| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355994
Identifier: 78355994
GI number: 78355994
Start: 971621
End: 973030
Strand: Direct
Name: 78355994
Synonym: Dde_0947
Alternate gene names: NA
Gene position: 971621-973030 (Clockwise)
Preceding gene: 78355993
Following gene: 78355995
Centisome position: 26.05
GC content: 65.25
Gene sequence:
>1410_bases ATGGGCCGCGCAAGCATCGGATACATCAACAAGGATTACGAATCGATCCGCCAGGAGCTGTTGGCGAAGATCCCGCAGCT CACCGACCGCTGGACCGATTTCAACCACTCCGATCTCGGCGTCGTCCTGCTCGATCTGTTCTGCGGCGTGGGCGACATGC TGGCCTACTACCTGGACGCCCAGGCGGCGGAGGCCTTTCTGCCCACGGCCCGCCAGCGCCAGAACGTCATCAACCTCTGC AAGCTCATTGGCTACCGGCTGGATTCGCCGGTGGCCTCCACCACCACGCTGCGTTTCCGCATCTCCGCCCCGCTCGGCAA GGACCTGACCATTCCGGCGGGGACGGCCTGCCGCGCCTTGCTGAGTGACGGCGAGGCGGATTTCGAGACGGTCGAGGATG GCCTGCTCCCGCGAGGCGTGCTCTCGGTGGACATCCCGGCCCGTCAAGGCGAGCGCCGCACCGAGACCTTCACGTCGTCG GGGCTGCCATTCCAGCGCATCCGCCTGACCGGCGACGTCATCGCCCAGGGCTCCATCACCGTTACTGTTGGGGACGACGC CTGGAGCGAGGTCGATCATTTCCAGGACAGCCTGGCCGACAGCCGCCATTTCATGGCCGACCTCGACGCCCTCGACATCT CCACCCTGATTTTCGGCGACGGGCAAAGCGGCGCTGTACCCGCTCAGGGAAGCGCCATCACCGTCAGCTATCTGCAGACC ATCGGAGACCAGGGCAATCTCGGTTCGAACCGGATCACCCAACTGCTGAGCCCGGTCTACCTCGACGGCGGCCAGGTTTC CCTGACCGTCACCAACCCGGTGCCTTCCACCGGAGGAGCGTCGCGGGAAGCCCTCGAACATGCCCGCCGACAGGCACCGG CGGAGCTGCGCAGTCTCTGGAAAGCCGTCACCCTGGAGGATTACCAGGCGCTCGCCGAAGGTTACCCCGGCGTCGCCAAG GCCAAGGTGCTCGACACCAATGCCTGCCAGAACATCCGCTATTACAACGTTCAACTGGCCATCGCCCCCAACGGCGGCGG AATGCCCTCGGCGCTGCTCAAGCGGGACCTCGCCGAGTTCCTCGAACGCCGCAAGGTCATCACGGTCGAGATCAACCTGT TCGACCCGATCTACCGCCCCGTTTCCATCGACGCCGAGGTCTACGTCTGGCCCGGTGAACCGCTGGAAAACGTGCGCAGC CGCATCGAAGCCGCGCTCACCGATTTCTTTTCCTTCGAGCGGGTCTCCTTCGGGCAGACCATCCACTTCTCCGACCTGGT GGCCCTGATCGACGGCGTGCGCGGCGTCAGCCACATGCATCTCTACGCGCCGCAGCAGGACATCGAGCTGCGCCACGGCG AAATCCCGGTTCTCGGCACGGTCAACCTCGATCTGCGGAGGGCCGGGTGA
Upstream 100 bases:
>100_bases AGGCATCCCGCCTCCGACACATCCAGGCCCCTTCCGGTAAGTAACCGGCGTGGCGAGAGCATCAGGCGCTCTCGCATAAC CGCCGAAAACCGGAGAGACC
Downstream 100 bases:
>100_bases TGGCGGATTGGTTCAAGGACAATCTGCTCGGCCTGCTGCCGCCGCTTTACGAGCACAACGACGAGGCCGGTGACCTGCGC ACCTTTCTGAGCCTTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MGRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDAQAAEAFLPTARQRQNVINLC KLIGYRLDSPVASTTTLRFRISAPLGKDLTIPAGTACRALLSDGEADFETVEDGLLPRGVLSVDIPARQGERRTETFTSS GLPFQRIRLTGDVIAQGSITVTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAITVSYLQT IGDQGNLGSNRITQLLSPVYLDGGQVSLTVTNPVPSTGGASREALEHARRQAPAELRSLWKAVTLEDYQALAEGYPGVAK AKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEFLERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRS RIEAALTDFFSFERVSFGQTIHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGTVNLDLRRAG
Sequences:
>Translated_469_residues MGRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDAQAAEAFLPTARQRQNVINLC KLIGYRLDSPVASTTTLRFRISAPLGKDLTIPAGTACRALLSDGEADFETVEDGLLPRGVLSVDIPARQGERRTETFTSS GLPFQRIRLTGDVIAQGSITVTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAITVSYLQT IGDQGNLGSNRITQLLSPVYLDGGQVSLTVTNPVPSTGGASREALEHARRQAPAELRSLWKAVTLEDYQALAEGYPGVAK AKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEFLERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRS RIEAALTDFFSFERVSFGQTIHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGTVNLDLRRAG >Mature_468_residues GRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDAQAAEAFLPTARQRQNVINLCK LIGYRLDSPVASTTTLRFRISAPLGKDLTIPAGTACRALLSDGEADFETVEDGLLPRGVLSVDIPARQGERRTETFTSSG LPFQRIRLTGDVIAQGSITVTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAITVSYLQTI GDQGNLGSNRITQLLSPVYLDGGQVSLTVTNPVPSTGGASREALEHARRQAPAELRSLWKAVTLEDYQALAEGYPGVAKA KVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEFLERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRSR IEAALTDFFSFERVSFGQTIHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGTVNLDLRRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51236; Mature: 51104
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHH QAAEAFLPTARQRQNVINLCKLIGYRLDSPVASTTTLRFRISAPLGKDLTIPAGTACRAL HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHH LSDGEADFETVEDGLLPRGVLSVDIPARQGERRTETFTSSGLPFQRIRLTGDVIAQGSIT HCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCEEECCEEE VTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAITVSYLQT EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEHHHHHH IGDQGNLGSNRITQLLSPVYLDGGQVSLTVTNPVPSTGGASREALEHARRQAPAELRSLW CCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHH KAVTLEDYQALAEGYPGVAKAKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEF HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHH LERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRSRIEAALTDFFSFERVSFGQT HHCCCEEEEEEEECCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCE IHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGTVNLDLRRAG ECHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCEEEEEEEEEECCC >Mature Secondary Structure GRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHH QAAEAFLPTARQRQNVINLCKLIGYRLDSPVASTTTLRFRISAPLGKDLTIPAGTACRAL HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHH LSDGEADFETVEDGLLPRGVLSVDIPARQGERRTETFTSSGLPFQRIRLTGDVIAQGSIT HCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCEEECCEEE VTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAITVSYLQT EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEHHHHHH IGDQGNLGSNRITQLLSPVYLDGGQVSLTVTNPVPSTGGASREALEHARRQAPAELRSLW CCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHH KAVTLEDYQALAEGYPGVAKAKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEF HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHH LERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRSRIEAALTDFFSFERVSFGQT HHCCCEEEEEEEECCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCE IHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGTVNLDLRRAG ECHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA