGCCAATGCCCGCAAAGATCTGAATGGCGCTGACAACGCCGTCGACCTGGCATATTCTGCACTTAAGAACTTGCT
GAGCATGCCCCTTGAAGAATCAGTCCGTTTGACGGAAGCCTTGGTGCGGTCGCCCGGGCCGGGGGCGGATCTTTCGTCTC
TCACCGAGTTGGCCCTTTCGCAACGTCCCGAACTGTCTGCAATGGATTCCAAAATGGCAGCTGCGGAGCAGGCGCTTAAA
GCGGCCAGGGGAGAATACCTGCCTACCATTGCCCTGGAAGGGCGTTACGAATATATGGAAGGCGATTTTCGGGATCTGGA
AGGCGGAGAGCATTGGACGGTTGGAATAGGGGCGCAGTTTCCCCTCTGGAATTGGGGGAAAACCGCTGCCAAGGTCAGAG
AGGCGGGATCGCAACGGGCTCAGGTAAAAATCCAGCGAGATAAAACGACAGATCGCATTCGTCTTGAAGTGCGCCAAGCC
TTCCTGGACCTCGGAAAAGCAGAAAAGAATATCGATGCGGCTGAGAGTGCACTGAAGACAGCCAGGGAGGCTTACCGCCT
GGCAAGAGCCAGCTACCGGGCAGGAGAAGGCACAAATACCGACGTGCTGGACGTTCGTACGGCCTTAAGTCGAGCTGAAG
CGAATCACACACAGGCTCTTTTTGATTACAACGTTGCCCTTGCCGCCCTTCATCGAGCGGTGGGCGTAATGGTGATAGAG
CCGCCTGATATCAAGGAAAAGGAGTCTGCCGAATGA

Upstream 100 bases:

>100_bases
ACGCTTTTCTCTTCTGTTGGCTGGAAGATCCGGAACGGCATTCATACAAGGCGAATGCCCCGGTGATCAGTGACATGTTT
CTCAAAGGGGTGATGGCCGA

Downstream 100 bases:

>100_bases
GACGAAGAGGAGTCTATATATCCATTGCTATTGCGGCTGCTGTTATTGCGTTCTTGGCTGTCCAAGTTTCCAGGAAGCAA
TGGCAAAAAGATGAAGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MKKALRITARTMVMLLVGGGLLLTAGCISISAAAEPLHGHSDAIAEKSPEIEGNRPSAPVEELRKLEKDGNIHLSLSDCL
KIALQQNYDIRLTREALTQANTKITQARSAMLPFLGAEASYTRLDEELSFAMGPQSLTFMDRDQYKAGLVIRQPIFTGGR
LNAARKASQYSRDAQAQENRAVEEEVVFQVTRAYRTAQLAEAFQGVAVEAVDLLNVHEHDVAILVEKGANPEIDLLRTRT
ELANARKDLNGADNAVDLAYSALKNLLSMPLEESVRLTEALVRSPGPGADLSSLTELALSQRPELSAMDSKMAAAEQALK
AARGEYLPTIALEGRYEYMEGDFRDLEGGEHWTVGIGAQFPLWNWGKTAAKVREAGSQRAQVKIQRDKTTDRIRLEVRQA
FLDLGKAEKNIDAAESALKTAREAYRLARASYRAGEGTNTDVLDVRTALSRAEANHTQALFDYNVALAALHRAVGVMVIE
PPDIKEKESAE

Sequences:

>Translated_491_residues
MKKALRITARTMVMLLVGGGLLLTAGCISISAAAEPLHGHSDAIAEKSPEIEGNRPSAPVEELRKLEKDGNIHLSLSDCL
KIALQQNYDIRLTREALTQANTKITQARSAMLPFLGAEASYTRLDEELSFAMGPQSLTFMDRDQYKAGLVIRQPIFTGGR
LNAARKASQYSRDAQAQENRAVEEEVVFQVTRAYRTAQLAEAFQGVAVEAVDLLNVHEHDVAILVEKGANPEIDLLRTRT
ELANARKDLNGADNAVDLAYSALKNLLSMPLEESVRLTEALVRSPGPGADLSSLTELALSQRPELSAMDSKMAAAEQALK
AARGEYLPTIALEGRYEYMEGDFRDLEGGEHWTVGIGAQFPLWNWGKTAAKVREAGSQRAQVKIQRDKTTDRIRLEVRQA
FLDLGKAEKNIDAAESALKTAREAYRLARASYRAGEGTNTDVLDVRTALSRAEANHTQALFDYNVALAALHRAVGVMVIE
PPDIKEKESAE
>Mature_491_residues
MKKALRITARTMVMLLVGGGLLLTAGCISISAAAEPLHGHSDAIAEKSPEIEGNRPSAPVEELRKLEKDGNIHLSLSDCL
KIALQQNYDIRLTREALTQANTKITQARSAMLPFLGAEASYTRLDEELSFAMGPQSLTFMDRDQYKAGLVIRQPIFTGGR
LNAARKASQYSRDAQAQENRAVEEEVVFQVTRAYRTAQLAEAFQGVAVEAVDLLNVHEHDVAILVEKGANPEIDLLRTRT
ELANARKDLNGADNAVDLAYSALKNLLSMPLEESVRLTEALVRSPGPGADLSSLTELALSQRPELSAMDSKMAAAEQALK
AARGEYLPTIALEGRYEYMEGDFRDLEGGEHWTVGIGAQFPLWNWGKTAAKVREAGSQRAQVKIQRDKTTDRIRLEVRQA
FLDLGKAEKNIDAAESALKTAREAYRLARASYRAGEGTNTDVLDVRTALSRAEANHTQALFDYNVALAALHRAVGVMVIE
PPDIKEKESAE

Specific function: Involved in the secretion of alkaline protease [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53765; Mature: 53765

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALRITARTMVMLLVGGGLLLTAGCISISAAAEPLHGHSDAIAEKSPEIEGNRPSAPV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCH
EELRKLEKDGNIHLSLSDCLKIALQQNYDIRLTREALTQANTKITQARSAMLPFLGAEAS
HHHHHHHCCCCEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCH
YTRLDEELSFAMGPQSLTFMDRDQYKAGLVIRQPIFTGGRLNAARKASQYSRDAQAQENR
HHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVEEEVVFQVTRAYRTAQLAEAFQGVAVEAVDLLNVHEHDVAILVEKGANPEIDLLRTRT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH
ELANARKDLNGADNAVDLAYSALKNLLSMPLEESVRLTEALVRSPGPGADLSSLTELALS
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QRPELSAMDSKMAAAEQALKAARGEYLPTIALEGRYEYMEGDFRDLEGGEHWTVGIGAQF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCCCEEEEEECCCC
PLWNWGKTAAKVREAGSQRAQVKIQRDKTTDRIRLEVRQAFLDLGKAEKNIDAAESALKT
CCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHH
AREAYRLARASYRAGEGTNTDVLDVRTALSRAEANHTQALFDYNVALAALHRAVGVMVIE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEC
PPDIKEKESAE
CCCCCCCCCCC
>Mature Secondary Structure
MKKALRITARTMVMLLVGGGLLLTAGCISISAAAEPLHGHSDAIAEKSPEIEGNRPSAPV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCH
EELRKLEKDGNIHLSLSDCLKIALQQNYDIRLTREALTQANTKITQARSAMLPFLGAEAS
HHHHHHHCCCCEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCH
YTRLDEELSFAMGPQSLTFMDRDQYKAGLVIRQPIFTGGRLNAARKASQYSRDAQAQENR
HHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVEEEVVFQVTRAYRTAQLAEAFQGVAVEAVDLLNVHEHDVAILVEKGANPEIDLLRTRT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH
ELANARKDLNGADNAVDLAYSALKNLLSMPLEESVRLTEALVRSPGPGADLSSLTELALS
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QRPELSAMDSKMAAAEQALKAARGEYLPTIALEGRYEYMEGDFRDLEGGEHWTVGIGAQF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCCCEEEEEECCCC
PLWNWGKTAAKVREAGSQRAQVKIQRDKTTDRIRLEVRQAFLDLGKAEKNIDAAESALKT
CCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHH
AREAYRLARASYRAGEGTNTDVLDVRTALSRAEANHTQALFDYNVALAALHRAVGVMVIE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEC
PPDIKEKESAE
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1427098; 10984043 [H]